Information for 21-CTTTAGTGCC (Motif 33)

A G T C A C G T A C G T A C G T C G T A A C T G A C G T A C T G A G T C G T A C
Reverse Opposite:
A C T G A C T G A G T C C G T A A G T C A C G T C G T A C G T A C G T A A C T G
p-value:1e-5
log p-value:-1.334e+01
Information Content per bp:1.960
Number of Target Sequences with motif5.0
Percentage of Target Sequences with motif0.57%
Number of Background Sequences with motif10.3
Percentage of Background Sequences with motif0.02%
Average Position of motif in Targets31.6 +/- 33.3bp
Average Position of motif in Background59.3 +/- 25.3bp
Strand Bias (log2 ratio + to - strand density)0.6
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Nkx2.1(Homeobox)/LungAC-Nkx2.1-ChIP-Seq(GSE43252)/Homer

Match Rank:1
Score:0.70
Offset:0
Orientation:reverse strand
Alignment:CTTTAGTGCC
CTYRAGTGSY
 A G T C A C G T A C G T A C G T C G T A A C T G A C G T A C T G A G T C G T A C
A T G C G C A T A G C T C T A G C G T A A C T G C G A T C T A G A T G C G A T C

Nkx2-5(var.2)/MA0503.1/Jaspar

Match Rank:2
Score:0.70
Offset:0
Orientation:reverse strand
Alignment:CTTTAGTGCC-
CTTGAGTGGCT
 A G T C A C G T A C G T A C G T C G T A A C T G A C G T A C T G A G T C G T A C A C G T
A T G C G A C T C A G T C T A G C G T A A C T G C G A T A C T G A T C G G A T C G A C T

Nkx2.2(Homeobox)/NPC-Nkx2.2-ChIP-Seq(GSE61673)/Homer

Match Rank:3
Score:0.69
Offset:0
Orientation:forward strand
Alignment:CTTTAGTGCC
BTBRAGTGSN
 A G T C A C G T A C G T A C G T C G T A A C T G A C G T A C T G A G T C G T A C
A T G C G A C T A G C T C T A G C G T A C T A G C G A T C T A G A T C G G A T C

ISL2/MA0914.1/Jaspar

Match Rank:4
Score:0.67
Offset:1
Orientation:reverse strand
Alignment:CTTTAGTGCC
-TTAAGTGC-
 A G T C A C G T A C G T A C G T C G T A A C T G A C G T A C T G A G T C G T A C
A C G T G A C T C G A T C T G A G C T A C A T G C G A T C T A G A T G C A C G T

Nkx2.5(Homeobox)/HL1-Nkx2.5.biotin-ChIP-Seq(GSE21529)/Homer

Match Rank:5
Score:0.67
Offset:1
Orientation:reverse strand
Alignment:CTTTAGTGCC-
-TTGAGTGSTT
 A G T C A C G T A C G T A C G T C G T A A C T G A C G T A C T G A G T C G T A C A C G T
A C G T G C A T A C G T C T A G C G T A C A T G C G A T C T A G A T C G G A C T G A C T

Nkx3.1(Homeobox)/LNCaP-Nkx3.1-ChIP-Seq(GSE28264)/Homer

Match Rank:6
Score:0.66
Offset:1
Orientation:reverse strand
Alignment:CTTTAGTGCC-
-TTAAGTGCTT
 A G T C A C G T A C G T A C G T C G T A A C T G A C G T A C T G A G T C G T A C A C G T
A C G T A C G T C A G T T C G A C G T A A C T G A C G T C T A G A T G C A G C T A G C T

ZNF264(Zf)/HEK293-ZNF264.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:7
Score:0.65
Offset:0
Orientation:reverse strand
Alignment:CTTTAGTGCC--
RGTTAGTGCCCY
 A G T C A C G T A C G T A C G T C G T A A C T G A C G T A C T G A G T C G T A C A C G T A C G T
C T G A C T A G A C G T G A C T G T C A A C T G A G C T A C T G A T G C G T A C G T A C A G C T

CDX2/MA0465.1/Jaspar

Match Rank:8
Score:0.64
Offset:0
Orientation:reverse strand
Alignment:CTTTAGTGCC-
TTTTATGGCTN
 A G T C A C G T A C G T A C G T C G T A A C T G A C G T A C T G A G T C G T A C A C G T
A G C T A C G T A C G T A C G T C G T A A C G T C A T G C T A G A G T C G A C T A G C T

NKX3-2/MA0122.2/Jaspar

Match Rank:9
Score:0.64
Offset:1
Orientation:reverse strand
Alignment:CTTTAGTGCC
-TTAAGTGGN
 A G T C A C G T A C G T A C G T C G T A A C T G A C G T A C T G A G T C G T A C
A C G T G A C T C G A T C T G A T C G A C A T G C G A T C T A G A T C G A G C T

Bapx1(Homeobox)/VertebralCol-Bapx1-ChIP-Seq(GSE36672)/Homer

Match Rank:10
Score:0.63
Offset:1
Orientation:forward strand
Alignment:CTTTAGTGCC-
-TTRAGTGSYK
 A G T C A C G T A C G T A C G T C G T A A C T G A C G T A C T G A G T C G T A C A C G T
A C G T A G C T G A C T C T A G C G T A C A T G C G A T C T A G A T C G G A C T C A G T