Information for 9-GCATCAGTKA (Motif 17)

A C T G G T A C C G T A A C G T A T G C C G T A A C T G C G A T A C G T C T G A
Reverse Opposite:
A G C T G T C A C G T A G T A C A C G T A T C G G T C A A C G T A C T G G T A C
p-value:1e-8
log p-value:-1.878e+01
Information Content per bp:1.787
Number of Target Sequences with motif7.0
Percentage of Target Sequences with motif0.87%
Number of Background Sequences with motif14.8
Percentage of Background Sequences with motif0.03%
Average Position of motif in Targets51.0 +/- 28.4bp
Average Position of motif in Background64.8 +/- 28.7bp
Strand Bias (log2 ratio + to - strand density)2.6
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Atf4(bZIP)/MEF-Atf4-ChIP-Seq(GSE35681)/Homer

Match Rank:1
Score:0.69
Offset:-3
Orientation:reverse strand
Alignment:---GCATCAGTKA
ATTGCATCAK---
 A C G T A C G T A C G T A C T G G T A C C G T A A C G T A T G C C G T A A C T G C G A T A C G T C T G A
T C G A A C G T A C G T C T A G A G T C T C G A G C A T G T A C C T G A A C G T A C G T A C G T A C G T

Chop(bZIP)/MEF-Chop-ChIP-Seq(GSE35681)/Homer

Match Rank:2
Score:0.68
Offset:-3
Orientation:forward strand
Alignment:---GCATCAGTKA
ATTGCATCAT---
 A C G T A C G T A C G T A C T G G T A C C G T A A C G T A T G C C G T A A C T G C G A T A C G T C T G A
T C G A G C A T A C G T C T A G G T A C T C G A G C A T T G A C T C G A A C G T A C G T A C G T A C G T

PH0134.1_Pbx1/Jaspar

Match Rank:3
Score:0.61
Offset:-4
Orientation:forward strand
Alignment:----GCATCAGTKA---
TCACCCATCAATAAACA
 A C G T A C G T A C G T A C G T A C T G G T A C C G T A A C G T A T G C C G T A A C T G C G A T A C G T C T G A A C G T A C G T A C G T
G A C T A G T C C G T A G A T C G T A C T G A C C T G A C G A T G T A C G T C A G C T A C G A T G T A C G C T A C G A T T G A C T G C A

Pax7(Paired,Homeobox)/Myoblast-Pax7-ChIP-Seq(GSE25064)/Homer

Match Rank:4
Score:0.61
Offset:0
Orientation:forward strand
Alignment:GCATCAGTKA
TAATCAATTA
 A C T G G T A C C G T A A C G T A T G C C G T A A C T G C G A T A C G T C T G A
C G A T C T G A C G T A A G C T A G T C T G C A C T G A A C G T A G C T G C T A

PB0176.1_Sox5_2/Jaspar

Match Rank:5
Score:0.61
Offset:-2
Orientation:forward strand
Alignment:--GCATCAGTKA---
TATCATAATTAAGGA
 A C G T A C G T A C T G G T A C C G T A A C G T A T G C C G T A A C T G C G A T A C G T C T G A A C G T A C G T A C G T
C G A T G C T A C G A T A G T C C T G A C A G T T G C A G C T A G C A T G A C T C G T A T G C A T A C G C A T G C G T A

PB0144.1_Lef1_2/Jaspar

Match Rank:6
Score:0.60
Offset:-2
Orientation:forward strand
Alignment:--GCATCAGTKA----
GAAGATCAATCACTTA
 A C G T A C G T A C T G G T A C C G T A A C G T A T G C C G T A A C T G C G A T A C G T C T G A A C G T A C G T A C G T A C G T
T A C G C G T A T C G A T A C G G C T A C G A T A G T C C G T A C T G A C A G T G A T C C T G A G T A C A G C T G C A T C G T A

Pax6/MA0069.1/Jaspar

Match Rank:7
Score:0.60
Offset:-5
Orientation:forward strand
Alignment:-----GCATCAGTKA
TTCACGCATGAGTT-
 A C G T A C G T A C G T A C G T A C G T A C T G G T A C C G T A A C G T A T G C C G T A A C T G C G A T A C G T C T G A
A C G T G A C T G A T C G T C A G A T C C A T G A T G C C G T A A G C T A T C G C T G A T A C G A G C T C A G T A C G T

CEBP:AP1(bZIP)/ThioMac-CEBPb-ChIP-Seq(GSE21512)/Homer

Match Rank:8
Score:0.60
Offset:-2
Orientation:reverse strand
Alignment:--GCATCAGTKA
TTGCAACATN--
 A C G T A C G T A C T G G T A C C G T A A C G T A T G C C G T A A C T G C G A T A C G T C T G A
C A G T A C G T C T A G A G T C G T C A C G T A G A T C G C T A A G C T G A T C A C G T A C G T

PAX6(Paired,Homeobox)/Forebrain-Pax6-ChIP-Seq(GSE66961)/Homer

Match Rank:9
Score:0.60
Offset:-5
Orientation:reverse strand
Alignment:-----GCATCAGTKA-----
TTTMCGCTTSABTGAACACN
 A C G T A C G T A C G T A C G T A C G T A C T G G T A C C G T A A C G T A T G C C G T A A C T G C G A T A C G T C T G A A C G T A C G T A C G T A C G T A C G T
A G C T C A G T G A C T T G A C G A T C T C A G A T G C G C A T A G C T T A C G C T G A A T C G G A C T C T A G T G C A T C G A A G T C G C T A A T G C T C G A

ATF4/MA0833.1/Jaspar

Match Rank:10
Score:0.59
Offset:-4
Orientation:reverse strand
Alignment:----GCATCAGTKA
TATTGCATCATCC-
 A C G T A C G T A C G T A C G T A C T G G T A C C G T A A C G T A T G C C G T A A C T G C G A T A C G T C T G A
A C G T T C G A C G A T C A G T C T A G G T A C T C G A C G A T G A T C G T C A A C G T G T A C G A T C A C G T