Information for 3-CGAGGVCTTVTGGGAG (Motif 5)

A G T C A T C G C G T A C A T G A C T G T C G A A G T C A C G T A C G T T A C G A G C T A C T G A C T G A C T G C G T A C T A G
Reverse Opposite:
A G T C A C G T A G T C A G T C A G T C C T G A A T G C C G T A G T C A A C T G A G C T A G T C G T A C A C G T A T G C C T A G
p-value:1e-14
log p-value:-3.375e+01
Information Content per bp:1.816
Number of Target Sequences with motif7.0
Percentage of Target Sequences with motif0.80%
Number of Background Sequences with motif1.3
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets53.0 +/- 28.8bp
Average Position of motif in Background54.5 +/- 8.1bp
Strand Bias (log2 ratio + to - strand density)-0.7
Multiplicity (# of sites on avg that occur together)1.14
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

ZNF143|STAF(Zf)/CUTLL-ZNF143-ChIP-Seq(GSE29600)/Homer

Match Rank:1
Score:0.72
Offset:3
Orientation:reverse strand
Alignment:CGAGGVCTTVTGGGAG--
---RGSMTBCTGGGAAAT
 A G T C A T C G C G T A C A T G A C T G T C G A A G T C A C G T A C G T T A C G A G C T A C T G A C T G A C T G C G T A C T A G A C G T A C G T
A C G T A C G T A C G T C T A G A C T G T A G C G T C A A G C T A G C T T G A C G A C T A C T G A C T G A C T G C G T A T C G A C G T A A C G T

ZNF143/MA0088.2/Jaspar

Match Rank:2
Score:0.61
Offset:0
Orientation:reverse strand
Alignment:CGAGGVCTTVTGGGAG
CAATGCATTGTGGGTA
 A G T C A T C G C G T A C A T G A C T G T C G A A G T C A C G T A C G T T A C G A G C T A C T G A C T G A C T G C G T A C T A G
G A T C C T G A C T G A C A G T A C T G A G T C G C T A G A C T A G C T T C A G G A C T A C T G A C T G A C T G G C A T T C G A

STAT3/MA0144.2/Jaspar

Match Rank:3
Score:0.55
Offset:6
Orientation:forward strand
Alignment:CGAGGVCTTVTGGGAG-
------CTTCTGGGAAA
 A G T C A T C G C G T A C A T G A C T G T C G A A G T C A C G T A C G T T A C G A G C T A C T G A C T G A C T G C G T A C T A G A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A G T C C G A T A C G T G A T C G A C T C A T G C T A G C T A G C G T A C G T A C T G A

Ronin(THAP)/ES-Thap11-ChIP-Seq(GSE51522)/Homer

Match Rank:4
Score:0.54
Offset:4
Orientation:reverse strand
Alignment:CGAGGVCTTVTGGGAG--------
----GCMTBCTGGGAGTTGTAGTY
 A G T C A T C G C G T A C A T G A C T G T C G A A G T C A C G T A C G T T A C G A G C T A C T G A C T G A C T G C G T A C T A G A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T C A T G T A G C G T A C A G C T A C G T T G A C A G C T C T A G A C T G C T A G C G T A T C A G G C A T A G C T A C T G C G A T C T G A A C T G A C G T A G T C

Znf263(Zf)/K562-Znf263-ChIP-Seq(GSE31477)/Homer

Match Rank:5
Score:0.54
Offset:11
Orientation:reverse strand
Alignment:CGAGGVCTTVTGGGAG-----
-----------GGGAGGACNG
 A G T C A T C G C G T A C A T G A C T G T C G A A G T C A C G T A C G T T A C G A G C T A C T G A C T G A C T G C G T A C T A G A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T C T A G A C T G A C T G C G T A A C T G A T C G C G T A A T G C A G C T T A C G

GFY-Staf(?,Zf)/Promoter/Homer

Match Rank:6
Score:0.53
Offset:4
Orientation:reverse strand
Alignment:CGAGGVCTTVTGGGAG--------
----GCATTCTGGGAATTGTAGTT
 A G T C A T C G C G T A C A T G A C T G T C G A A G T C A C G T A C G T T A C G A G C T A C T G A C T G A C T G C G T A C T A G A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T T C A G T A G C G T C A A G C T A C G T A G T C A G C T A C T G A C T G C T A G C G T A C T G A C G A T A G C T A C T G A C G T C T G A A C T G A C G T A G C T

POL013.1_MED-1/Jaspar

Match Rank:7
Score:0.53
Offset:11
Orientation:reverse strand
Alignment:CGAGGVCTTVTGGGAG-
-----------CGGAGC
 A G T C A T C G C G T A C A T G A C T G T C G A A G T C A C G T A C G T T A C G A G C T A C T G A C T G A C T G C G T A C T A G A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A T G C A C T G A C T G C G T A A C T G A G T C

Stat3(Stat)/mES-Stat3-ChIP-Seq(GSE11431)/Homer

Match Rank:8
Score:0.52
Offset:6
Orientation:forward strand
Alignment:CGAGGVCTTVTGGGAG
------CTTCCNGGAA
 A G T C A T C G C G T A C A T G A C T G T C G A A G T C A C G T A C G T T A C G A G C T A C T G A C T G A C T G C G T A C T A G
A C G T A C G T A C G T A C G T A C G T A C G T A G T C G A C T C A G T G T A C A G T C A T C G T C A G A C T G G T C A C G T A

STAT1/MA0137.3/Jaspar

Match Rank:9
Score:0.52
Offset:6
Orientation:forward strand
Alignment:CGAGGVCTTVTGGGAG-
------TTTCCAGGAAA
 A G T C A T C G C G T A C A T G A C T G T C G A A G T C A C G T A C G T T A C G A G C T A C T G A C T G A C T G C G T A C T A G A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A G C T A C G T T G A C G A T C C T G A C T A G C A T G C T G A G T C A C T G A

TFAP2A(var.2)/MA0810.1/Jaspar

Match Rank:10
Score:0.52
Offset:3
Orientation:reverse strand
Alignment:CGAGGVCTTVTGGGAG
---TGCCCNGGGGCA-
 A G T C A T C G C G T A C A T G A C T G T C G A A G T C A C G T A C G T T A C G A G C T A C T G A C T G A C T G C G T A C T A G
A C G T A C G T A C G T G A C T T A C G T A G C A G T C A G T C A C T G T C A G T C A G T C A G A T C G A T G C C T G A A C G T