Homer de novo Motif Results (hs_ProstateCancer_VCaP_cancer_HDAC3_SRX059713_homermotifs_10_13_16/)

Known Motif Enrichment Results
Gene Ontology Enrichment Results
If Homer is having trouble matching a motif to a known motif, try copy/pasting the matrix file into STAMP
More information on motif finding results: HOMER | Description of Results | Tips
Total target sequences = 808
Total background sequences = 47351
* - possible false positive
RankMotifP-valuelog P-pvalue% of Targets% of Background STD(Bg STD) Best Match/DetailsMotif File
1 C G T A G C T A C G A T C G T A T A C G G T A C C G T A T C G A C G T A C T A G A G C T G T C A G T C A C G T A A G T C C G T A 1e-110-2.551e+0234.03%7.01%22.8bp (30.2bp)FOXA1(Forkhead)/LNCAP-FOXA1-ChIP-Seq(GSE27824)/Homer(0.960)
More Information | Similar Motifs Found
motif file (matrix)
2 T G C A A C G T A C G T A C G T A C G T C A G T C G T A A G C T C G T A A T C G 1e-18-4.206e+014.33%0.60%24.4bp (26.8bp)PH0078.1_Hoxd13/Jaspar(0.816)
More Information | Similar Motifs Found
motif file (matrix)
3 A C G T A C G T C G T A A T G C G T C A G T C A A T C G A G T C A C G T C T A G C G T A G A C T C G A T 1e-14-3.434e+011.36%0.03%16.9bp (17.2bp)TFAP4/MA0691.1/Jaspar(0.611)
More Information | Similar Motifs Found
motif file (matrix)
4 G A T C A G T C G T C A C G T A C G T A T C A G C A G T T C G A T G A C G T C A 1e-14-3.359e+015.94%1.50%24.5bp (29.7bp)HNF4a(NR),DR1/HepG2-HNF4a-ChIP-Seq(GSE25021)/Homer(0.785)
More Information | Similar Motifs Found
motif file (matrix)
5 C T A G A C T G A G T C A C G T A T G C A C G T A C T G A T G C T G A C C G T A C T G A G C T A A C T G 1e-13-3.104e+010.74%0.00%26.6bp (10.8bp)NF1-halfsite(CTF)/LNCaP-NF1-ChIP-Seq(Unpublished)/Homer(0.616)
More Information | Similar Motifs Found
motif file (matrix)
6 C T G A C T G A C G T A G T A C G C T A T A C G T A C G G C T A A G C T T A C G 1e-12-2.897e+018.04%2.86%22.9bp (30.4bp)Ets1-distal(ETS)/CD4+-PolII-ChIP-Seq(Barski_et_al.)/Homer(0.779)
More Information | Similar Motifs Found
motif file (matrix)
7 * A C G T A C T G A C G T G T A C A G T C A G T C C G T A A C T G A G T C A G T C C G T A C G T A A C T G 1e-10-2.517e+010.62%0.00%22.0bp (0.0bp)Zfp809(Zf)/ES-Zfp809-ChIP-Seq(GSE70799)/Homer(0.738)
More Information | Similar Motifs Found
motif file (matrix)
8 * A C T G A C T G A T G C G C T A A G T C T A G C A C G T A T C G A C T G T A G C A G T C A C G T A C T G A C G T G T A C A C G T 1e-10-2.517e+010.62%0.00%25.7bp (0.0bp)Zfx/MA0146.2/Jaspar(0.600)
More Information | Similar Motifs Found
motif file (matrix)
9 * C G A T A C T G A G C T A G T C A C G T A C T G A C T G A C G T A C T G C G T A A C G T C G T A T A G C A G T C C G T A A T C G 1e-10-2.517e+010.62%0.00%18.6bp (0.0bp)Smad2(MAD)/ES-SMAD2-ChIP-Seq(GSE29422)/Homer(0.609)
More Information | Similar Motifs Found
motif file (matrix)
10 * C T A G G T A C A G T C G T A C C G A T A T C G C A G T C T A G C G A T A C G T A C T G G T C A A G C T 1e-9-2.192e+012.35%0.36%26.5bp (27.2bp)SREBF2/MA0596.1/Jaspar(0.672)
More Information | Similar Motifs Found
motif file (matrix)
11 * C G T A C G T A C G T A A G T C A G T C G C T A A C G T A T C G C G T A C G T A C G T A T C G A A G T C 1e-9-2.180e+010.87%0.02%6.5bp (20.3bp)Barx1(Homeobox)/Stomach-Barx1.3xFlag-ChIP-Seq(GSE69483)/Homer(0.592)
More Information | Similar Motifs Found
motif file (matrix)
12 * T A G C C T G A A C T G C G T A G C A T T A G C C G A T A C T G A G C T A G T C 1e-9-2.099e+011.73%0.19%26.6bp (26.4bp)PH0140.1_Pknox1/Jaspar(0.657)
More Information | Similar Motifs Found
motif file (matrix)
13 * A G T C C G T A G T C A C G T A A G T C C G T A A C G T A G T C G T A C A G T C G T A C A C G T A G C T 1e-8-2.036e+010.74%0.01%21.0bp (21.2bp)PB0098.1_Zfp410_1/Jaspar(0.695)
More Information | Similar Motifs Found
motif file (matrix)
14 * A T C G A G T C G T A C C T A G A G C T A C G T A C G T A G T C A G C T A G T C A C G T A C T G A C G T 1e-8-1.948e+010.50%0.00%20.7bp (0.0bp)Spz1/MA0111.1/Jaspar(0.591)
More Information | Similar Motifs Found
motif file (matrix)
15 * A C T G A C T G C T A G A G T C G A C T C G A T A G T C A G T C A G T C C G T A A C T G A C T G A C T G A G T C A C G T A G T C 1e-8-1.948e+010.50%0.00%17.2bp (0.0bp)GLI3(Zf)/Limb-GLI3-ChIP-Chip(GSE11077)/Homer(0.616)
More Information | Similar Motifs Found
motif file (matrix)
16 * G C A T A G C T G T A C A G T C C G T A A C T G T C A G C G T A C G T A C T A G 1e-8-1.885e+013.22%0.81%23.1bp (28.6bp)Stat3(Stat)/mES-Stat3-ChIP-Seq(GSE11431)/Homer(0.904)
More Information | Similar Motifs Found
motif file (matrix)
17 * A C T G G T A C C G T A A C G T A T G C C G T A A C T G C G A T A C G T C T G A 1e-8-1.878e+010.87%0.03%28.4bp (28.7bp)Atf4(bZIP)/MEF-Atf4-ChIP-Seq(GSE35681)/Homer(0.693)
More Information | Similar Motifs Found
motif file (matrix)
18 * A C T G A T G C G T A C A G C T C T A G A T C G T A G C A G T C C T G A C A T G C T A G A G T C T A C G 1e-7-1.813e+011.49%0.16%26.3bp (26.6bp)p53(p53)/mES-cMyc-ChIP-Seq(GSE11431)/Homer(0.687)
More Information | Similar Motifs Found
motif file (matrix)
19 * A G T C T C A G T G C A C T A G T C A G C T A G C G T A T C A G T A C G C T A G 1e-6-1.421e+0110.15%5.75%25.6bp (27.2bp)SP1/MA0079.3/Jaspar(0.755)
More Information | Similar Motifs Found
motif file (matrix)
20 * A C T G A G T C C G T A C T G A A T G C C G T A A C T G A G T C G C T A C T A G A G T C C G A T A C T G A G C T A C G T A C T G 1e-5-1.196e+010.37%0.01%35.9bp (0.0bp)PB0003.1_Ascl2_1/Jaspar(0.737)
More Information | Similar Motifs Found
motif file (matrix)