Information for 6-TGTCTGGTGATACCAG (Motif 9)

C G A T A C T G A G C T A G T C A C G T A C T G A C T G A C G T A C T G C G T A A C G T C G T A T A G C A G T C C G T A A T C G
Reverse Opposite:
A T G C A C G T A C T G A T C G A C G T G T C A A C G T A G T C C G T A A G T C A G T C C G T A A C T G C T G A A G T C C G T A
p-value:1e-10
log p-value:-2.517e+01
Information Content per bp:1.910
Number of Target Sequences with motif5.0
Percentage of Target Sequences with motif0.62%
Number of Background Sequences with motif0.7
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets51.4 +/- 18.6bp
Average Position of motif in Background13.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)0.6
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Smad2(MAD)/ES-SMAD2-ChIP-Seq(GSE29422)/Homer

Match Rank:1
Score:0.61
Offset:-1
Orientation:forward strand
Alignment:-TGTCTGGTGATACCAG
CTGTCTGG---------
 A C G T C G A T A C T G A G C T A G T C A C G T A C T G A C T G A C G T A C T G C G T A A C G T C G T A T A G C A G T C C G T A A T C G
A T G C G A C T A C T G C A G T G A T C A C G T T A C G T A C G A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

PB0060.1_Smad3_1/Jaspar

Match Rank:2
Score:0.61
Offset:-5
Orientation:reverse strand
Alignment:-----TGTCTGGTGATACCAG
NNTNNTGTCTGGNNTNG----
 A C G T A C G T A C G T A C G T A C G T C G A T A C T G A G C T A G T C A C G T A C T G A C T G A C G T A C T G C G T A A C G T C G T A T A G C A G T C C G T A A T C G
C A G T A T C G C G A T T C A G T G C A G A C T A C T G C A G T A G T C A C G T T C A G T C A G G C T A G C A T C G A T G A C T C A T G A C G T A C G T A C G T A C G T

Smad4(MAD)/ESC-SMAD4-ChIP-Seq(GSE29422)/Homer

Match Rank:3
Score:0.59
Offset:-3
Orientation:forward strand
Alignment:---TGTCTGGTGATACCAG
VBSYGTCTGG---------
 A C G T A C G T A C G T C G A T A C T G A G C T A G T C A C G T A C T G A C T G A C G T A C T G C G T A A C G T C G T A T A G C A G T C C G T A A T C G
T A C G A T C G T A G C G A T C A C T G A C G T A G T C A C G T C T A G A T C G A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

Smad3(MAD)/NPC-Smad3-ChIP-Seq(GSE36673)/Homer

Match Rank:4
Score:0.56
Offset:-1
Orientation:forward strand
Alignment:-TGTCTGGTGATACCAG
TWGTCTGV---------
 A C G T C G A T A C T G A G C T A G T C A C G T A C T G A C T G A C G T A C T G C G T A A C G T C G T A T A G C A G T C C G T A A T C G
A G C T G C A T A C T G A C G T A G T C A C G T C T A G T A C G A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

GATA:SCL(Zf,bHLH)/Ter119-SCL-ChIP-Seq(GSE18720)/Homer

Match Rank:5
Score:0.55
Offset:-1
Orientation:reverse strand
Alignment:-TGTCTGGTGATACCAG---
TTATCTGNNNNCNNCAGCNG
 A C G T C G A T A C T G A G C T A G T C A C G T A C T G A C T G A C G T A C T G C G T A A C G T C G T A T A G C A G T C C G T A A T C G A C G T A C G T A C G T
G A C T G C A T C T G A A C G T A G T C C G A T A T C G G A C T A T C G T A G C T A G C T A G C G T A C T A C G G T A C C G T A A T C G T A G C G A T C A C T G

PH0161.1_Six1/Jaspar

Match Rank:6
Score:0.55
Offset:2
Orientation:reverse strand
Alignment:TGTCTGGTGATACCAG---
--ANNNATGATACCCCATC
 C G A T A C T G A G C T A G T C A C G T A C T G A C T G A C G T A C T G C G T A A C G T C G T A T A G C A G T C C G T A A T C G A C G T A C G T A C G T
A C G T A C G T G T C A T G C A C G T A G T C A C T G A G A C T C A T G C G T A A G C T G T C A A G T C A T G C A G T C A G T C G C T A C G A T G A T C

PH0162.1_Six2/Jaspar

Match Rank:7
Score:0.55
Offset:2
Orientation:reverse strand
Alignment:TGTCTGGTGATACCAG---
--ANANGTGATACCCCATT
 C G A T A C T G A G C T A G T C A C G T A C T G A C T G A C G T A C T G C G T A A C G T C G T A T A G C A G T C C G T A A T C G A C G T A C G T A C G T
A C G T A C G T G T C A C T G A C G T A G T A C C T A G A G C T C A T G C G T A A G C T G T C A A G T C T G A C A G T C A G T C G T C A C G A T G A C T

GATA1::TAL1/MA0140.2/Jaspar

Match Rank:8
Score:0.54
Offset:-2
Orientation:forward strand
Alignment:--TGTCTGGTGATACCAG
CTTATCTGTGAGGAGCAG
 A C G T A C G T C G A T A C T G A G C T A G T C A C G T A C T G A C T G A C G T A C T G C G T A A C G T C G T A T A G C A G T C C G T A A T C G
T G A C G A C T C G A T C G T A A C G T A G T C G C A T A T C G A C G T T C A G G T C A T A C G T C A G G C T A T C A G T G A C C G T A A T C G

Six3/MA0631.1/Jaspar

Match Rank:9
Score:0.53
Offset:2
Orientation:reverse strand
Alignment:TGTCTGGTGATACCAG---
--ANANGTGATACCCTATN
 C G A T A C T G A G C T A G T C A C G T A C T G A C T G A C G T A C T G C G T A A C G T C G T A T A G C A G T C C G T A A T C G A C G T A C G T A C G T
A C G T A C G T T G C A C G A T G C A T C G T A C T A G A C G T C A T G C G T A A G C T G T C A A G T C G T A C A G T C A G C T G C T A C G A T G A T C

PH0163.1_Six3/Jaspar

Match Rank:10
Score:0.53
Offset:2
Orientation:reverse strand
Alignment:TGTCTGGTGATACCAG---
--ANANGTGATACCCTATN
 C G A T A C T G A G C T A G T C A C G T A C T G A C T G A C G T A C T G C G T A A C G T C G T A T A G C A G T C C G T A A T C G A C G T A C G T A C G T
A C G T A C G T T G C A C G A T G C A T C G T A C T A G A C G T C A T G C G T A A G C T G T C A A G T C G T A C A G T C A G C T G C T A C G A T G A T C