Information for 18-CCCAGCAACS (Motif 26)

G T A C A G T C A G T C C G T A A C T G A T G C C G T A C G T A A G T C A T G C
Reverse Opposite:
T A C G A C T G A C G T G C A T A T C G A G T C G C A T C T A G C T A G A C T G
p-value:1e-6
log p-value:-1.444e+01
Information Content per bp:1.809
Number of Target Sequences with motif19.0
Percentage of Target Sequences with motif2.16%
Number of Background Sequences with motif172.5
Percentage of Background Sequences with motif0.54%
Average Position of motif in Targets45.9 +/- 27.7bp
Average Position of motif in Background48.8 +/- 30.7bp
Strand Bias (log2 ratio + to - strand density)0.0
Multiplicity (# of sites on avg that occur together)1.06
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Rfx5(HTH)/GM12878-Rfx5-ChIP-Seq(GSE31477)/Homer

Match Rank:1
Score:0.77
Offset:-1
Orientation:forward strand
Alignment:-CCCAGCAACS-
SCCTAGCAACAG
 A C G T G T A C A G T C A G T C C G T A A C T G A T G C C G T A C G T A A G T C A T G C A C G T
A T G C A G T C G T A C A G C T T C G A C T A G G A T C C T G A G T C A A G T C G C T A T C A G

PB0056.1_Rfxdc2_1/Jaspar

Match Rank:2
Score:0.76
Offset:-3
Orientation:forward strand
Alignment:---CCCAGCAACS--
CCGCATAGCAACGGA
 A C G T A C G T A C G T G T A C A G T C A G T C C G T A A C T G A T G C C G T A C G T A A G T C A T G C A C G T A C G T
A G T C A G T C T A C G A T G C G C T A G A C T T C G A C T A G G A T C C T G A T C G A A G T C T A C G T C A G C T G A

Rfx6(HTH)/Min6b1-Rfx6.HA-ChIP-Seq(GSE62844)/Homer

Match Rank:3
Score:0.75
Offset:-5
Orientation:forward strand
Alignment:-----CCCAGCAACS
TGTTKCCTAGCAACM
 A C G T A C G T A C G T A C G T A C G T G T A C A G T C A G T C C G T A A C T G A T G C C G T A C G T A A G T C A T G C
C A G T T C A G A G C T G A C T A C G T A G T C G A T C G A C T C T G A A C T G G A T C C G T A C T G A A G T C G T A C

PB0055.1_Rfx4_1/Jaspar

Match Rank:4
Score:0.74
Offset:-3
Orientation:forward strand
Alignment:---CCCAGCAACS--
TACCATAGCAACGGT
 A C G T A C G T A C G T G T A C A G T C A G T C C G T A A C T G A T G C C G T A C G T A A G T C A T G C A C G T A C G T
A G C T G T C A T A G C A T G C G T C A A G C T T C G A C T A G G A T C C T G A C T G A A G T C T A C G T C A G C G A T

PB0054.1_Rfx3_1/Jaspar

Match Rank:5
Score:0.71
Offset:-7
Orientation:forward strand
Alignment:-------CCCAGCAACS------
TGTGACCCTTAGCAACCGATTAA
 A C G T A C G T A C G T A C G T A C G T A C G T A C G T G T A C A G T C A G T C C G T A A C T G A T G C C G T A C G T A A G T C A T G C A C G T A C G T A C G T A C G T A C G T A C G T
G A C T C A T G A G C T A T C G G T C A G A T C T G A C A T G C G A C T A G C T T C G A C T A G G A T C C T G A C G T A A G T C T A G C T C A G C G T A G C A T G C A T G C T A G C T A

ZNF416(Zf)/HEK293-ZNF416.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:6
Score:0.64
Offset:-2
Orientation:reverse strand
Alignment:--CCCAGCAACS
TGCCCAGNHW--
 A C G T A C G T G T A C A G T C A G T C C G T A A C T G A T G C C G T A C G T A A G T C A T G C
C G A T C A T G A G T C G A T C G T A C G C T A C T A G C A T G G A T C C G T A A C G T A C G T

Rfx1/MA0509.1/Jaspar

Match Rank:7
Score:0.63
Offset:-5
Orientation:forward strand
Alignment:-----CCCAGCAACS
GTTGCCATGGCAAC-
 A C G T A C G T A C G T A C G T A C G T G T A C A G T C A G T C C G T A A C T G A T G C C G T A C G T A A G T C A T G C
C T A G A C G T G A C T A C T G A G T C A G T C G C T A G C A T C T A G C T A G G T A C C T G A C T G A A G T C A C G T

ZNF143|STAF(Zf)/CUTLL-ZNF143-ChIP-Seq(GSE29600)/Homer

Match Rank:8
Score:0.60
Offset:-4
Orientation:forward strand
Alignment:----CCCAGCAACS-
ATTTCCCAGVAKSCY
 A C G T A C G T A C G T A C G T G T A C A G T C A G T C C G T A A C T G A T G C C G T A C G T A A G T C A T G C A C G T
T G C A G C A T A G C T G C A T A G T C A G T C A G T C C T G A A C T G T C G A T C G A C A G T A T C G A G T C G A T C

GLIS2/MA0736.1/Jaspar

Match Rank:9
Score:0.58
Offset:-4
Orientation:forward strand
Alignment:----CCCAGCAACS
GACCCCCCGCGAAG
 A C G T A C G T A C G T A C G T G T A C A G T C A G T C C G T A A C T G A T G C C G T A C G T A A G T C A T G C
A C T G T C G A A G T C G T A C G A T C G T A C G T A C G A T C C T A G A G T C C T A G C T G A G T C A A T C G

PB0164.1_Smad3_2/Jaspar

Match Rank:10
Score:0.57
Offset:-4
Orientation:forward strand
Alignment:----CCCAGCAACS---
TACGCCCCGCCACTCTG
 A C G T A C G T A C G T A C G T G T A C A G T C A G T C C G T A A C T G A T G C C G T A C G T A A G T C A T G C A C G T A C G T A C G T
C A G T G T C A G T A C A C T G G A T C A G T C T A G C A T G C T A C G A G T C G T A C G T C A G T A C G A C T A G T C G A C T A C T G