Information for 1-WNWNNHAAAGTAAACA (Motif 1)

C G T A G C T A C G A T C G T A T A C G G T A C C G T A T C G A C G T A C T A G A G C T G T C A G T C A C G T A A G T C C G T A
Reverse Opposite:
A C G T C T A G A C G T A C G T A C G T C T G A G A T C G C A T A G C T C G A T C A T G A G T C G C A T G C T A C A G T G C A T
p-value:1e-110
log p-value:-2.551e+02
Information Content per bp:1.583
Number of Target Sequences with motif275.0
Percentage of Target Sequences with motif34.03%
Number of Background Sequences with motif3318.6
Percentage of Background Sequences with motif7.01%
Average Position of motif in Targets51.0 +/- 22.8bp
Average Position of motif in Background50.4 +/- 30.2bp
Strand Bias (log2 ratio + to - strand density)0.4
Multiplicity (# of sites on avg that occur together)1.13
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

FOXA1(Forkhead)/LNCAP-FOXA1-ChIP-Seq(GSE27824)/Homer

Match Rank:1
Score:0.96
Offset:6
Orientation:forward strand
Alignment:WNWNNHAAAGTAAACA
------AAAGTAAACA
 C G T A G C T A C G A T C G T A T A C G G T A C C G T A T C G A C G T A C T A G A G C T G T C A G T C A C G T A A G T C C G T A
A C G T A C G T A C G T A C G T A C G T A C G T G C T A T C G A C G T A C T A G A G C T G T C A G T C A C G T A A G T C C G T A

FOXA1(Forkhead)/MCF7-FOXA1-ChIP-Seq(GSE26831)/Homer

Match Rank:2
Score:0.96
Offset:6
Orientation:forward strand
Alignment:WNWNNHAAAGTAAACA
------AAAGTAAACA
 C G T A G C T A C G A T C G T A T A C G G T A C C G T A T C G A C G T A C T A G A G C T G T C A G T C A C G T A A G T C C G T A
A C G T A C G T A C G T A C G T A C G T A C G T G C T A T C G A C G T A C T A G A G C T G T C A G T C A C G T A A G T C C G T A

FOXA1/MA0148.3/Jaspar

Match Rank:3
Score:0.95
Offset:5
Orientation:reverse strand
Alignment:WNWNNHAAAGTAAACA----
-----CAAAGTAAACANNNN
 C G T A G C T A C G A T C G T A T A C G G T A C C G T A T C G A C G T A C T A G A G C T G T C A G T C A C G T A A G T C C G T A A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T G T A C G C T A T C G A C G T A C T A G A G C T G T C A G T C A C G T A A G T C G C T A C G A T T A C G T C A G C T G A

Foxa2/MA0047.2/Jaspar

Match Rank:4
Score:0.95
Offset:4
Orientation:reverse strand
Alignment:WNWNNHAAAGTAAACA
----NCTAAGTAAACA
 C G T A G C T A C G A T C G T A T A C G G T A C C G T A T C G A C G T A C T A G A G C T G T C A G T C A C G T A A G T C C G T A
A C G T A C G T A C G T A C G T T A G C G T A C G C A T T C G A C G T A C T A G A G C T G T C A T G C A C G T A A G T C C G T A

FOXM1(Forkhead)/MCF7-FOXM1-ChIP-Seq(GSE72977)/Homer

Match Rank:5
Score:0.94
Offset:6
Orientation:reverse strand
Alignment:WNWNNHAAAGTAAACA
------WAAGTAAAYA
 C G T A G C T A C G A T C G T A T A C G G T A C C G T A T C G A C G T A C T A G A G C T G T C A G T C A C G T A A G T C C G T A
A C G T A C G T A C G T A C G T A C G T A C G T G C A T T C G A C T G A T C A G A G C T G T C A G T C A C T G A A G T C T G C A

Foxa3(Forkhead)/Liver-Foxa3-ChIP-Seq(GSE77670)/Homer

Match Rank:6
Score:0.94
Offset:4
Orientation:reverse strand
Alignment:WNWNNHAAAGTAAACA---
----NCWRWGTAAACANSV
 C G T A G C T A C G A T C G T A T A C G G T A C C G T A T C G A C G T A C T A G A G C T G T C A G T C A C G T A A G T C C G T A A C G T A C G T A C G T
A C G T A C G T A C G T A C G T T G A C G A T C G C A T C T G A C G A T C T A G A G C T G T C A G T C A C G T A A G T C C G T A C G T A A T C G T C A G

FOXC2/MA0846.1/Jaspar

Match Rank:7
Score:0.92
Offset:6
Orientation:forward strand
Alignment:WNWNNHAAAGTAAACA--
------TAAGTAAACAAA
 C G T A G C T A C G A T C G T A T A C G G T A C C G T A T C G A C G T A C T A G A G C T G T C A G T C A C G T A A G T C C G T A A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T G C A T C T G A G C T A T C A G G A C T G T C A G T C A C T G A A G T C C T G A G C T A G C T A

Foxa2(Forkhead)/Liver-Foxa2-ChIP-Seq(GSE25694)/Homer

Match Rank:8
Score:0.92
Offset:6
Orientation:reverse strand
Alignment:WNWNNHAAAGTAAACA--
------TATGTAAACANG
 C G T A G C T A C G A T C G T A T A C G G T A C C G T A T C G A C G T A C T A G A G C T G T C A G T C A C G T A A G T C C G T A A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T G C A T T C G A C G A T C T A G A G C T G T C A G T C A C G T A A G T C C G T A C T G A T A C G

Fox:Ebox(Forkhead,bHLH)/Panc1-Foxa2-ChIP-Seq(GSE47459)/Homer

Match Rank:9
Score:0.91
Offset:1
Orientation:forward strand
Alignment:WNWNNHAAAGTAAACA--
-NNNVCTGWGYAAACASN
 C G T A G C T A C G A T C G T A T A C G G T A C C G T A T C G A C G T A C T A G A G C T G T C A G T C A C G T A A G T C C G T A A C G T A C G T
A C G T A T G C C T G A A T C G T A C G A G T C C G A T T C A G C G A T C T A G A G C T G T C A G T C A C G T A A G T C C G T A T A C G C T G A

MF0005.1_Forkhead_class/Jaspar

Match Rank:10
Score:0.91
Offset:7
Orientation:reverse strand
Alignment:WNWNNHAAAGTAAACA
-------AAATAAACA
 C G T A G C T A C G A T C G T A T A C G G T A C C G T A T C G A C G T A C T A G A G C T G T C A G T C A C G T A A G T C C G T A
A C G T A C G T A C G T A C G T A C G T A C G T A C G T T C G A G T C A T C G A G A C T G T C A C T G A T C G A G A T C C G T A