Homer de novo Motif Results (hs_HepatocellularCarcinoma_HepG2_cancer_MAX_SRX150486_homermotifs_10_13_16/)

Known Motif Enrichment Results
Gene Ontology Enrichment Results
If Homer is having trouble matching a motif to a known motif, try copy/pasting the matrix file into STAMP
More information on motif finding results: HOMER | Description of Results | Tips
Total target sequences = 879
Total background sequences = 32074
* - possible false positive
RankMotifP-valuelog P-pvalue% of Targets% of Background STD(Bg STD) Best Match/DetailsMotif File
1 T C A G A T G C A G T C C G T A A G T C C T A G A C G T A C T G T C A G A G T C G A T C A T C G T C A G 1e-108-2.501e+0230.26%6.02%19.6bp (37.8bp)n-Myc(bHLH)/mES-nMyc-ChIP-Seq(GSE11431)/Homer(0.979)
More Information | Similar Motifs Found
motif file (matrix)
2 A G T C A G T C G C T A A T G C A T G C C G T A A T C G T A C G C A G T A C T G A C T G G T A C T C A G 1e-24-5.737e+015.35%0.72%25.3bp (32.4bp)BORIS(Zf)/K562-CTCFL-ChIP-Seq(GSE32465)/Homer(0.866)
More Information | Similar Motifs Found
motif file (matrix)
3 A T G C C A G T C A T G C T G A G A T C A G T C A G C T G A C T G C A T A T C G 1e-18-4.308e+0110.24%3.45%26.6bp (30.2bp)Erra(NR)/HepG2-Erra-ChIP-Seq(GSE31477)/Homer(0.956)
More Information | Similar Motifs Found
motif file (matrix)
4 G C A T A G T C A C G T A C T G A C G T A C T G A G C T A C G T A C T G A G C T A T C G A C G T G T C A 1e-14-3.375e+010.80%0.01%24.8bp (0.0bp)Hand2(bHLH)/Mesoderm-Hand2-ChIP-Seq(GSE61475)/Homer(0.630)
More Information | Similar Motifs Found
motif file (matrix)
5 A G T C A T C G C G T A C A T G A C T G T C G A A G T C A C G T A C G T T A C G A G C T A C T G A C T G A C T G C G T A C T A G 1e-14-3.375e+010.80%0.00%28.8bp (8.1bp)ZNF143|STAF(Zf)/CUTLL-ZNF143-ChIP-Seq(GSE29600)/Homer(0.721)
More Information | Similar Motifs Found
motif file (matrix)
6 C G T A A C T G A T C G A C T G A C G T A C T G A C G T A C G T A C G T G A T C A G T C A G T C G A C T 1e-14-3.283e+011.02%0.01%22.0bp (21.6bp)NFkB-p65(RHD)/GM12787-p65-ChIP-Seq(GSE19485)/Homer(0.697)
More Information | Similar Motifs Found
motif file (matrix)
7 A T C G A G C T G T C A C G T A G T C A A G T C C G T A C T G A G T C A A G C T 1e-13-3.179e+013.53%0.61%27.9bp (35.4bp)FOXP2/MA0593.1/Jaspar(0.917)
More Information | Similar Motifs Found
motif file (matrix)
8 G T A C C G T A T G C A C G T A A C G T A C G T A G T C A G T C C G T A C G T A A T C G C G T A A C T G 1e-13-3.069e+010.91%0.01%18.8bp (32.1bp)TEAD4/MA0809.1/Jaspar(0.763)
More Information | Similar Motifs Found
motif file (matrix)
9 C T A G A G T C A C T G A G T C A T G C A T C G C G T A A C T G A G T C A G T C C G T A C G T A A C G T 1e-12-2.820e+010.68%0.01%26.6bp (14.7bp)NFY(CCAAT)/Promoter/Homer(0.660)
More Information | Similar Motifs Found
motif file (matrix)
10 C G T A A T C G A C G T C G A T C T G A A G T C C G T A A G T C C G T A C T G A 1e-12-2.818e+011.48%0.08%27.1bp (33.1bp)HLF(bZIP)/HSC-HLF.Flag-ChIP-Seq(GSE69817)/Homer(0.779)
More Information | Similar Motifs Found
motif file (matrix)
11 T G A C C T A G C T G A A T C G T A C G T G A C G A T C C G A T A C T G T G C A 1e-12-2.816e+019.44%3.94%27.2bp (29.6bp)ZFX(Zf)/mES-Zfx-ChIP-Seq(GSE11431)/Homer(0.792)
More Information | Similar Motifs Found
motif file (matrix)
12 G T C A G T C A A G C T C T G A A C G T A C G T C G A T T C G A G T A C G A C T 1e-12-2.763e+011.82%0.15%24.5bp (27.9bp)FOXM1(Forkhead)/MCF7-FOXM1-ChIP-Seq(GSE72977)/Homer(0.802)
More Information | Similar Motifs Found
motif file (matrix)
13 * C T A G T G C A G C A T A C G T C T A G C T G A A T G C A C G T A T G C G T C A 1e-11-2.670e+012.84%0.47%24.2bp (33.5bp)Jun-AP1(bZIP)/K562-cJun-ChIP-Seq(GSE31477)/Homer(0.848)
More Information | Similar Motifs Found
motif file (matrix)
14 * A C T G G C A T A G T C C T G A A C T G A C T G T G C A G T C A C T A G C G T A A C T G A C T G A G C T 1e-11-2.579e+011.14%0.04%20.4bp (20.1bp)ETS:RUNX(ETS,Runt)/Jurkat-RUNX1-ChIP-Seq(GSE17954)/Homer(0.677)
More Information | Similar Motifs Found
motif file (matrix)
15 * A C G T A C G T A G T C A G T C C G A T A C G T G A C T A G T C T C A G A G C T A C G T A C G T A C G T 1e-10-2.521e+011.25%0.06%29.1bp (26.6bp)Etv2(ETS)/ES-ER71-ChIP-Seq(GSE59402)/Homer(0.967)(0.692)
More Information | Similar Motifs Found
motif file (matrix)
16 * A T G C A G C T A C T G G T A C A T C G A G C T A G T C C G T A A T C G T A G C C T G A A T C G T G A C 1e-10-2.360e+012.28%0.34%24.3bp (28.9bp)MafA(bZIP)/Islet-MafA-ChIP-Seq(GSE30298)/Homer(0.793)
More Information | Similar Motifs Found
motif file (matrix)
17 * G C A T A C T G A C G T A C T G A G T C A C G T A T C G G T A C C T A G A C G T A C T G A G C T A G C T 1e-9-2.281e+010.57%0.00%19.3bp (0.0bp)MAFK/MA0496.1/Jaspar(0.604)
More Information | Similar Motifs Found
motif file (matrix)
18 * A G C T A C G T A G T C A G T C G A C T A G T C A G T C G A C T A T G C A C G T A T C G A T G C C T A G 1e-8-2.049e+010.91%0.03%30.5bp (25.9bp)PB0114.1_Egr1_2/Jaspar(0.614)
More Information | Similar Motifs Found
motif file (matrix)
19 * A G T C C T G A C G A T C G A T G T A C G T A C C T G A A C G T A C T G A G T C 1e-8-1.995e+010.68%0.02%21.6bp (28.0bp)TEAD(TEA)/Fibroblast-PU.1-ChIP-Seq(Unpublished)/Homer(0.752)
More Information | Similar Motifs Found
motif file (matrix)
20 * G A C T A C T G G T A C A T G C A G T C C G A T C T A G A T G C A G T C C G A T A C T G T A C G A C T G 1e-8-1.995e+010.68%0.02%29.1bp (14.9bp)SD0002.1_at_AC_acceptor/Jaspar(0.621)
More Information | Similar Motifs Found
motif file (matrix)
21 * A G T C C G T A A G T C C G A T A C T G A T G C A C T G A G T C A C T G A T G C A G T C A C T G A C T G 1e-8-1.995e+010.68%0.01%27.5bp (18.9bp)PB0199.1_Zfp161_2/Jaspar(0.749)
More Information | Similar Motifs Found
motif file (matrix)
22 * A G T C C G T A A C T G A C T G A C T G A G T C A G T C A T C G C G T A A T C G A C G T A G T C A G T C 1e-8-1.936e+010.57%0.01%29.8bp (24.4bp)Hnf4a/MA0114.3/Jaspar(0.550)
More Information | Similar Motifs Found
motif file (matrix)
23 * C T G A A C T G G T C A C G A T A C T G A C T G A G T C C T A G A G T C G T C A A C T G G A T C A C T G 1e-8-1.864e+010.68%0.02%18.0bp (15.5bp)AR-halfsite(NR)/LNCaP-AR-ChIP-Seq(GSE27824)/Homer(0.588)
More Information | Similar Motifs Found
motif file (matrix)
24 * A C G T A C T G A C T G C G T A C G T A G T C A C G A T C G T A A G T C C G T A 1e-7-1.785e+010.80%0.03%28.3bp (31.2bp)NFATC1/MA0624.1/Jaspar(0.651)
More Information | Similar Motifs Found
motif file (matrix)
25 * T G C A A T G C G A T C T A G C G T A C C T A G G A T C C T A G G A T C C A G T A T G C A T G C A T G C 1e-7-1.759e+010.46%0.01%14.0bp (18.2bp)PB0095.1_Zfp161_1/Jaspar(0.682)
More Information | Similar Motifs Found
motif file (matrix)
26 * G T A C A G T C A G T C C G T A A C T G A T G C C G T A C G T A A G T C A T G C 1e-6-1.444e+012.16%0.54%27.7bp (30.7bp)Rfx5(HTH)/GM12878-Rfx5-ChIP-Seq(GSE31477)/Homer(0.775)
More Information | Similar Motifs Found
motif file (matrix)
27 * A G T C A C G T A C T G A G T C C G T A A C T G C G T A A C T G A C G T A G T C A C G T A C T G A G T C C G T A A C T G C G T A 1e-3-7.906e+000.23%0.00%6.6bp (0.0bp)MafB(bZIP)/BMM-Mafb-ChIP-Seq(GSE75722)/Homer(0.684)
More Information | Similar Motifs Found
motif file (matrix)