Homer de novo Motif Results (hs_MammaryGland_MCF7_Cancer_AHR_SRX2378690_homermotifs_10_13_16/)

Known Motif Enrichment Results
Gene Ontology Enrichment Results
If Homer is having trouble matching a motif to a known motif, try copy/pasting the matrix file into STAMP
More information on motif finding results: HOMER | Description of Results | Tips
Total target sequences = 661
Total background sequences = 48220
* - possible false positive
RankMotifP-valuelog P-pvalue% of Targets% of Background STD(Bg STD) Best Match/DetailsMotif File
1 T C G A C T A G A C T G A C G T A G T C C G T A A T C G A C T G T A C G C G A T A T C G C T G A G T A C 1e-20-4.764e+012.57%0.07%25.7bp (25.0bp)ERE(NR),IR3/MCF7-ERa-ChIP-Seq(Unpublished)/Homer(0.908)
More Information | Similar Motifs Found
motif file (matrix)
2 A C G T C T A G A G C T A C G T A C G T C T G A A G T C G C T A A G C T C G T A 1e-18-4.177e+0110.29%2.91%26.7bp (29.1bp)FOXA1(Forkhead)/LNCAP-FOXA1-ChIP-Seq(GSE27824)/Homer(0.938)
More Information | Similar Motifs Found
motif file (matrix)
3 A G T C A C G T A T G C A G C T T G C A A C G T A C T G A C G T C T G A C G A T T A C G G T A C T C A G A C G T A T C G G T A C 1e-16-3.861e+011.06%0.00%16.7bp (16.9bp)PB0170.1_Sox17_2/Jaspar(0.595)
More Information | Similar Motifs Found
motif file (matrix)
4 A C T G C T G A A T C G A G C T A G T C G T C A A C G T A C G T G T A C A G C T G A C T A G C T C G T A 1e-14-3.377e+011.06%0.01%25.2bp (33.5bp)JUN(var.2)/MA0489.1/Jaspar(0.683)
More Information | Similar Motifs Found
motif file (matrix)
5 A G C T C G A T G T A C C G A T A C G T A T G C A C G T A G T C A G T C A G T C C G T A G C T A A C T G A T G C A G T C C G T A 1e-14-3.377e+011.06%0.01%25.8bp (13.4bp)Rbpj1(?)/Panc1-Rbpj1-ChIP-Seq(GSE47459)/Homer(0.566)
More Information | Similar Motifs Found
motif file (matrix)
6 A G C T A C T G T G C A C T G A C T A G G T A C A G T C A C G T C T A G C G T A C T A G T A C G C T A G 1e-12-2.840e+012.12%0.13%27.4bp (26.6bp)AP-2gamma(AP2)/MCF7-TFAP2C-ChIP-Seq(GSE21234)/Homer(0.678)
More Information | Similar Motifs Found
motif file (matrix)
7 A T C G A C G T C T A G C T A G C G T A C G T A A C T G T C A G C G T A A T G C C G T A A C T G A C T G A C T G A G T C A G T C 1e-12-2.821e+010.91%0.00%13.1bp (13.8bp)RARg(NR)/ES-RARg-ChIP-Seq(GSE30538)/Homer(0.616)
More Information | Similar Motifs Found
motif file (matrix)
8 * T C G A A G T C A C T G C G T A A T C G G C A T A C G T C G A T C G A T A C T G A T C G C T G A A C T G C T G A C G A T G C A T 1e-11-2.739e+011.06%0.01%20.6bp (20.2bp)GATA3(Zf),DR4/iTreg-Gata3-ChIP-Seq(GSE20898)/Homer(0.627)
More Information | Similar Motifs Found
motif file (matrix)
9 * C G T A C G T A A G T C C G T A A C T G C G T A A C T G A C G T A C T G A T C G A C G T A C G T G A T C 1e-11-2.627e+010.76%0.00%19.9bp (3.1bp)Bapx1(Homeobox)/VertebralCol-Bapx1-ChIP-Seq(GSE36672)/Homer(0.641)
More Information | Similar Motifs Found
motif file (matrix)
10 * A C G T C G T A A C T G A G T C A G T C A G T C A C G T A G T C A C G T T C G A A C T G A C G T A C G T 1e-11-2.627e+010.76%0.00%22.1bp (0.0bp)CTCF(Zf)/CD4+-CTCF-ChIP-Seq(Barski_et_al.)/Homer(0.599)
More Information | Similar Motifs Found
motif file (matrix)
11 * G C A T C T G A A C G T A C T G G T A C A G T C G T C A C G T A C T G A A C G T A C T G A C G T G T A C C G T A A C G T A G T C 1e-11-2.627e+010.76%0.00%13.1bp (0.0bp)NR1H2::RXRA/MA0115.1/Jaspar(0.683)
More Information | Similar Motifs Found
motif file (matrix)
12 * C G T A A C T G A G T C A C G T A T G C C G T A C T A G A C G T A G T C C T G A A C G T G C A T G T C A G T A C G T C A C G T A 1e-11-2.627e+010.76%0.00%25.5bp (0.0bp)Nrf2(bZIP)/Lymphoblast-Nrf2-ChIP-Seq(GSE37589)/Homer(0.656)
More Information | Similar Motifs Found
motif file (matrix)
13 * A G C T A G C T C G T A A G T C A G T C C G A T A T C G A C T G A G C T A G T C C G T A A C G T G T A C A C G T A T G C G A C T 1e-11-2.627e+010.76%0.00%22.6bp (0.0bp)GATA3(Zf),DR4/iTreg-Gata3-ChIP-Seq(GSE20898)/Homer(0.766)
More Information | Similar Motifs Found
motif file (matrix)
14 * G T C A A T G C G T C A A G T C C T G A A C T G C T A G A T C G A G T C G T A C C G A T A C T G C G A T 1e-11-2.581e+011.66%0.07%15.8bp (28.3bp)ZNF322(Zf)/HEK293-ZNF322.GFP-ChIP-Seq(GSE58341)/Homer(0.633)
More Information | Similar Motifs Found
motif file (matrix)
15 * A T C G A C G T A C T G C T G A A G T C C G A T A G C T A T G C G T C A A G T C G T C A T A G C C T G A A C T G A C G T A C T G 1e-11-2.579e+010.91%0.01%21.3bp (16.2bp)CRE(bZIP)/Promoter/Homer(0.614)
More Information | Similar Motifs Found
motif file (matrix)
16 * C A G T A C T G A C T G C G T A C G T A C G T A A G C T G T A C A C G T G T C A A C T G A C T G C A G T C A T G A C T G A C G T 1e-11-2.579e+010.91%0.01%18.5bp (12.5bp)NFATC1/MA0624.1/Jaspar(0.631)
More Information | Similar Motifs Found
motif file (matrix)
17 * G T A C A G C T G A T C C G T A A T G C G A C T A G T C C G T A T A C G A C G T A G T C G T C A A C G T A G T C A G T C A G T C 1e-11-2.569e+012.42%0.23%21.8bp (26.9bp)Pknox1(Homeobox)/ES-Prep1-ChIP-Seq(GSE63282)/Homer(0.635)
More Information | Similar Motifs Found
motif file (matrix)
18 * G T C A G A T C G T A C A G T C C G T A A C T G A G T C C G A T C T A G C T A G C G T A A T G C C G T A 1e-10-2.433e+012.27%0.21%30.9bp (29.4bp)PB0205.1_Zic1_2/Jaspar(0.688)
More Information | Similar Motifs Found
motif file (matrix)
19 * T C A G C G A T A C G T G C A T T C G A T C A G C T G A C A G T T A G C C G T A 1e-10-2.391e+013.18%0.49%23.1bp (32.2bp)PH0014.1_Cphx/Jaspar(0.646)
More Information | Similar Motifs Found
motif file (matrix)
20 * A C G T G T A C C G A T C T A G C A T G A C T G A T C G A C T G A G C T C A T G G A C T G C T A G C T A G A T C A G C T C G A T 1e-9-2.282e+010.76%0.00%5.3bp (11.4bp)PB0201.1_Zfp281_2/Jaspar(0.614)
More Information | Similar Motifs Found
motif file (matrix)
21 * C A T G G T C A C T A G C T A G C A T G T G A C G C T A A C G T T C A G C G A T T A G C T G C A A T G C C G A T A C T G G C A T 1e-9-2.241e+014.84%1.25%24.0bp (29.3bp)PH0141.1_Pknox2/Jaspar(0.595)
More Information | Similar Motifs Found
motif file (matrix)
22 * A T G C A C T G A C T G A C G T C G T A C G T A A C T G G A C T A C T G A G T C 1e-9-2.125e+011.21%0.04%27.1bp (26.4bp)ISL2/MA0914.1/Jaspar(0.718)
More Information | Similar Motifs Found
motif file (matrix)
23 * A C G T A C T G A G T C C G T A A G T C C T A G A C T G C G T A G A C T A T G C A C G T A T G C C G T A 1e-9-2.080e+010.76%0.01%35.2bp (7.1bp)PB0026.1_Gm397_1/Jaspar(0.585)
More Information | Similar Motifs Found
motif file (matrix)
24 * A T G C G A T C T A G C A G T C A T G C A G T C T A C G T A G C G T A C A T G C T G A C A T G C C G T A A T G C A T C G A T G C 1e-8-2.064e+012.72%0.42%21.8bp (23.5bp)EGR1/MA0162.2/Jaspar(0.793)
More Information | Similar Motifs Found
motif file (matrix)
25 * A T C G T G C A A G T C A G C T A G C T C T G A A C T G G T A C C G T A C T A G A T C G T C G A C G T A 1e-8-2.054e+013.33%0.66%22.1bp (28.4bp)Unknown-ESC-element(?)/mES-Nanog-ChIP-Seq(GSE11724)/Homer(0.694)
More Information | Similar Motifs Found
motif file (matrix)
26 * C T G A A T G C C T A G A C T G A C T G C T G A A C T G C G T A A C T G C G T A A G C T G A T C C G T A 1e-8-2.036e+010.61%0.00%26.3bp (9.0bp)Gata4/MA0482.1/Jaspar(0.617)
More Information | Similar Motifs Found
motif file (matrix)
27 * A G T C A C G T A T G C A C G T A T C G A G T C A C T G A C T G C G T A A C G T A C T G A C T G C G T A 1e-8-2.036e+010.61%0.00%20.8bp (0.0bp)ETV5/MA0765.1/Jaspar(0.563)
More Information | Similar Motifs Found
motif file (matrix)
28 * A G T C A G C T A T C G T A C G C G T A C T A G C A T G A T C G A G T C C G A T A C G T A G T C G A C T A C G T C A G T A G T C 1e-8-2.036e+010.61%0.00%17.1bp (29.1bp)EWSR1-FLI1/MA0149.1/Jaspar(0.566)
More Information | Similar Motifs Found
motif file (matrix)
29 * A C T G A C G T A G T C C G T A A G C T A T C G A G T C C G T A A T C G A C T G G T C A A G T C A C G T A C T G A G C T A T C G 1e-8-2.036e+010.61%0.00%21.7bp (0.0bp)PAX5(Paired,Homeobox)/GM12878-PAX5-ChIP-Seq(GSE32465)/Homer(0.661)
More Information | Similar Motifs Found
motif file (matrix)
30 * A G T C G C T A A G T C A T C G A G T C C G T A T G A C C A T G A G T C C T G A 1e-7-1.809e+011.66%0.16%27.1bp (33.2bp)Arnt:Ahr(bHLH)/MCF7-Arnt-ChIP-Seq(Lo_et_al.)/Homer(0.794)
More Information | Similar Motifs Found
motif file (matrix)
31 * C T A G A C T G C G A T A C T G A G C T A C G T A C G T C G A T C G T A G T A C C T A G A C T G G A C T 1e-7-1.800e+011.82%0.20%25.8bp (32.0bp)CDX4(Homeobox)/ZebrafishEmbryos-Cdx4.Myc-ChIP-Seq(GSE48254)/Homer(0.673)
More Information | Similar Motifs Found
motif file (matrix)
32 * A C G T A C G T C G T A C G T A A G T C A C T G A C G T A C T G G T C A A G T C 1e-7-1.760e+010.61%0.00%17.2bp (18.0bp)E-box(bHLH)/Promoter/Homer(0.730)
More Information | Similar Motifs Found
motif file (matrix)
33 * A G C T T G C A C A G T C G T A A C T G G A C T A C G T A G T C C G A T A G T C G T A C G T A C C T A G 1e-7-1.711e+010.91%0.03%26.9bp (20.0bp)Znf263(Zf)/K562-Znf263-ChIP-Seq(GSE31477)/Homer(0.693)
More Information | Similar Motifs Found
motif file (matrix)
34 * A T C G C G T A C T G A A C T G C G T A C G T A G A T C C A G T A T G C T A C G A T G C G C T A G T A C 1e-7-1.700e+011.51%0.14%27.9bp (25.7bp)PU.1(ETS)/ThioMac-PU.1-ChIP-Seq(GSE21512)/Homer(0.573)
More Information | Similar Motifs Found
motif file (matrix)
35 * A C T G C T G A A C T G C T G A A C G T G T C A G T C A A G T C C G T A C G T A 1e-7-1.674e+011.21%0.08%29.1bp (32.8bp)GATA3(Zf)/iTreg-Gata3-ChIP-Seq(GSE20898)/Homer(0.740)
More Information | Similar Motifs Found
motif file (matrix)
36 * T C A G A C G T C A T G T G A C A G C T A T G C A G C T A G C T A C G T T A C G G A C T T A G C G T A C 1e-7-1.666e+012.42%0.43%23.5bp (28.9bp)Pparg::Rxra/MA0065.2/Jaspar(0.710)
More Information | Similar Motifs Found
motif file (matrix)
37 * T A G C A G T C G A T C A G T C G A T C G A T C T A C G T A C G A T C G T C A G 1e-6-1.603e+016.81%2.83%23.7bp (25.1bp)PB0103.1_Zic3_1/Jaspar(0.907)
More Information | Similar Motifs Found
motif file (matrix)
38 * A G T C A C T G A C G T A T G C A C G T A T G C C G T A A G T C A C G T A G T C 1e-6-1.599e+010.61%0.01%36.6bp (31.4bp)Pbx3(Homeobox)/GM12878-PBX3-ChIP-Seq(GSE32465)/Homer(0.642)
More Information | Similar Motifs Found
motif file (matrix)
39 * C T A G C T G A A C T G A C G T A C T G A C T G C G T A A C G T A G T C A C G T G T C A A C T G A G C T 1e-6-1.468e+010.45%0.00%21.7bp (0.0bp)ZNF354C/MA0130.1/Jaspar(0.656)
More Information | Similar Motifs Found
motif file (matrix)
40 * T A G C C G T A C T A G C T G A A C G T A C T G C T A G T G C A A T C G A G T C A C G T A C T G C A T G 1e-6-1.462e+012.87%0.71%25.2bp (26.6bp)NeuroD1(bHLH)/Islet-NeuroD1-ChIP-Seq(GSE30298)/Homer(0.651)
More Information | Similar Motifs Found
motif file (matrix)
41 * A C T G C G T A A C G T A G T C C G T A A G T C C G T A C G T A A G T C C G T A A C T G A C T G C G T A A C T G C G T A A C T G 1e-1-4.298e+000.15%0.00%25.5bp (0.0bp)PB0207.1_Zic3_2/Jaspar(0.638)
More Information | Similar Motifs Found
motif file (matrix)
42 * A G C T A G C T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T G A C T G A C T 1e-1-3.876e+000.30%0.03%32.5bp (18.5bp)PB0182.1_Srf_2/Jaspar(0.789)
More Information | Similar Motifs Found
motif file (matrix)