Information for 3-KYTTSTGKTMKRTTTT (Motif 8)

A C G T A G C T A C G T A C G T A T C G A C G T A C T G A C G T C G A T G T C A A C G T C T G A A C G T A C G T A C G T A C G T
Reverse Opposite:
C G T A C G T A C G T A C G T A A G C T T G C A A C G T C G T A G T C A A G T C C G T A T A G C C G T A C G T A T C G A G T C A
p-value:1e-7
log p-value:-1.644e+01
Information Content per bp:1.815
Number of Target Sequences with motif5.0
Percentage of Target Sequences with motif2.40%
Number of Background Sequences with motif11.3
Percentage of Background Sequences with motif0.05%
Average Position of motif in Targets35.8 +/- 22.4bp
Average Position of motif in Background62.5 +/- 29.9bp
Strand Bias (log2 ratio + to - strand density)0.6
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0123.1_Foxl1_2/Jaspar

Match Rank:1
Score:0.61
Offset:0
Orientation:reverse strand
Alignment:KYTTSTGKTMKRTTTT
NNTTTTGTTTTGATNT
 A C G T A G C T A C G T A C G T A T C G A C G T A C T G A C G T C G A T G T C A A C G T C T G A A C G T A C G T A C G T A C G T
C A G T C A T G G A C T C A G T G C A T G C A T T C A G A C G T C A G T C G A T C A G T C T A G G C T A G C A T G C T A C G A T

RUNX2(Runt)/PCa-RUNX2-ChIP-Seq(GSE33889)/Homer

Match Rank:2
Score:0.55
Offset:0
Orientation:reverse strand
Alignment:KYTTSTGKTMKRTTTT
NNHTGTGGTTWN----
 A C G T A G C T A C G T A C G T A T C G A C G T A C T G A C G T C G A T G T C A A C G T C T G A A C G T A C G T A C G T A C G T
C A T G C G A T G A C T A C G T A C T G A C G T A C T G A C T G A C G T A G C T C G A T A C T G A C G T A C G T A C G T A C G T

PB0119.1_Foxa2_2/Jaspar

Match Rank:3
Score:0.54
Offset:0
Orientation:reverse strand
Alignment:KYTTSTGKTMKRTTTT
NCNTTTGTTATTTNN-
 A C G T A G C T A C G T A C G T A T C G A C G T A C T G A C G T C G A T G T C A A C G T C T G A A C G T A C G T A C G T A C G T
A T G C A T G C A T C G A G C T C A G T C A G T C T A G G C A T G A C T T C G A C A G T G A C T G C A T A G C T A G C T A C G T

PB0141.1_Isgf3g_2/Jaspar

Match Rank:4
Score:0.54
Offset:4
Orientation:reverse strand
Alignment:KYTTSTGKTMKRTTTT--
----NNGTANTGTTTTNC
 A C G T A G C T A C G T A C G T A T C G A C G T A C T G A C G T C G A T G T C A A C G T C T G A A C G T A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T G A C T C T G A C A T G C G A T G T C A T G C A G C A T A T C G G A C T G C A T G C A T G C A T A T C G T G A C

MEF2C/MA0497.1/Jaspar

Match Rank:5
Score:0.53
Offset:7
Orientation:reverse strand
Alignment:KYTTSTGKTMKRTTTT------
-------TTCTATTTTTAGNNN
 A C G T A G C T A C G T A C G T A T C G A C G T A C T G A C G T C G A T G T C A A C G T C T G A A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T C G A T C A G T A G T C A G C T C T G A G C A T G C A T G A C T G A C T C G A T C T G A C A T G G T A C G C T A G A C T

FOXA1:AR(Forkhead,NR)/LNCAP-AR-ChIP-Seq(GSE27824)/Homer

Match Rank:6
Score:0.53
Offset:-2
Orientation:reverse strand
Alignment:--KYTTSTGKTMKRTTTT--
NNTGTTCTTTTTTGTTTACT
 A C G T A C G T A C G T A G C T A C G T A C G T A T C G A C G T A C T G A C G T C G A T G T C A A C G T C T G A A C G T A C G T A C G T A C G T A C G T A C G T
G C A T G C T A C G A T A T C G G C A T C G A T G A T C G A C T G C A T A G C T A G C T A G C T G C A T T C A G A C G T A C G T A C G T C T G A G A T C G C A T

RUNX1/MA0002.2/Jaspar

Match Rank:7
Score:0.53
Offset:0
Orientation:forward strand
Alignment:KYTTSTGKTMKRTTTT
GTCTGTGGTTT-----
 A C G T A G C T A C G T A C G T A T C G A C G T A C T G A C G T C G A T G T C A A C G T C T G A A C G T A C G T A C G T A C G T
A C T G A G C T A G T C C G A T A T C G G A C T A C T G A C T G A G C T G A C T C G A T A C G T A C G T A C G T A C G T A C G T

PB0121.1_Foxj3_2/Jaspar

Match Rank:8
Score:0.51
Offset:0
Orientation:reverse strand
Alignment:KYTTSTGKTMKRTTTT-
NNCTTTGTTTTGNTNNN
 A C G T A G C T A C G T A C G T A T C G A C G T A C T G A C G T C G A T G T C A A C G T C T G A A C G T A C G T A C G T A C G T A C G T
G C A T A T G C G T A C C G A T G C A T C G A T C T A G C G A T C A G T C G A T A C G T C T A G C A T G G A C T T A C G G C A T A C G T

RUNX3/MA0684.1/Jaspar

Match Rank:9
Score:0.51
Offset:1
Orientation:reverse strand
Alignment:KYTTSTGKTMKRTTTT
-TTTGCGGTTT-----
 A C G T A G C T A C G T A C G T A T C G A C G T A C T G A C G T C G A T G T C A A C G T C T G A A C G T A C G T A C G T A C G T
A C G T C G A T A G C T A C G T T A C G A G T C A T C G A C T G A C G T A G C T C G A T A C G T A C G T A C G T A C G T A C G T

RUNX(Runt)/HPC7-Runx1-ChIP-Seq(GSE22178)/Homer

Match Rank:10
Score:0.50
Offset:2
Orientation:reverse strand
Alignment:KYTTSTGKTMKRTTTT
--CTGTGGTTTN----
 A C G T A G C T A C G T A C G T A T C G A C G T A C T G A C G T C G A T G T C A A C G T C T G A A C G T A C G T A C G T A C G T
A C G T A C G T G A T C A C G T A C T G A G C T A C T G A C T G A G C T A G C T C G A T A T C G A C G T A C G T A C G T A C G T