Information for 5-GGCTCTGCMAAAG (Motif 5)

C T A G A C T G A G T C A C G T A T G C A C G T A C T G A T G C T G A C C G T A C T G A G C T A A C T G
Reverse Opposite:
T A G C C G A T A G C T A C G T A C T G A T C G A G T C C G T A A T C G T G C A C T A G T G A C A G T C
p-value:1e-13
log p-value:-3.104e+01
Information Content per bp:1.782
Number of Target Sequences with motif6.0
Percentage of Target Sequences with motif0.74%
Number of Background Sequences with motif1.3
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets40.8 +/- 26.6bp
Average Position of motif in Background58.7 +/- 10.8bp
Strand Bias (log2 ratio + to - strand density)2.3
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

NF1-halfsite(CTF)/LNCaP-NF1-ChIP-Seq(Unpublished)/Homer

Match Rank:1
Score:0.62
Offset:4
Orientation:forward strand
Alignment:GGCTCTGCMAAAG
----TTGCCAAG-
 C T A G A C T G A G T C A C G T A T G C A C G T A C T G A T G C T G A C C G T A C T G A G C T A A C T G
A C G T A C G T A C G T A C G T A G C T A C G T A C T G A T G C A G T C C G T A C T G A T A C G A C G T

Hand1::Tcf3/MA0092.1/Jaspar

Match Rank:2
Score:0.60
Offset:1
Orientation:forward strand
Alignment:GGCTCTGCMAAAG
-GGTCTGGCAT--
 C T A G A C T G A G T C A C G T A T G C A C G T A C T G A T G C T G A C C G T A C T G A G C T A A C T G
A C G T A T C G C T A G G A C T A G T C A C G T A C T G A T C G G T A C C G T A C G A T A C G T A C G T

NFATC2/MA0152.1/Jaspar

Match Rank:3
Score:0.59
Offset:5
Orientation:reverse strand
Alignment:GGCTCTGCMAAAG
-----TGGAAAA-
 C T A G A C T G A G T C A C G T A T G C A C G T A C T G A T G C T G A C C G T A C T G A G C T A A C T G
A C G T A C G T A C G T A C G T A C G T C G A T A C T G A C T G C G T A C G T A T C G A G C T A A C G T

NFIA/MA0670.1/Jaspar

Match Rank:4
Score:0.58
Offset:3
Orientation:forward strand
Alignment:GGCTCTGCMAAAG
---GGTGCCAAGT
 C T A G A C T G A G T C A C G T A T G C A C G T A C T G A T G C T G A C C G T A C T G A G C T A A C T G
A C G T A C G T A C G T T C A G C A T G A C G T A C T G A G T C A G T C C G T A C G T A T C A G C G A T

Rbpj1(?)/Panc1-Rbpj1-ChIP-Seq(GSE47459)/Homer

Match Rank:5
Score:0.56
Offset:3
Orientation:reverse strand
Alignment:GGCTCTGCMAAAG
---CSTGGGAAAD
 C T A G A C T G A G T C A C G T A T G C A C G T A C T G A T G C T G A C C G T A C T G A G C T A A C T G
A C G T A C G T A C G T A G T C T A C G C G A T A C T G C T A G A C T G C G T A C T G A G T C A C T G A

Stat5a::Stat5b/MA0519.1/Jaspar

Match Rank:6
Score:0.55
Offset:2
Orientation:reverse strand
Alignment:GGCTCTGCMAAAG
--TTCTTGGAAAN
 C T A G A C T G A G T C A C G T A T G C A C G T A C T G A T G C T G A C C G T A C T G A G C T A A C T G
A C G T A C G T A G C T C G A T A G T C G A C T C A G T C T A G C T A G C T G A C G T A T C G A G A C T

STAT3/MA0144.2/Jaspar

Match Rank:7
Score:0.55
Offset:1
Orientation:forward strand
Alignment:GGCTCTGCMAAAG
-CTTCTGGGAAA-
 C T A G A C T G A G T C A C G T A T G C A C G T A C T G A T G C T G A C C G T A C T G A G C T A A C T G
A C G T A G T C C G A T A C G T G A T C G A C T C A T G C T A G C T A G C G T A C G T A C T G A A C G T

PB0195.1_Zbtb3_2/Jaspar

Match Rank:8
Score:0.55
Offset:-2
Orientation:forward strand
Alignment:--GGCTCTGCMAAAG-
CAATCACTGGCAGAAT
 A C G T A C G T C T A G A C T G A G T C A C G T A T G C A C G T A C T G A T G C T G A C C G T A C T G A G C T A A C T G A C G T
A G T C G C T A T C G A G C A T G T A C C T G A T G A C C G A T A C T G A C T G A G T C C T G A C T A G G C T A C G T A C G A T

ZNF322(Zf)/HEK293-ZNF322.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:9
Score:0.55
Offset:-3
Orientation:reverse strand
Alignment:---GGCTCTGCMAAAG----
YCAGGCWCAGTACCAGGCTC
 A C G T A C G T A C G T C T A G A C T G A G T C A C G T A T G C A C G T A C T G A T G C T G A C C G T A C T G A G C T A A C T G A C G T A C G T A C G T A C G T
A G T C T G A C G C T A C T A G C T A G G A T C G C A T A T G C C G T A C T A G C A G T T C G A A T G C A G T C C G T A C A T G C T A G G T A C G A C T A T G C

MEIS2/MA0774.1/Jaspar

Match Rank:10
Score:0.55
Offset:3
Orientation:reverse strand
Alignment:GGCTCTGCMAAAG
---GCTGTCAA--
 C T A G A C T G A G T C A C G T A T G C A C G T A C T G A T G C T G A C C G T A C T G A G C T A A C T G
A C G T A C G T A C G T A T C G A T G C A C G T C A T G G C A T A G T C G T C A G C T A A C G T A C G T