Homer de novo Motif Results (hs_CervixCarcinoma_HeLa_undef_POLIII_SRX017002_homermotifs_10_13_16/)

Known Motif Enrichment Results
Gene Ontology Enrichment Results
If Homer is having trouble matching a motif to a known motif, try copy/pasting the matrix file into STAMP
More information on motif finding results: HOMER | Description of Results | Tips
Total target sequences = 208
Total background sequences = 23444
* - possible false positive
RankMotifP-valuelog P-pvalue% of Targets% of Background STD(Bg STD) Best Match/DetailsMotif File
1 T C A G A T C G T A G C C T G A G T A C A T G C A G T C C A T G G T A C T A C G C T A G A C T G A C G T A T G C G A C T T A G C 1e-21-4.907e+014.33%0.01%24.9bp (17.9bp)Znf423/MA0116.1/Jaspar(0.592)
More Information | Similar Motifs Found
motif file (matrix)
2 C G T A C G T A C G T A C G A T A T G C C G T A A G C T A C G T G T A C G T A C T A C G T C G A G C T A C G T A G T A C C G T A 1e-12-2.835e+012.40%0.01%19.2bp (5.4bp)Barx1(Homeobox)/Stomach-Barx1.3xFlag-ChIP-Seq(GSE69483)/Homer(0.551)
More Information | Similar Motifs Found
motif file (matrix)
3 * G T A C C G T A C G T A T G C A C G T A C T G A A T C G A C T G A C T G A C G T 1e-10-2.529e+014.81%0.18%23.2bp (30.3bp)Sox2/MA0143.3/Jaspar(0.590)
More Information | Similar Motifs Found
motif file (matrix)
4 * A G T C C T A G A C T G A G T C C G T A C G T A A C T G A C T G A C T G A T C G 1e-9-2.144e+012.40%0.02%22.9bp (14.9bp)INSM1/MA0155.1/Jaspar(0.646)
More Information | Similar Motifs Found
motif file (matrix)
5 * A C T G C T A G A G T C A C G T A C T G A G T C A G T C G A T C C G T A A C T G A C G T A G T C C G T A 1e-9-2.112e+012.88%0.04%22.4bp (26.2bp)ZNF416(Zf)/HEK293-ZNF416.GFP-ChIP-Seq(GSE58341)/Homer(0.692)
More Information | Similar Motifs Found
motif file (matrix)
6 * A C G T A C T G C G T A C G T A C A T G C T G A A G C T C T G A G A T C C G T A 1e-8-1.863e+014.33%0.27%26.6bp (36.6bp)OCT:OCT(POU,Homeobox)/NPC-Brn1-ChIP-Seq(GSE35496)/Homer(0.702)
More Information | Similar Motifs Found
motif file (matrix)
7 * A C G T C G T A A C T G C T A G A C G T A C G T A C G T A C G T A C G T G T C A A C G T A G T C A C G T 1e-7-1.764e+011.92%0.01%26.7bp (2.5bp)GATA2/MA0036.2/Jaspar(0.691)
More Information | Similar Motifs Found
motif file (matrix)
8 * A C G T A G C T A C G T A C G T A T C G A C G T A C T G A C G T C G A T G T C A A C G T C T G A A C G T A C G T A C G T A C G T 1e-7-1.644e+012.40%0.05%22.4bp (29.9bp)PB0123.1_Foxl1_2/Jaspar(0.607)
More Information | Similar Motifs Found
motif file (matrix)
9 * C G T A A G T C G A T C A C G T G A T C A G C T A G T C G A C T C T A G A C T G C A T G C G A T A C G T C A T G C A G T C G A T 1e-6-1.607e+014.33%0.37%26.9bp (32.8bp)Hand1::Tcf3/MA0092.1/Jaspar(0.634)
More Information | Similar Motifs Found
motif file (matrix)
10 * A C T G A T C G G A C T A C G T A T C G A C G T C A G T A G T C C T A G G T C A 1e-6-1.592e+011.44%0.01%18.1bp (15.6bp)HOXD12/MA0873.1/Jaspar(0.556)
More Information | Similar Motifs Found
motif file (matrix)
11 * A C G T A C G T A C G T A C G T A C G T A G T C A C G T A C T G A C G T A C G T A C G T A C G T C G T A C G T A A G T C G T A C 1e-6-1.592e+011.44%0.01%9.9bp (0.0bp)PB0182.1_Srf_2/Jaspar(0.714)
More Information | Similar Motifs Found
motif file (matrix)
12 * A C G T A C G T A C G T A C G T A G C T A G C T G A T C G A C T A G T C A G T C T A G C A G T C G T A C 1e-3-8.956e+004.81%1.11%15.2bp (35.5bp)PB0186.1_Tcf3_2/Jaspar(0.668)
More Information | Similar Motifs Found
motif file (matrix)