Information for 1-KGYTKYCYAGTYA (Motif 5)

A C T G C T A G A G T C A C G T A C T G A G T C A G T C G A T C C G T A A C T G A C G T A G T C C G T A
Reverse Opposite:
A C G T C T A G C G T A A G T C A C G T C T A G A C T G C T A G G T A C C G T A C T A G A G T C G T A C
p-value:1e-9
log p-value:-2.112e+01
Information Content per bp:1.822
Number of Target Sequences with motif6.0
Percentage of Target Sequences with motif2.88%
Number of Background Sequences with motif10.2
Percentage of Background Sequences with motif0.04%
Average Position of motif in Targets38.7 +/- 22.4bp
Average Position of motif in Background55.2 +/- 26.2bp
Strand Bias (log2 ratio + to - strand density)-1.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

ZNF416(Zf)/HEK293-ZNF416.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:1
Score:0.69
Offset:3
Orientation:reverse strand
Alignment:KGYTKYCYAGTYA
---TGCCCAGNHW
 A C T G C T A G A G T C A C G T A C T G A G T C A G T C G A T C C G T A A C T G A C G T A G T C C G T A
A C G T A C G T A C G T C G A T C A T G A G T C G A T C G T A C G C T A C T A G C A T G G A T C C G T A

HMBOX1/MA0895.1/Jaspar

Match Rank:2
Score:0.62
Offset:5
Orientation:forward strand
Alignment:KGYTKYCYAGTYA--
-----ACTAGTTAAC
 A C T G C T A G A G T C A C G T A C T G A G T C A G T C G A T C C G T A A C T G A C G T A G T C C G T A A C G T A C G T
A C G T A C G T A C G T A C G T A C G T T G C A A G T C C G A T C T G A A T C G C G A T G C A T C G T A G T C A T A G C

PH0040.1_Hmbox1/Jaspar

Match Rank:3
Score:0.60
Offset:1
Orientation:forward strand
Alignment:KGYTKYCYAGTYA-----
-GAAAACTAGTTAACATC
 A C T G C T A G A G T C A C G T A C T G A G T C A G T C G A T C C G T A A C T G A C G T A G T C C G T A A C G T A C G T A C G T A C G T A C G T
A C G T T C A G G C T A C T G A C T G A C G T A A G T C A C G T C T G A C T A G A C G T G C A T C G T A C G T A A G T C C G T A C G A T A T G C

Bcl6/MA0463.1/Jaspar

Match Rank:4
Score:0.60
Offset:0
Orientation:reverse strand
Alignment:KGYTKYCYAGTYA-
NGCTTTCTAGGAAN
 A C T G C T A G A G T C A C G T A C T G A G T C A G T C G A T C C G T A A C T G A C G T A G T C C G T A A C G T
C G A T C A T G G T A C G A C T A G C T G A C T A G T C A G C T C G T A C T A G C A T G T C G A G C T A G T C A

LBX1/MA0618.1/Jaspar

Match Rank:5
Score:0.59
Offset:6
Orientation:reverse strand
Alignment:KGYTKYCYAGTYA-
------CTAATTAA
 A C T G C T A G A G T C A C G T A C T G A G T C A G T C G A T C C G T A A C T G A C G T A G T C C G T A A C G T
A C G T A C G T A C G T A C G T A C G T A C G T T A G C A G C T G C T A C T G A A C G T A C G T C T G A G C T A

Nfe2l2/MA0150.2/Jaspar

Match Rank:6
Score:0.58
Offset:3
Orientation:reverse strand
Alignment:KGYTKYCYAGTYA-----
---TGCTGAGTCATNNTG
 A C T G C T A G A G T C A C G T A C T G A G T C A G T C G A T C C G T A A C T G A C G T A G T C C G T A A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T G C A T A T C G A T G C G A C T C T A G C G T A T A C G A C G T G T A C C G T A A G C T A C T G A T G C G A C T C A T G

Rfx6(HTH)/Min6b1-Rfx6.HA-ChIP-Seq(GSE62844)/Homer

Match Rank:7
Score:0.58
Offset:0
Orientation:forward strand
Alignment:KGYTKYCYAGTYA--
TGTTKCCTAGCAACM
 A C T G C T A G A G T C A C G T A C T G A G T C A G T C G A T C C G T A A C T G A C G T A G T C C G T A A C G T A C G T
C A G T T C A G A G C T G A C T A C G T A G T C G A T C G A C T C T G A A C T G G A T C C G T A C T G A A G T C G T A C

BCL6B/MA0731.1/Jaspar

Match Rank:8
Score:0.58
Offset:0
Orientation:forward strand
Alignment:KGYTKYCYAGTYA----
TGCTTTCTAGGAATTCA
 A C T G C T A G A G T C A C G T A C T G A G T C A G T C G A T C C G T A A C T G A C G T A G T C C G T A A C G T A C G T A C G T A C G T
A G C T C T A G A G T C A C G T A C G T A C G T A G T C A C G T C G T A A C T G A C T G C T G A C G T A A G C T A G C T T G A C T G C A

Nrf2(bZIP)/Lymphoblast-Nrf2-ChIP-Seq(GSE37589)/Homer

Match Rank:9
Score:0.56
Offset:2
Orientation:forward strand
Alignment:KGYTKYCYAGTYA-
--HTGCTGAGTCAT
 A C T G C T A G A G T C A C G T A C T G A G T C A G T C G A T C C G T A A C T G A C G T A G T C C G T A A C G T
A C G T A C G T G T C A G C A T A C T G G T A C G A C T A C T G G C T A A T C G C A G T G T A C C G T A A G C T

SMAD3/MA0795.1/Jaspar

Match Rank:10
Score:0.56
Offset:3
Orientation:forward strand
Alignment:KGYTKYCYAGTYA
---CGTCTAGACA
 A C T G C T A G A G T C A C G T A C T G A G T C A G T C G A T C C G T A A C T G A C G T A G T C C G T A
A C G T A C G T A C G T G A T C C T A G C G A T T A G C A G C T T G C A A T C G G T C A G A T C G C T A