Information for 1-VCCACGTGGBYBG (Motif 1)

T C A G A T G C A G T C C G T A A G T C C T A G A C G T A C T G T C A G A G T C G A T C A T C G T C A G
Reverse Opposite:
A G T C T A G C C T A G T C A G A G T C A G T C C G T A A G T C C T A G A C G T A C T G T A C G A G T C
p-value:1e-108
log p-value:-2.501e+02
Information Content per bp:1.642
Number of Target Sequences with motif266.0
Percentage of Target Sequences with motif30.26%
Number of Background Sequences with motif1930.0
Percentage of Background Sequences with motif6.02%
Average Position of motif in Targets52.8 +/- 19.6bp
Average Position of motif in Background50.2 +/- 37.8bp
Strand Bias (log2 ratio + to - strand density)-0.0
Multiplicity (# of sites on avg that occur together)1.19
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

n-Myc(bHLH)/mES-nMyc-ChIP-Seq(GSE11431)/Homer

Match Rank:1
Score:0.98
Offset:1
Orientation:reverse strand
Alignment:VCCACGTGGBYBG
-CCACGTGGNN--
 T C A G A T G C A G T C C G T A A G T C C T A G A C G T A C T G T C A G A G T C G A T C A T C G T C A G
A C G T T A G C A G T C C G T A A G T C C T A G G C A T A C T G A T C G A G C T A T G C A C G T A C G T

c-Myc(bHLH)/mES-cMyc-ChIP-Seq(GSE11431)/Homer

Match Rank:2
Score:0.98
Offset:1
Orientation:reverse strand
Alignment:VCCACGTGGBYBG
-CCACGTGGNN--
 T C A G A T G C A G T C C G T A A G T C C T A G A C G T A C T G T C A G A G T C G A T C A T C G T C A G
A C G T T A G C A G T C C G T A A G T C C T A G A G C T A C T G A T C G A G T C A G T C A C G T A C G T

c-Myc(bHLH)/LNCAP-cMyc-ChIP-Seq(Unpublished)/Homer

Match Rank:3
Score:0.97
Offset:0
Orientation:forward strand
Alignment:VCCACGTGGBYBG
NCCACGTG-----
 T C A G A T G C A G T C C G T A A G T C C T A G A C G T A C T G T C A G A G T C G A T C A T C G T C A G
T C G A T A G C T G A C C T G A A G T C A C T G G A C T C A T G A C G T A C G T A C G T A C G T A C G T

Max(bHLH)/K562-Max-ChIP-Seq(GSE31477)/Homer

Match Rank:4
Score:0.97
Offset:0
Orientation:forward strand
Alignment:VCCACGTGGBYBG
ACCACGTGGTNN-
 T C A G A T G C A G T C C G T A A G T C C T A G A C G T A C T G T C A G A G T C G A T C A T C G T C A G
T C G A T G A C A G T C C G T A A G T C C T A G A C G T A C T G A C T G A G C T A G T C G C A T A C G T

MAX/MA0058.3/Jaspar

Match Rank:5
Score:0.96
Offset:0
Orientation:forward strand
Alignment:VCCACGTGGBYBG
ACCACGTGCT---
 T C A G A T G C A G T C C G T A A G T C C T A G A C G T A C T G T C A G A G T C G A T C A T C G T C A G
T G C A T G A C G T A C C T G A A G T C T C A G G A C T A C T G A T G C G A C T A C G T A C G T A C G T

BMAL1(bHLH)/Liver-Bmal1-ChIP-Seq(GSE39860)/Homer

Match Rank:6
Score:0.96
Offset:2
Orientation:reverse strand
Alignment:VCCACGTGGBYBG
--CACGTGNC---
 T C A G A T G C A G T C C G T A A G T C C T A G A C G T A C T G T C A G A G T C G A T C A T C G T C A G
A C G T A C G T G T A C C T G A A G T C C T A G G C A T A C T G G T C A G A T C A C G T A C G T A C G T

Mycn/MA0104.3/Jaspar

Match Rank:7
Score:0.96
Offset:0
Orientation:forward strand
Alignment:VCCACGTGGBYBG
GCCACGTG-----
 T C A G A T G C A G T C C G T A A G T C C T A G A C G T A C T G T C A G A G T C G A T C A T C G T C A G
C T A G A T G C A G T C C G T A A G T C C T A G A C G T A C T G A C G T A C G T A C G T A C G T A C G T

CLOCK(bHLH)/Liver-Clock-ChIP-Seq(GSE39860)/Homer

Match Rank:8
Score:0.96
Offset:2
Orientation:reverse strand
Alignment:VCCACGTGGBYBG
--CACGTGDC---
 T C A G A T G C A G T C C G T A A G T C C T A G A C G T A C T G T C A G A G T C G A T C A T C G T C A G
A C G T A C G T G A T C C T G A A G T C C T A G G C A T C T A G C G T A G A T C A C G T A C G T A C G T

NPAS(bHLH)/Liver-NPAS-ChIP-Seq(GSE39860)/Homer

Match Rank:9
Score:0.96
Offset:0
Orientation:forward strand
Alignment:VCCACGTGGBYBG
NVCACGTG-----
 T C A G A T G C A G T C C G T A A G T C C T A G A C G T A C T G T C A G A G T C G A T C A T C G T C A G
C G A T T G C A G T A C C G T A A G T C C T A G G A C T C A T G A C G T A C G T A C G T A C G T A C G T

MNT/MA0825.1/Jaspar

Match Rank:10
Score:0.96
Offset:0
Orientation:forward strand
Alignment:VCCACGTGGBYBG
ACCACGTGCC---
 T C A G A T G C A G T C C G T A A G T C C T A G A C G T A C T G T C A G A G T C G A T C A T C G T C A G
C T G A T A G C G T A C C G T A A G T C C T A G A C G T A C T G T G A C G A T C A C G T A C G T A C G T