Information for 5-GGTTGTTCGA (Motif 10)

A C T G A T C G G A C T A C G T A T C G A C G T C A G T A G T C C T A G G T C A
Reverse Opposite:
A C G T A G T C T C A G G C T A C G T A T A G C G T C A C T G A A T G C A G T C
p-value:1e-6
log p-value:-1.592e+01
Information Content per bp:1.739
Number of Target Sequences with motif3.0
Percentage of Target Sequences with motif1.44%
Number of Background Sequences with motif1.2
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets39.3 +/- 18.1bp
Average Position of motif in Background38.6 +/- 15.6bp
Strand Bias (log2 ratio + to - strand density)1.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

HOXD12/MA0873.1/Jaspar

Match Rank:1
Score:0.56
Offset:1
Orientation:reverse strand
Alignment:GGTTGTTCGA--
-NTTTTACGACT
 A C T G A T C G G A C T A C G T A T C G A C G T C A G T A G T C C T A G G T C A A C G T A C G T
A C G T C A G T C G A T G C A T A G C T G C A T C T G A A G T C A T C G T C G A A G T C A G C T

HOXC12/MA0906.1/Jaspar

Match Rank:2
Score:0.54
Offset:1
Orientation:reverse strand
Alignment:GGTTGTTCGA--
-NTTTTACGACC
 A C T G A T C G G A C T A C G T A T C G A C G T C A G T A G T C C T A G G T C A A C G T A C G T
A C G T C G A T C A G T C G A T G C A T C G A T T C G A A G T C C A T G C T G A A G T C G A T C

PH0077.1_Hoxd12/Jaspar

Match Rank:3
Score:0.54
Offset:-2
Orientation:reverse strand
Alignment:--GGTTGTTCGA-----
NNNATTTTACGACNNTN
 A C G T A C G T A C T G A T C G G A C T A C G T A T C G A C G T C A G T A G T C C T A G G T C A A C G T A C G T A C G T A C G T A C G T
G T C A C G T A C T A G C T G A C G A T C G A T C G A T C G A T C G T A A G T C C A T G C T G A A G T C A G T C G A C T C G A T C T A G

HOXC13/MA0907.1/Jaspar

Match Rank:4
Score:0.54
Offset:1
Orientation:reverse strand
Alignment:GGTTGTTCGA--
-NTTTTACGAGN
 A C T G A T C G G A C T A C G T A T C G A C G T C A G T A G T C C T A G G T C A A C G T A C G T
A C G T C G A T C G A T C G A T C G A T G C A T G T C A A G T C C T A G T C G A A T C G T G A C

PB0151.1_Myf6_2/Jaspar

Match Rank:5
Score:0.53
Offset:-5
Orientation:reverse strand
Alignment:-----GGTTGTTCGA
GGNGCGNCTGTTNNN
 A C G T A C G T A C G T A C G T A C G T A C T G A T C G G A C T A C G T A T C G A C G T C A G T A G T C C T A G G T C A
C T A G A C T G G A C T A T C G A T G C A T C G A C T G G A T C A G C T C T A G A C G T A G C T A C T G A T G C A G C T

PH0047.1_Hoxa11/Jaspar

Match Rank:6
Score:0.53
Offset:-1
Orientation:reverse strand
Alignment:-GGTTGTTCGA-----
NNGTTTTACGACTTTA
 A C G T A C T G A T C G G A C T A C G T A T C G A C G T C A G T A G T C C T A G G T C A A C G T A C G T A C G T A C G T A C G T
G T C A G A C T C T A G C G A T C A G T C G A T C G A T C G T A A G T C C A T G C T G A A G T C G A C T C G A T G A C T C G T A

HOXD11/MA0908.1/Jaspar

Match Rank:7
Score:0.53
Offset:1
Orientation:reverse strand
Alignment:GGTTGTTCGA-
-NTTTTACGAC
 A C T G A T C G G A C T A C G T A T C G A C G T C A G T A G T C C T A G G T C A A C G T
A C G T C G A T C G A T C G A T C G A T C G A T C G T A A G T C C T A G C G T A A G T C

AMYB(HTH)/Testes-AMYB-ChIP-Seq(GSE44588)/Homer

Match Rank:8
Score:0.53
Offset:-1
Orientation:forward strand
Alignment:-GGTTGTTCGA
TGGCAGTTGG-
 A C G T A C T G A T C G G A C T A C G T A T C G A C G T C A G T A G T C C T A G G T C A
G A C T C T A G C T A G A G T C T G C A A C T G A C G T A C G T C T A G T C A G A C G T

PH0065.1_Hoxc10/Jaspar

Match Rank:9
Score:0.53
Offset:-1
Orientation:reverse strand
Alignment:-GGTTGTTCGA-----
ANNTTTTACGACNTNN
 A C G T A C T G A T C G G A C T A C G T A T C G A C G T C A G T A G T C C T A G G T C A A C G T A C G T A C G T A C G T A C G T
T G C A T A G C C T A G G C A T C A G T C G A T C G A T C G T A A G T C A C T G C T G A A G T C G A C T G C A T G C A T C G T A

PB0149.1_Myb_2/Jaspar

Match Rank:10
Score:0.53
Offset:-4
Orientation:reverse strand
Alignment:----GGTTGTTCGA--
NNNTGGCAGTTGGTNN
 A C G T A C G T A C G T A C G T A C T G A T C G G A C T A C G T A T C G A C G T C A G T A G T C C T A G G T C A A C G T A C G T
C T A G T A G C T C G A G A C T C T A G C T A G A G T C C T G A A C T G A C G T G A C T C T A G T C A G C A G T G T A C T A C G