Information for 8-TCATTCATGC (Motif 17)

A G C T G T A C C G T A A G C T A C G T A G T C C G T A C A G T A C T G G T A C
Reverse Opposite:
A C T G A G T C G T C A A C G T A C T G T G C A C T G A A C G T A C T G C T G A
p-value:1e-11
log p-value:-2.576e+01
Information Content per bp:1.856
Number of Target Sequences with motif20.0
Percentage of Target Sequences with motif2.29%
Number of Background Sequences with motif140.7
Percentage of Background Sequences with motif0.30%
Average Position of motif in Targets57.0 +/- 29.8bp
Average Position of motif in Background54.5 +/- 29.3bp
Strand Bias (log2 ratio + to - strand density)-0.9
Multiplicity (# of sites on avg that occur together)1.05
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0178.1_Sox8_2/Jaspar

Match Rank:1
Score:0.81
Offset:0
Orientation:forward strand
Alignment:TCATTCATGC----
ACATTCATGACACG
 A G C T G T A C C G T A A G C T A C G T A G T C C G T A C A G T A C T G G T A C A C G T A C G T A C G T A C G T
C G T A G A T C G C T A A C G T C G A T G A T C T C G A A C G T C T A G G C T A G T A C G T C A A T G C T A C G

PB0170.1_Sox17_2/Jaspar

Match Rank:2
Score:0.77
Offset:-4
Orientation:forward strand
Alignment:----TCATTCATGC---
GACCACATTCATACAAT
 A C G T A C G T A C G T A C G T A G C T G T A C C G T A A G C T A C G T A G T C C G T A C A G T A C T G G T A C A C G T A C G T A C G T
T A C G G C T A A G T C G T A C G T C A A G T C G C T A A G C T C G A T T G A C C T G A A G C T T C G A G A T C T C G A C G T A C G A T

PB0028.1_Hbp1_1/Jaspar

Match Rank:3
Score:0.75
Offset:-5
Orientation:reverse strand
Alignment:-----TCATTCATGC-
NNCATTCATTCATNNN
 A C G T A C G T A C G T A C G T A C G T A G C T G T A C C G T A A G C T A C G T A G T C C G T A C A G T A C T G G T A C A C G T
T C G A G A C T G T A C C G T A A G C T G A C T T G A C C G T A C G A T G C A T A T G C C G T A C G A T G C T A A C T G C G A T

PAX6(Paired,Homeobox)/Forebrain-Pax6-ChIP-Seq(GSE66961)/Homer

Match Rank:4
Score:0.65
Offset:-5
Orientation:forward strand
Alignment:-----TCATTCATGC-----
NGTGTTCAVTSAAGCGKAAA
 A C G T A C G T A C G T A C G T A C G T A G C T G T A C C G T A A G C T A C G T A G T C C G T A C A G T A C T G G T A C A C G T A C G T A C G T A C G T A C G T
A G C T T A C G C G A T T C A G A G C T A C G T G A T C C T G A T A G C A G C T A T G C C T G A C G T A A T C G A G T C C T A G A C T G C T G A G T C A T C G A

Pax8(Paired,Homeobox)/Thyroid-Pax8-ChIP-Seq(GSE26938)/Homer

Match Rank:5
Score:0.64
Offset:0
Orientation:reverse strand
Alignment:TCATTCATGC-----
SCAGYCADGCATGAC
 A G C T G T A C C G T A A G C T A C G T A G T C C G T A C A G T A C T G G T A C A C G T A C G T A C G T A C G T A C G T
A T C G G T A C C G T A A T C G A G C T A T G C C G T A C T A G A T C G A G T C T C G A C A G T T C A G T C G A T G A C

FOS/MA0476.1/Jaspar

Match Rank:6
Score:0.63
Offset:-2
Orientation:forward strand
Alignment:--TCATTCATGC
TGTGACTCATT-
 A C G T A C G T A G C T G T A C C G T A A G C T A C G T A G T C C G T A C A G T A C T G G T A C
C A G T T A C G A C G T A C T G C G T A A T G C A C G T A G T C C G T A A G C T A G C T A C G T

PH0150.1_Pou4f3/Jaspar

Match Rank:7
Score:0.63
Offset:-4
Orientation:reverse strand
Alignment:----TCATTCATGC--
GACNTCATTAATAANN
 A C G T A C G T A C G T A C G T A G C T G T A C C G T A A G C T A C G T A G T C C G T A C A G T A C T G G T A C A C G T A C G T
C T A G C T G A T G A C G A T C C A G T G T A C C G T A C G A T C G A T C G T A C T G A C G A T C G T A G T C A A G T C C G A T

FOS::JUN/MA0099.2/Jaspar

Match Rank:8
Score:0.63
Offset:0
Orientation:reverse strand
Alignment:TCATTCATGC
TGAGTCA---
 A G C T G T A C C G T A A G C T A C G T A G T C C G T A C A G T A C T G G T A C
G A C T A T C G G C T A A C T G A C G T G T A C C T G A A C G T A C G T A C G T

OCT:OCT(POU,Homeobox,IR1)/NPC-Brn2-ChIP-Seq(GSE35496)/Homer

Match Rank:9
Score:0.63
Offset:-5
Orientation:forward strand
Alignment:-----TCATTCATGC
ATGAATWATTCATGA
 A C G T A C G T A C G T A C G T A C G T A G C T G T A C C G T A A G C T A C G T A G T C C G T A C A G T A C T G G T A C
G T C A A C G T C T A G G T C A C G T A G C A T C G T A C G T A G C A T C A G T A G T C C G T A C A G T C T A G C T G A

TEAD2(TEA)/Py2T-Tead2-ChIP-Seq(GSE55709)/Homer

Match Rank:10
Score:0.62
Offset:0
Orientation:reverse strand
Alignment:TCATTCATGC
RCATTCCWGG
 A G C T G T A C C G T A A G C T A C G T A G T C C G T A C A G T A C T G G T A C
C T G A T G A C C T G A A C G T C G A T A G T C A G T C G C T A C T A G T A C G