Information for 1-TGTTTACATA (Motif 2)

A C G T C T A G A G C T A C G T A C G T C T G A A G T C G C T A A G C T C G T A
Reverse Opposite:
C G A T T C G A C G A T C T A G A G C T C G T A C G T A C T G A A G T C C G T A
p-value:1e-18
log p-value:-4.177e+01
Information Content per bp:1.741
Number of Target Sequences with motif68.0
Percentage of Target Sequences with motif10.29%
Number of Background Sequences with motif1403.2
Percentage of Background Sequences with motif2.91%
Average Position of motif in Targets50.6 +/- 26.7bp
Average Position of motif in Background51.0 +/- 29.1bp
Strand Bias (log2 ratio + to - strand density)0.4
Multiplicity (# of sites on avg that occur together)1.06
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

FOXA1(Forkhead)/LNCAP-FOXA1-ChIP-Seq(GSE27824)/Homer

Match Rank:1
Score:0.94
Offset:0
Orientation:reverse strand
Alignment:TGTTTACATA
TGTTTACTTT
 A C G T C T A G A G C T A C G T A C G T C T G A A G T C G C T A A G C T C G T A
A C G T C T A G A C G T A C G T A C G T C T G A A G T C G C A T A G C T C G A T

FOXA1(Forkhead)/MCF7-FOXA1-ChIP-Seq(GSE26831)/Homer

Match Rank:2
Score:0.94
Offset:0
Orientation:reverse strand
Alignment:TGTTTACATA
TGTTTACTTT
 A C G T C T A G A G C T A C G T A C G T C T G A A G T C G C T A A G C T C G T A
A C G T C T A G A C G T A C G T A C G T C T G A A G T C G C A T A G C T C G A T

FOXA1/MA0148.3/Jaspar

Match Rank:3
Score:0.92
Offset:-4
Orientation:forward strand
Alignment:----TGTTTACATA-
TCCATGTTTACTTTG
 A C G T A C G T A C G T A C G T A C G T C T A G A G C T A C G T A C G T C T G A A G T C G C T A A G C T C G T A A C G T
G A C T A G T C A T G C G C T A C G A T C T A G A C G T A C G T A C G T C T G A A G T C G C A T A G C T C G A T C A T G

FOXC2/MA0846.1/Jaspar

Match Rank:4
Score:0.92
Offset:-2
Orientation:reverse strand
Alignment:--TGTTTACATA
TTTGTTTACTTA
 A C G T A C G T A C G T C T A G A G C T A C G T A C G T C T G A A G T C G C T A A G C T C G T A
C G A T C G A T G A C T T C A G G A C T C A G T C A G T C T G A A G T C C G A T G A C T C G T A

FOXM1(Forkhead)/MCF7-FOXM1-ChIP-Seq(GSE72977)/Homer

Match Rank:5
Score:0.92
Offset:0
Orientation:forward strand
Alignment:TGTTTACATA
TRTTTACTTW
 A C G T C T A G A G C T A C G T A C G T C T G A A G T C G C T A A G C T C G T A
A C G T C T A G A G C T A C G T A C G T C T G A A G T C G A C T A G C T C G T A

Foxf1(Forkhead)/Lung-Foxf1-ChIP-Seq(GSE77951)/Homer

Match Rank:6
Score:0.92
Offset:-1
Orientation:reverse strand
Alignment:-TGTTTACATA-
NTGTTTAYATWW
 A C G T A C G T C T A G A G C T A C G T A C G T C T G A A G T C G C T A A G C T C G T A A C G T
C A G T A C G T C T A G A C G T A C G T A C G T C G T A A G C T T G C A G A C T C G T A C G T A

FoxL2(Forkhead)/Ovary-FoxL2-ChIP-Seq(GSE60858)/Homer

Match Rank:7
Score:0.91
Offset:-2
Orientation:reverse strand
Alignment:--TGTTTACATA
CBTGTTTAYAWW
 A C G T A C G T A C G T C T A G A G C T A C G T A C G T C T G A A G T C G C T A A G C T C G T A
A T G C A C G T A C G T C T A G A C G T A C G T A C G T C G T A A G T C G C T A C G A T G C A T

Foxa2/MA0047.2/Jaspar

Match Rank:8
Score:0.91
Offset:0
Orientation:forward strand
Alignment:TGTTTACATA--
TGTTTACTTAGG
 A C G T C T A G A G C T A C G T A C G T C T G A A G T C G C T A A G C T C G T A A C G T A C G T
A C G T C T A G A C G T A C G T A C G T T C G A A G T C G C A T A G C T C G T A C A T G A T C G

FOXC1/MA0032.2/Jaspar

Match Rank:9
Score:0.91
Offset:-1
Orientation:reverse strand
Alignment:-TGTTTACATA
ATATTTACATA
 A C G T A C G T C T A G A G C T A C G T A C G T C T G A A G T C G C T A A G C T C G T A
C G T A G A C T T C G A G A C T C A G T C A G T C G T A A G T C G C T A G A C T C G T A

MF0005.1_Forkhead_class/Jaspar

Match Rank:10
Score:0.91
Offset:0
Orientation:forward strand
Alignment:TGTTTACATA
TGTTTATTT-
 A C G T C T A G A G C T A C G T A C G T C T G A A G T C G C T A A G C T C G T A
G C A T C T A G A G C T G A C T C A G T C T G A A G C T C A G T A G C T A C G T