Information for 4-TGNAGCCTGAGGR (Motif 6)

A G C T A C T G T G C A C T G A C T A G G T A C A G T C A C G T C T A G C G T A C T A G T A C G C T A G
Reverse Opposite:
A G T C A G T C A G T C C G A T A G T C C G T A A C T G A C T G A G T C A G C T A C G T G T A C C T G A
p-value:1e-12
log p-value:-2.840e+01
Information Content per bp:1.771
Number of Target Sequences with motif14.0
Percentage of Target Sequences with motif2.12%
Number of Background Sequences with motif62.0
Percentage of Background Sequences with motif0.13%
Average Position of motif in Targets45.7 +/- 27.4bp
Average Position of motif in Background47.5 +/- 26.6bp
Strand Bias (log2 ratio + to - strand density)-1.0
Multiplicity (# of sites on avg that occur together)1.07
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

AP-2gamma(AP2)/MCF7-TFAP2C-ChIP-Seq(GSE21234)/Homer

Match Rank:1
Score:0.68
Offset:4
Orientation:forward strand
Alignment:TGNAGCCTGAGGR---
----SCCTSAGGSCAW
 A G C T A C T G T G C A C T G A C T A G G T A C A G T C A C G T C T A G C G T A C T A G T A C G C T A G A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A T C G A G T C A G T C G A C T A T G C C T G A C T A G A C T G T A C G G T A C C T G A C G A T

AP-2alpha(AP2)/Hela-AP2alpha-ChIP-Seq(GSE31477)/Homer

Match Rank:2
Score:0.68
Offset:4
Orientation:reverse strand
Alignment:TGNAGCCTGAGGR---
----GCCTCAGGGCAT
 A G C T A C T G T G C A C T G A C T A G G T A C A G T C A C G T C T A G C G T A C T A G T A C G C T A G A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A T C G A G T C A G T C A G C T A T G C C T G A C T A G A C T G A T C G G T A C G C T A C G A T

TFAP2B(var.2)/MA0812.1/Jaspar

Match Rank:3
Score:0.66
Offset:3
Orientation:reverse strand
Alignment:TGNAGCCTGAGGR-
---TGCCTGAGGCN
 A G C T A C T G T G C A C T G A C T A G G T A C A G T C A C G T C T A G C G T A C T A G T A C G C T A G A C G T
A C G T A C G T A C G T G C A T A T C G A T G C A G T C A C G T A T C G T C G A T C A G A T C G A T G C C A G T

TFAP2A/MA0003.3/Jaspar

Match Rank:4
Score:0.66
Offset:3
Orientation:reverse strand
Alignment:TGNAGCCTGAGGR-
---NGCCTGAGGCN
 A G C T A C T G T G C A C T G A C T A G G T A C A G T C A C G T C T A G C G T A C T A G T A C G C T A G A C G T
A C G T A C G T A C G T G C A T A T C G A T G C A G T C A C G T A T C G T C G A T C A G A T C G A T G C C A T G

TFAP2C(var.2)/MA0814.1/Jaspar

Match Rank:5
Score:0.66
Offset:3
Orientation:forward strand
Alignment:TGNAGCCTGAGGR-
---AGCCTCAGGCA
 A G C T A C T G T G C A C T G A C T A G G T A C A G T C A C G T C T A G C G T A C T A G T A C G C T A G A C G T
A C G T A C G T A C G T G T C A T A C G A T G C A G T C A G C T T A G C T C G A T C A G A T C G T A G C C G T A

PB0088.1_Tcfap2e_1/Jaspar

Match Rank:6
Score:0.65
Offset:1
Orientation:forward strand
Alignment:TGNAGCCTGAGGR---
-ATTGCCTGAGGCAAT
 A G C T A C T G T G C A C T G A C T A G G T A C A G T C A C G T C T A G C G T A C T A G T A C G C T A G A C G T A C G T A C G T
A C G T G C T A G C A T G C A T A T C G A G T C A G T C A G C T A T C G T C G A T C A G A C T G T A G C C T A G G C T A C G A T

PB0189.1_Tcfap2a_2/Jaspar

Match Rank:7
Score:0.61
Offset:2
Orientation:forward strand
Alignment:TGNAGCCTGAGGR---
--TCACCTCTGGGCAG
 A G C T A C T G T G C A C T G A C T A G G T A C A G T C A C G T C T A G C G T A C T A G T A C G C T A G A C G T A C G T A C G T
A C G T A C G T G A C T G T A C C T G A A G T C G A T C A G C T A T G C G C A T C T A G C T A G C A T G A G T C C G T A A C T G

PB0087.1_Tcfap2c_1/Jaspar

Match Rank:8
Score:0.60
Offset:1
Orientation:forward strand
Alignment:TGNAGCCTGAGGR---
-ATTGCCTGAGGCGAA
 A G C T A C T G T G C A C T G A C T A G G T A C A G T C A C G T C T A G C G T A C T A G T A C G C T A G A C G T A C G T A C G T
A C G T C G T A G C A T G A C T A T C G G T A C A G T C A G C T A T C G T C G A C T A G A C T G T A G C C T A G G C T A C G T A

PB0085.1_Tcfap2a_1/Jaspar

Match Rank:9
Score:0.58
Offset:1
Orientation:forward strand
Alignment:TGNAGCCTGAGGR---
-ATTCCCTGAGGGGAA
 A G C T A C T G T G C A C T G A C T A G G T A C A G T C A C G T C T A G C G T A C T A G T A C G C T A G A C G T A C G T A C G T
A C G T C G T A C G A T G A C T A T G C G T A C A G T C A G C T A T C G T C G A C T A G A C T G T A C G C T A G C G T A C T G A

Six1(Homeobox)/Myoblast-Six1-ChIP-Chip(GSE20150)/Homer

Match Rank:10
Score:0.57
Offset:1
Orientation:reverse strand
Alignment:TGNAGCCTGAGGR
-GWAAYHTGABMC
 A G C T A C T G T G C A C T G A C T A G G T A C A G T C A C G T C T A G C G T A C T A G T A C G C T A G
A C G T A C T G C G A T G T C A C G T A A G T C G T A C G C A T A C T G C G T A A C G T G T A C G A T C