Information for 2-AAATCATTCMSAAACA (Motif 2)

C G T A C G T A C G T A C G A T A T G C C G T A A G C T A C G T G T A C G T A C T A C G T C G A G C T A C G T A G T A C C G T A
Reverse Opposite:
A C G T A C T G A C G T C A G T A G C T A T G C C A T G A C T G C G T A C T G A C G A T A T C G C G T A A C G T A C G T A C G T
p-value:1e-12
log p-value:-2.835e+01
Information Content per bp:1.750
Number of Target Sequences with motif5.0
Percentage of Target Sequences with motif2.40%
Number of Background Sequences with motif1.2
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets55.8 +/- 19.2bp
Average Position of motif in Background41.0 +/- 5.4bp
Strand Bias (log2 ratio + to - strand density)0.6
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Barx1(Homeobox)/Stomach-Barx1.3xFlag-ChIP-Seq(GSE69483)/Homer

Match Rank:1
Score:0.55
Offset:0
Orientation:forward strand
Alignment:AAATCATTCMSAAACA
AAACMATTAN------
 C G T A C G T A C G T A C G A T A T G C C G T A A G C T A C G T G T A C G T A C T A C G T C G A G C T A C G T A G T A C C G T A
T C G A C T G A C T G A A T G C G T A C G T C A A G C T A G C T C G T A T C A G A C G T A C G T A C G T A C G T A C G T A C G T

PB0141.1_Isgf3g_2/Jaspar

Match Rank:2
Score:0.55
Offset:-2
Orientation:forward strand
Alignment:--AAATCATTCMSAAACA
GCAAAACATTACTA----
 A C G T A C G T C G T A C G T A C G T A C G A T A T G C C G T A A G C T A C G T G T A C G T A C T A C G T C G A G C T A C G T A G T A C C G T A
A C T G T A G C C G T A C G T A C G T A C T G A T A G C C G T A A C G T C A G T C G T A G T A C G A C T C T G A A C G T A C G T A C G T A C G T

FOXA1:AR(Forkhead,NR)/LNCAP-AR-ChIP-Seq(GSE27824)/Homer

Match Rank:3
Score:0.54
Offset:-2
Orientation:forward strand
Alignment:--AAATCATTCMSAAACA--
AGTAAACAAAAAAGAACANN
 A C G T A C G T C G T A C G T A C G T A C G A T A T G C C G T A A G C T A C G T G T A C G T A C T A C G T C G A G C T A C G T A G T A C C G T A A C G T A C G T
C G T A C T A G G A C T G T C A G T C A C G T A A G T C C G T A T C G A T C G A T C G A C G T A C T G A C T A G G C T A C G T A T A G C C G T A C G A T C G T A

MF0010.1_Homeobox_class/Jaspar

Match Rank:4
Score:0.54
Offset:1
Orientation:reverse strand
Alignment:AAATCATTCMSAAACA
-AATTATT--------
 C G T A C G T A C G T A C G A T A T G C C G T A A G C T A C G T G T A C G T A C T A C G T C G A G C T A C G T A G T A C C G T A
A C G T G C T A G C T A G A C T G A C T C G T A G C A T C G A T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

PH0037.1_Hdx/Jaspar

Match Rank:5
Score:0.54
Offset:-6
Orientation:forward strand
Alignment:------AAATCATTCMSAAACA
AAGGCGAAATCATCGCA-----
 A C G T A C G T A C G T A C G T A C G T A C G T C G T A C G T A C G T A C G A T A T G C C G T A A G C T A C G T G T A C G T A C T A C G T C G A G C T A C G T A G T A C C G T A
C G T A C T G A A C T G C A T G G T A C C T A G T G C A C G T A C G T A A C G T A T G C G C T A G A C T G A T C A T C G G T A C T G C A A C G T A C G T A C G T A C G T A C G T

HNF1b(Homeobox)/PDAC-HNF1B-ChIP-Seq(GSE64557)/Homer

Match Rank:6
Score:0.54
Offset:-1
Orientation:reverse strand
Alignment:-AAATCATTCMSAAACA
TTAATNATTAAC-----
 A C G T C G T A C G T A C G T A C G A T A T G C C G T A A G C T A C G T G T A C G T A C T A C G T C G A G C T A C G T A G T A C C G T A
A C G T G A C T T C G A G T C A G C A T T A G C C G T A C A G T A G C T C G T A T G C A G A T C A C G T A C G T A C G T A C G T A C G T

HNF1A/MA0046.2/Jaspar

Match Rank:7
Score:0.52
Offset:-3
Orientation:forward strand
Alignment:---AAATCATTCMSAAACA
AGTTAATGATTAACT----
 A C G T A C G T A C G T C G T A C G T A C G T A C G A T A T G C C G T A A G C T A C G T G T A C G T A C T A C G T C G A G C T A C G T A G T A C C G T A
C T G A C T A G A G C T G C A T C T G A G T C A G C A T T A C G C G T A C A G T G A C T C G T A T C G A G T A C G C A T A C G T A C G T A C G T A C G T

Gfi1/MA0038.1/Jaspar

Match Rank:8
Score:0.51
Offset:-1
Orientation:forward strand
Alignment:-AAATCATTCMSAAACA
CAAATCACTG-------
 A C G T C G T A C G T A C G T A C G A T A T G C C G T A A G C T A C G T G T A C G T A C T A C G T C G A G C T A C G T A G T A C C G T A
A G T C T G C A C G T A C G T A C A G T G T A C G C T A T A G C G C A T T A C G A C G T A C G T A C G T A C G T A C G T A C G T A C G T

PB0135.1_Hoxa3_2/Jaspar

Match Rank:9
Score:0.50
Offset:-2
Orientation:forward strand
Alignment:--AAATCATTCMSAAACA
AAAAACCATTAAGG----
 A C G T A C G T C G T A C G T A C G T A C G A T A T G C C G T A A G C T A C G T G T A C G T A C T A C G T C G A G C T A C G T A G T A C C G T A
T C G A G T C A C T G A G C T A C G T A T G A C A G T C T G C A C G A T G C A T C G T A C T G A A T C G T C A G A C G T A C G T A C G T A C G T

HNF1B/MA0153.2/Jaspar

Match Rank:10
Score:0.50
Offset:-2
Orientation:reverse strand
Alignment:--AAATCATTCMSAAACA
GTTAATNATTAAC-----
 A C G T A C G T C G T A C G T A C G T A C G A T A T G C C G T A A G C T A C G T G T A C G T A C T A C G T C G A G C T A C G T A G T A C C G T A
C T A G A G C T G A C T C T G A G T C A G C A T A T G C C G T A C A G T G A C T C G T A T C G A G T A C A C G T A C G T A C G T A C G T A C G T