Rank | Motif | Name | P-value | log P-pvalue | q-value (Benjamini) | # Target Sequences with Motif | % of Targets Sequences with Motif | # Background Sequences with Motif | % of Background Sequences with Motif | Motif File |
SVG |
1 |
| n-Myc(bHLH)/mES-nMyc-ChIP-Seq(GSE11431)/Homer | 1e-101 | -2.337e+02 | 0.0000 | 245.0 | 27.87% | 1730.8 | 5.40% | motif file (matrix) |
svg |
2 |
| CLOCK(bHLH)/Liver-Clock-ChIP-Seq(GSE39860)/Homer | 1e-96 | -2.232e+02 | 0.0000 | 216.0 | 24.57% | 1370.5 | 4.27% | motif file (matrix) |
svg |
3 |
| BMAL1(bHLH)/Liver-Bmal1-ChIP-Seq(GSE39860)/Homer | 1e-95 | -2.188e+02 | 0.0000 | 329.0 | 37.43% | 3442.2 | 10.74% | motif file (matrix) |
svg |
4 |
| USF1(bHLH)/GM12878-Usf1-ChIP-Seq(GSE32465)/Homer | 1e-91 | -2.104e+02 | 0.0000 | 192.0 | 21.84% | 1120.1 | 3.49% | motif file (matrix) |
svg |
5 |
| Max(bHLH)/K562-Max-ChIP-Seq(GSE31477)/Homer | 1e-88 | -2.035e+02 | 0.0000 | 210.0 | 23.89% | 1431.8 | 4.47% | motif file (matrix) |
svg |
6 |
| NPAS(bHLH)/Liver-NPAS-ChIP-Seq(GSE39860)/Homer | 1e-84 | -1.954e+02 | 0.0000 | 301.0 | 34.24% | 3166.6 | 9.88% | motif file (matrix) |
svg |
7 |
| c-Myc(bHLH)/LNCAP-cMyc-ChIP-Seq(Unpublished)/Homer | 1e-83 | -1.929e+02 | 0.0000 | 217.0 | 24.69% | 1631.9 | 5.09% | motif file (matrix) |
svg |
8 |
| NPAS2(bHLH)/Liver-NPAS2-ChIP-Seq(GSE39860)/Homer | 1e-73 | -1.699e+02 | 0.0000 | 235.0 | 26.73% | 2182.1 | 6.81% | motif file (matrix) |
svg |
9 |
| Usf2(bHLH)/C2C12-Usf2-ChIP-Seq(GSE36030)/Homer | 1e-69 | -1.610e+02 | 0.0000 | 128.0 | 14.56% | 604.5 | 1.89% | motif file (matrix) |
svg |
10 |
| c-Myc(bHLH)/mES-cMyc-ChIP-Seq(GSE11431)/Homer | 1e-68 | -1.570e+02 | 0.0000 | 169.0 | 19.23% | 1185.1 | 3.70% | motif file (matrix) |
svg |
11 |
| bHLHE40(bHLH)/HepG2-BHLHE40-ChIP-Seq(GSE31477)/Homer | 1e-54 | -1.244e+02 | 0.0000 | 131.0 | 14.90% | 884.9 | 2.76% | motif file (matrix) |
svg |
12 |
| MITF(bHLH)/MastCells-MITF-ChIP-Seq(GSE48085)/Homer | 1e-35 | -8.176e+01 | 0.0000 | 139.0 | 15.81% | 1480.1 | 4.62% | motif file (matrix) |
svg |
13 |
| CTCF(Zf)/CD4+-CTCF-ChIP-Seq(Barski_et_al.)/Homer | 1e-27 | -6.330e+01 | 0.0000 | 48.0 | 5.46% | 210.4 | 0.66% | motif file (matrix) |
svg |
14 |
| BORIS(Zf)/K562-CTCFL-ChIP-Seq(GSE32465)/Homer | 1e-21 | -4.849e+01 | 0.0000 | 60.0 | 6.83% | 477.2 | 1.49% | motif file (matrix) |
svg |
15 |
| E-box(bHLH)/Promoter/Homer | 1e-19 | -4.421e+01 | 0.0000 | 43.0 | 4.89% | 264.9 | 0.83% | motif file (matrix) |
svg |
16 |
| TFE3(bHLH)/MEF-TFE3-ChIP-Seq(GSE75757)/Homer | 1e-18 | -4.359e+01 | 0.0000 | 36.0 | 4.10% | 180.5 | 0.56% | motif file (matrix) |
svg |
17 |
| Foxa2(Forkhead)/Liver-Foxa2-ChIP-Seq(GSE25694)/Homer | 1e-16 | -3.763e+01 | 0.0000 | 60.0 | 6.83% | 603.7 | 1.88% | motif file (matrix) |
svg |
18 |
| HIF-1b(HLH)/T47D-HIF1b-ChIP-Seq(GSE59937)/Homer | 1e-15 | -3.565e+01 | 0.0000 | 171.0 | 19.45% | 3289.3 | 10.26% | motif file (matrix) |
svg |
19 |
| FOXA1(Forkhead)/LNCAP-FOXA1-ChIP-Seq(GSE27824)/Homer | 1e-15 | -3.535e+01 | 0.0000 | 65.0 | 7.39% | 731.6 | 2.28% | motif file (matrix) |
svg |
20 |
| Atf3(bZIP)/GBM-ATF3-ChIP-Seq(GSE33912)/Homer | 1e-14 | -3.296e+01 | 0.0000 | 52.0 | 5.92% | 521.0 | 1.62% | motif file (matrix) |
svg |
21 |
| JunB(bZIP)/DendriticCells-Junb-ChIP-Seq(GSE36099)/Homer | 1e-12 | -2.975e+01 | 0.0000 | 46.0 | 5.23% | 454.2 | 1.42% | motif file (matrix) |
svg |
22 |
| Fra2(bZIP)/Striatum-Fra2-ChIP-Seq(GSE43429)/Homer | 1e-12 | -2.974e+01 | 0.0000 | 43.0 | 4.89% | 401.2 | 1.25% | motif file (matrix) |
svg |
23 |
| BATF(bZIP)/Th17-BATF-ChIP-Seq(GSE39756)/Homer | 1e-12 | -2.926e+01 | 0.0000 | 49.0 | 5.57% | 516.5 | 1.61% | motif file (matrix) |
svg |
24 |
| FOXA1(Forkhead)/MCF7-FOXA1-ChIP-Seq(GSE26831)/Homer | 1e-12 | -2.912e+01 | 0.0000 | 49.0 | 5.57% | 518.6 | 1.62% | motif file (matrix) |
svg |
25 |
| Fra1(bZIP)/BT549-Fra1-ChIP-Seq(GSE46166)/Homer | 1e-12 | -2.802e+01 | 0.0000 | 44.0 | 5.01% | 441.5 | 1.38% | motif file (matrix) |
svg |
26 |
| AP-1(bZIP)/ThioMac-PU.1-ChIP-Seq(GSE21512)/Homer | 1e-12 | -2.788e+01 | 0.0000 | 56.0 | 6.37% | 675.7 | 2.11% | motif file (matrix) |
svg |
27 |
| Fox:Ebox(Forkhead,bHLH)/Panc1-Foxa2-ChIP-Seq(GSE47459)/Homer | 1e-11 | -2.762e+01 | 0.0000 | 70.0 | 7.96% | 979.6 | 3.05% | motif file (matrix) |
svg |
28 |
| Ptf1a(bHLH)/Panc1-Ptf1a-ChIP-Seq(GSE47459)/Homer | 1e-11 | -2.722e+01 | 0.0000 | 256.0 | 29.12% | 6183.8 | 19.29% | motif file (matrix) |
svg |
29 |
| Fosl2(bZIP)/3T3L1-Fosl2-ChIP-Seq(GSE56872)/Homer | 1e-10 | -2.519e+01 | 0.0000 | 34.0 | 3.87% | 301.8 | 0.94% | motif file (matrix) |
svg |
30 |
| Jun-AP1(bZIP)/K562-cJun-ChIP-Seq(GSE31477)/Homer | 1e-10 | -2.502e+01 | 0.0000 | 28.0 | 3.19% | 207.9 | 0.65% | motif file (matrix) |
svg |
31 |
| TEAD(TEA)/Fibroblast-PU.1-ChIP-Seq(Unpublished)/Homer | 1e-10 | -2.386e+01 | 0.0000 | 45.0 | 5.12% | 522.6 | 1.63% | motif file (matrix) |
svg |
32 |
| HEB(bHLH)/mES-Heb-ChIP-Seq(GSE53233)/Homer | 1e-9 | -2.269e+01 | 0.0000 | 202.0 | 22.98% | 4770.2 | 14.88% | motif file (matrix) |
svg |
33 |
| FoxL2(Forkhead)/Ovary-FoxL2-ChIP-Seq(GSE60858)/Homer | 1e-9 | -2.101e+01 | 0.0000 | 40.0 | 4.55% | 470.4 | 1.47% | motif file (matrix) |
svg |
34 |
| Foxa3(Forkhead)/Liver-Foxa3-ChIP-Seq(GSE77670)/Homer | 1e-9 | -2.097e+01 | 0.0000 | 24.0 | 2.73% | 184.8 | 0.58% | motif file (matrix) |
svg |
35 |
| FOXM1(Forkhead)/MCF7-FOXM1-ChIP-Seq(GSE72977)/Homer | 1e-9 | -2.092e+01 | 0.0000 | 45.0 | 5.12% | 574.5 | 1.79% | motif file (matrix) |
svg |
36 |
| Esrrb(NR)/mES-Esrrb-ChIP-Seq(GSE11431)/Homer | 1e-8 | -2.024e+01 | 0.0000 | 52.0 | 5.92% | 740.1 | 2.31% | motif file (matrix) |
svg |
37 |
| HNF4a(NR),DR1/HepG2-HNF4a-ChIP-Seq(GSE25021)/Homer | 1e-8 | -2.011e+01 | 0.0000 | 41.0 | 4.66% | 506.0 | 1.58% | motif file (matrix) |
svg |
38 |
| FOXK1(Forkhead)/HEK293-FOXK1-ChIP-Seq(GSE51673)/Homer | 1e-8 | -1.886e+01 | 0.0000 | 52.0 | 5.92% | 772.3 | 2.41% | motif file (matrix) |
svg |
39 |
| Erra(NR)/HepG2-Erra-ChIP-Seq(GSE31477)/Homer | 1e-7 | -1.837e+01 | 0.0000 | 153.0 | 17.41% | 3532.1 | 11.02% | motif file (matrix) |
svg |
40 |
| TEAD2(TEA)/Py2T-Tead2-ChIP-Seq(GSE55709)/Homer | 1e-7 | -1.831e+01 | 0.0000 | 38.0 | 4.32% | 477.1 | 1.49% | motif file (matrix) |
svg |
41 |
| COUP-TFII(NR)/Artia-Nr2f2-ChIP-Seq(GSE46497)/Homer | 1e-7 | -1.819e+01 | 0.0000 | 116.0 | 13.20% | 2465.0 | 7.69% | motif file (matrix) |
svg |
42 |
| THRb(NR)/Liver-NR1A2-ChIP-Seq(GSE52613)/Homer | 1e-7 | -1.774e+01 | 0.0000 | 242.0 | 27.53% | 6345.0 | 19.79% | motif file (matrix) |
svg |
43 |
| CEBP(bZIP)/ThioMac-CEBPb-ChIP-Seq(GSE21512)/Homer | 1e-7 | -1.758e+01 | 0.0000 | 36.0 | 4.10% | 449.6 | 1.40% | motif file (matrix) |
svg |
44 |
| Bach2(bZIP)/OCILy7-Bach2-ChIP-Seq(GSE44420)/Homer | 1e-7 | -1.744e+01 | 0.0000 | 21.0 | 2.39% | 172.0 | 0.54% | motif file (matrix) |
svg |
45 |
| TEAD4(TEA)/Tropoblast-Tead4-ChIP-Seq(GSE37350)/Homer | 1e-7 | -1.742e+01 | 0.0000 | 57.0 | 6.48% | 927.8 | 2.89% | motif file (matrix) |
svg |
46 |
| FOXK2(Forkhead)/U2OS-FOXK2-ChIP-Seq(E-MTAB-2204)/Homer | 1e-7 | -1.636e+01 | 0.0000 | 40.0 | 4.55% | 559.8 | 1.75% | motif file (matrix) |
svg |
47 |
| FOXP1(Forkhead)/H9-FOXP1-ChIP-Seq(GSE31006)/Homer | 1e-6 | -1.543e+01 | 0.0000 | 27.0 | 3.07% | 305.2 | 0.95% | motif file (matrix) |
svg |
48 |
| Nur77(NR)/K562-NR4A1-ChIP-Seq(GSE31363)/Homer | 1e-6 | -1.483e+01 | 0.0000 | 17.0 | 1.93% | 135.5 | 0.42% | motif file (matrix) |
svg |
49 |
| HLF(bZIP)/HSC-HLF.Flag-ChIP-Seq(GSE69817)/Homer | 1e-6 | -1.390e+01 | 0.0000 | 34.0 | 3.87% | 480.4 | 1.50% | motif file (matrix) |
svg |
50 |
| NF-E2(bZIP)/K562-NFE2-ChIP-Seq(GSE31477)/Homer | 1e-5 | -1.323e+01 | 0.0000 | 10.0 | 1.14% | 50.4 | 0.16% | motif file (matrix) |
svg |
51 |
| Foxo3(Forkhead)/U2OS-Foxo3-ChIP-Seq(E-MTAB-2701)/Homer | 1e-5 | -1.235e+01 | 0.0000 | 36.0 | 4.10% | 563.9 | 1.76% | motif file (matrix) |
svg |
52 |
| Foxo1(Forkhead)/RAW-Foxo1-ChIP-Seq(Fan_et_al.)/Homer | 1e-5 | -1.174e+01 | 0.0001 | 100.0 | 11.38% | 2332.7 | 7.28% | motif file (matrix) |
svg |
53 |
| Nr5a2(NR)/Pancreas-LRH1-ChIP-Seq(GSE34295)/Homer | 1e-4 | -1.053e+01 | 0.0002 | 47.0 | 5.35% | 895.6 | 2.79% | motif file (matrix) |
svg |
54 |
| Foxf1(Forkhead)/Lung-Foxf1-ChIP-Seq(GSE77951)/Homer | 1e-4 | -1.031e+01 | 0.0002 | 32.0 | 3.64% | 523.8 | 1.63% | motif file (matrix) |
svg |
55 |
| ETS(ETS)/Promoter/Homer | 1e-4 | -1.021e+01 | 0.0002 | 40.0 | 4.55% | 725.3 | 2.26% | motif file (matrix) |
svg |
56 |
| MafK(bZIP)/C2C12-MafK-ChIP-Seq(GSE36030)/Homer | 1e-4 | -9.400e+00 | 0.0005 | 18.0 | 2.05% | 227.2 | 0.71% | motif file (matrix) |
svg |
57 |
| HNF6(Homeobox)/Liver-Hnf6-ChIP-Seq(ERP000394)/Homer | 1e-4 | -9.265e+00 | 0.0006 | 21.0 | 2.39% | 294.5 | 0.92% | motif file (matrix) |
svg |
58 |
| Twist(bHLH)/HMLE-TWIST1-ChIP-Seq(Chang_et_al)/Homer | 1e-3 | -8.949e+00 | 0.0008 | 16.0 | 1.82% | 194.1 | 0.61% | motif file (matrix) |
svg |
59 |
| ZNF711(Zf)/SHSY5Y-ZNF711-ChIP-Seq(GSE20673)/Homer | 1e-3 | -8.398e+00 | 0.0014 | 171.0 | 19.45% | 4818.6 | 15.03% | motif file (matrix) |
svg |
60 |
| Nrf2(bZIP)/Lymphoblast-Nrf2-ChIP-Seq(GSE37589)/Homer | 1e-3 | -8.291e+00 | 0.0015 | 6.0 | 0.68% | 31.5 | 0.10% | motif file (matrix) |
svg |
61 |
| Fli1(ETS)/CD8-FLI-ChIP-Seq(GSE20898)/Homer | 1e-3 | -7.966e+00 | 0.0021 | 89.0 | 10.13% | 2242.0 | 6.99% | motif file (matrix) |
svg |
62 |
| Tcf3(HMG)/mES-Tcf3-ChIP-Seq(GSE11724)/Homer | 1e-3 | -7.819e+00 | 0.0024 | 14.0 | 1.59% | 173.6 | 0.54% | motif file (matrix) |
svg |
63 |
| Elk4(ETS)/Hela-Elk4-ChIP-Seq(GSE31477)/Homer | 1e-3 | -7.777e+00 | 0.0024 | 62.0 | 7.05% | 1442.6 | 4.50% | motif file (matrix) |
svg |
64 |
| Elk1(ETS)/Hela-Elk1-ChIP-Seq(GSE31477)/Homer | 1e-3 | -7.702e+00 | 0.0026 | 61.0 | 6.94% | 1417.4 | 4.42% | motif file (matrix) |
svg |
65 |
| Bach1(bZIP)/K562-Bach1-ChIP-Seq(GSE31477)/Homer | 1e-3 | -7.654e+00 | 0.0027 | 6.0 | 0.68% | 35.0 | 0.11% | motif file (matrix) |
svg |
66 |
| HIF-1a(bHLH)/MCF7-HIF1a-ChIP-Seq(GSE28352)/Homer | 1e-3 | -6.919e+00 | 0.0055 | 38.0 | 4.32% | 800.1 | 2.50% | motif file (matrix) |
svg |
67 |
| Tcf4(HMG)/Hct116-Tcf4-ChIP-Seq(SRA012054)/Homer | 1e-2 | -6.895e+00 | 0.0055 | 19.0 | 2.16% | 305.5 | 0.95% | motif file (matrix) |
svg |
68 |
| Nr5a2(NR)/mES-Nr5a2-ChIP-Seq(GSE19019)/Homer | 1e-2 | -6.850e+00 | 0.0057 | 32.0 | 3.64% | 639.3 | 1.99% | motif file (matrix) |
svg |
69 |
| Sox17(HMG)/Endoderm-Sox17-ChIP-Seq(GSE61475)/Homer | 1e-2 | -6.800e+00 | 0.0059 | 32.0 | 3.64% | 641.7 | 2.00% | motif file (matrix) |
svg |
70 |
| PPARE(NR),DR1/3T3L1-Pparg-ChIP-Seq(GSE13511)/Homer | 1e-2 | -6.782e+00 | 0.0059 | 54.0 | 6.14% | 1265.5 | 3.95% | motif file (matrix) |
svg |
71 |
| Meis1(Homeobox)/MastCells-Meis1-ChIP-Seq(GSE48085)/Homer | 1e-2 | -6.677e+00 | 0.0065 | 98.0 | 11.15% | 2622.8 | 8.18% | motif file (matrix) |
svg |
72 |
| SPDEF(ETS)/VCaP-SPDEF-ChIP-Seq(SRA014231)/Homer | 1e-2 | -6.355e+00 | 0.0088 | 59.0 | 6.71% | 1440.6 | 4.49% | motif file (matrix) |
svg |
73 |
| ETV1(ETS)/GIST48-ETV1-ChIP-Seq(GSE22441)/Homer | 1e-2 | -6.158e+00 | 0.0106 | 91.0 | 10.35% | 2445.8 | 7.63% | motif file (matrix) |
svg |
74 |
| Tgif2(Homeobox)/mES-Tgif2-ChIP-Seq(GSE55404)/Homer | 1e-2 | -5.997e+00 | 0.0122 | 162.0 | 18.43% | 4781.5 | 14.91% | motif file (matrix) |
svg |
75 |
| GABPA(ETS)/Jurkat-GABPa-ChIP-Seq(GSE17954)/Homer | 1e-2 | -5.993e+00 | 0.0122 | 65.0 | 7.39% | 1647.5 | 5.14% | motif file (matrix) |
svg |
76 |
| RXR(NR),DR1/3T3L1-RXR-ChIP-Seq(GSE13511)/Homer | 1e-2 | -5.952e+00 | 0.0125 | 65.0 | 7.39% | 1650.5 | 5.15% | motif file (matrix) |
svg |
77 |
| MafA(bZIP)/Islet-MafA-ChIP-Seq(GSE30298)/Homer | 1e-2 | -5.870e+00 | 0.0133 | 45.0 | 5.12% | 1054.3 | 3.29% | motif file (matrix) |
svg |
78 |
| ELF1(ETS)/Jurkat-ELF1-ChIP-Seq(SRA014231)/Homer | 1e-2 | -5.817e+00 | 0.0139 | 51.0 | 5.80% | 1235.6 | 3.85% | motif file (matrix) |
svg |
79 |
| CEBP:AP1(bZIP)/ThioMac-CEBPb-ChIP-Seq(GSE21512)/Homer | 1e-2 | -5.813e+00 | 0.0139 | 32.0 | 3.64% | 684.1 | 2.13% | motif file (matrix) |
svg |
80 |
| GFY-Staf(?,Zf)/Promoter/Homer | 1e-2 | -5.736e+00 | 0.0147 | 12.0 | 1.37% | 171.8 | 0.54% | motif file (matrix) |
svg |
81 |
| ZFX(Zf)/mES-Zfx-ChIP-Seq(GSE11431)/Homer | 1e-2 | -5.720e+00 | 0.0147 | 102.0 | 11.60% | 2837.9 | 8.85% | motif file (matrix) |
svg |
82 |
| TR4(NR),DR1/Hela-TR4-ChIP-Seq(GSE24685)/Homer | 1e-2 | -5.553e+00 | 0.0172 | 10.0 | 1.14% | 131.6 | 0.41% | motif file (matrix) |
svg |
83 |
| Chop(bZIP)/MEF-Chop-ChIP-Seq(GSE35681)/Homer | 1e-2 | -5.424e+00 | 0.0193 | 12.0 | 1.37% | 178.8 | 0.56% | motif file (matrix) |
svg |
84 |
| EHF(ETS)/LoVo-EHF-ChIP-Seq(GSE49402)/Homer | 1e-2 | -5.323e+00 | 0.0211 | 67.0 | 7.62% | 1760.7 | 5.49% | motif file (matrix) |
svg |
85 |
| THRa(NR)/C17.2-THRa-ChIP-Seq(GSE38347)/Homer | 1e-2 | -4.986e+00 | 0.0293 | 28.0 | 3.19% | 611.2 | 1.91% | motif file (matrix) |
svg |
86 |
| Etv2(ETS)/ES-ER71-ChIP-Seq(GSE59402)/Homer(0.967) | 1e-2 | -4.984e+00 | 0.0293 | 55.0 | 6.26% | 1414.2 | 4.41% | motif file (matrix) |
svg |
87 |
| NRF(NRF)/Promoter/Homer | 1e-2 | -4.838e+00 | 0.0332 | 38.0 | 4.32% | 909.5 | 2.84% | motif file (matrix) |
svg |