Information for 5-GGCHCVTGGCCTGTCT (Motif 8)

A C T G A C T G A T G C G C T A A G T C T A G C A C G T A T C G A C T G T A G C A G T C A C G T A C T G A C G T G T A C A C G T
Reverse Opposite:
C G T A A C T G C G T A A G T C C G T A A C T G A T C G G T A C T A G C G T C A A T C G A C T G C A G T A T C G A G T C G T A C
p-value:1e-10
log p-value:-2.517e+01
Information Content per bp:1.797
Number of Target Sequences with motif5.0
Percentage of Target Sequences with motif0.62%
Number of Background Sequences with motif0.7
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets65.6 +/- 25.7bp
Average Position of motif in Background12.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)1.3
Multiplicity (# of sites on avg that occur together)1.40
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Zfx/MA0146.2/Jaspar

Match Rank:1
Score:0.60
Offset:-1
Orientation:forward strand
Alignment:-GGCHCVTGGCCTGTCT
GGGGCCGAGGCCTG---
 A C G T A C T G A C T G A T G C G C T A A G T C T A G C A C G T A T C G A C T G T A G C A G T C A C G T A C T G A C G T G T A C A C G T
A T C G A T C G T A C G C T A G A T G C G A T C A C T G T G C A T C A G A T C G A G T C A G T C A G C T T A C G A C G T A C G T A C G T

POL009.1_DCE_S_II/Jaspar

Match Rank:2
Score:0.60
Offset:9
Orientation:forward strand
Alignment:GGCHCVTGGCCTGTCT
---------GCTGTG-
 A C T G A C T G A T G C G C T A A G T C T A G C A C G T A T C G A C T G T A G C A G T C A C G T A C T G A C G T G T A C A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T T A C G T A G C C A G T A T C G G A C T A T C G A C G T

Smad2(MAD)/ES-SMAD2-ChIP-Seq(GSE29422)/Homer

Match Rank:3
Score:0.57
Offset:10
Orientation:forward strand
Alignment:GGCHCVTGGCCTGTCT--
----------CTGTCTGG
 A C T G A C T G A T G C G C T A A G T C T A G C A C G T A T C G A C T G T A G C A G T C A C G T A C T G A C G T G T A C A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A T G C G A C T A C T G C A G T G A T C A C G T T A C G T A C G

Smad4(MAD)/ESC-SMAD4-ChIP-Seq(GSE29422)/Homer

Match Rank:4
Score:0.57
Offset:8
Orientation:forward strand
Alignment:GGCHCVTGGCCTGTCT--
--------VBSYGTCTGG
 A C T G A C T G A T G C G C T A A G T C T A G C A C G T A T C G A C T G T A G C A G T C A C G T A C T G A C G T G T A C A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T T A C G A T C G T A G C G A T C A C T G A C G T A G T C A C G T C T A G A T C G

PB0060.1_Smad3_1/Jaspar

Match Rank:5
Score:0.55
Offset:6
Orientation:reverse strand
Alignment:GGCHCVTGGCCTGTCT-------
------NNTNNTGTCTGGNNTNG
 A C T G A C T G A T G C G C T A A G T C T A G C A C G T A T C G A C T G T A G C A G T C A C G T A C T G A C G T G T A C A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T C A G T A T C G C G A T T C A G T G C A G A C T A C T G C A G T A G T C A C G T T C A G T C A G G C T A G C A T C G A T G A C T C A T G

MEIS2/MA0774.1/Jaspar

Match Rank:6
Score:0.54
Offset:9
Orientation:reverse strand
Alignment:GGCHCVTGGCCTGTCT-
---------GCTGTCAA
 A C T G A C T G A T G C G C T A A G T C T A G C A C G T A T C G A C T G T A G C A G T C A C G T A C T G A C G T G T A C A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A T C G A T G C A C G T C A T G G C A T A G T C G T C A G C T A

PH0141.1_Pknox2/Jaspar

Match Rank:7
Score:0.53
Offset:4
Orientation:forward strand
Alignment:GGCHCVTGGCCTGTCT----
----AAGCACCTGTCAATAT
 A C T G A C T G A T G C G C T A A G T C T A G C A C G T A T C G A C T G T A G C A G T C A C G T A C T G A C G T G T A C A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T G C T A C T G A T C A G A T G C T C G A T A G C G T A C A G C T A C T G G A C T A G T C C T G A G T C A G C A T G C T A A G C T

MEIS3/MA0775.1/Jaspar

Match Rank:8
Score:0.52
Offset:9
Orientation:reverse strand
Alignment:GGCHCVTGGCCTGTCT-
---------CCTGTCAA
 A C T G A C T G A T G C G C T A A G T C T A G C A C G T A T C G A C T G T A G C A G T C A C G T A C T G A C G T G T A C A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T T A G C T G A C G A C T C T A G G A C T A T G C C G T A G C T A

Smad3(MAD)/NPC-Smad3-ChIP-Seq(GSE36673)/Homer

Match Rank:9
Score:0.51
Offset:10
Orientation:forward strand
Alignment:GGCHCVTGGCCTGTCT--
----------TWGTCTGV
 A C T G A C T G A T G C G C T A A G T C T A G C A C G T A T C G A C T G T A G C A G T C A C G T A C T G A C G T G T A C A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A G C T G C A T A C T G A C G T A G T C A C G T C T A G T A C G

ZFX(Zf)/mES-Zfx-ChIP-Seq(GSE11431)/Homer

Match Rank:10
Score:0.51
Offset:4
Orientation:reverse strand
Alignment:GGCHCVTGGCCTGTCT
----CNAGGCCT----
 A C T G A C T G A T G C G C T A A G T C T A G C A C G T A T C G A C T G T A G C A G T C A C G T A C T G A C G T G T A C A C G T
A C G T A C G T A C G T A C G T A T G C G A T C C T G A A C T G A C T G A G T C A G T C A G C T A C G T A C G T A C G T A C G T