Information for 7-CGGTAAGTGC (Motif 22)

A T G C A C T G A C T G A C G T C G T A C G T A A C T G G A C T A C T G A G T C
Reverse Opposite:
A C T G A G T C C G T A T G A C A C G T G C A T C G T A A G T C G T A C A T C G
p-value:1e-9
log p-value:-2.125e+01
Information Content per bp:1.858
Number of Target Sequences with motif8.0
Percentage of Target Sequences with motif1.21%
Number of Background Sequences with motif20.6
Percentage of Background Sequences with motif0.04%
Average Position of motif in Targets54.2 +/- 27.1bp
Average Position of motif in Background52.7 +/- 26.4bp
Strand Bias (log2 ratio + to - strand density)2.8
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

ISL2/MA0914.1/Jaspar

Match Rank:1
Score:0.72
Offset:2
Orientation:reverse strand
Alignment:CGGTAAGTGC
--TTAAGTGC
 A T G C A C T G A C T G A C G T C G T A C G T A A C T G G A C T A C T G A G T C
A C G T A C G T G A C T C G A T C T G A G C T A C A T G C G A T C T A G A T G C

SD0001.1_at_AC_acceptor/Jaspar

Match Rank:2
Score:0.72
Offset:-1
Orientation:forward strand
Alignment:-CGGTAAGTGC
CAGGTAAGTAT
 A C G T A T G C A C T G A C T G A C G T C G T A C G T A A C T G G A C T A C T G A G T C
T G A C C G T A C T A G A C T G A C G T C T G A C G T A C T A G C G A T C T G A G A C T

Nkx3.1(Homeobox)/LNCaP-Nkx3.1-ChIP-Seq(GSE28264)/Homer

Match Rank:3
Score:0.69
Offset:2
Orientation:reverse strand
Alignment:CGGTAAGTGC--
--TTAAGTGCTT
 A T G C A C T G A C T G A C G T C G T A C G T A A C T G G A C T A C T G A G T C A C G T A C G T
A C G T A C G T A C G T C A G T T C G A C G T A A C T G A C G T C T A G A T G C A G C T A G C T

NKX3-2/MA0122.2/Jaspar

Match Rank:4
Score:0.68
Offset:2
Orientation:reverse strand
Alignment:CGGTAAGTGC-
--TTAAGTGGN
 A T G C A C T G A C T G A C G T C G T A C G T A A C T G G A C T A C T G A G T C A C G T
A C G T A C G T G A C T C G A T C T G A T C G A C A T G C G A T C T A G A T C G A G C T

Nkx3-1/MA0124.2/Jaspar

Match Rank:5
Score:0.66
Offset:2
Orientation:reverse strand
Alignment:CGGTAAGTGC-
--TTAAGTGGT
 A T G C A C T G A C T G A C G T C G T A C G T A A C T G G A C T A C T G A G T C A C G T
A C G T A C G T G A C T C G A T C T G A C T G A A C T G C G A T T C A G A T C G A G C T

ZNF264(Zf)/HEK293-ZNF264.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:6
Score:0.66
Offset:1
Orientation:reverse strand
Alignment:CGGTAAGTGC---
-RGTTAGTGCCCY
 A T G C A C T G A C T G A C G T C G T A C G T A A C T G G A C T A C T G A G T C A C G T A C G T A C G T
A C G T C T G A C T A G A C G T G A C T G T C A A C T G A G C T A C T G A T G C G T A C G T A C A G C T

Barhl1/MA0877.1/Jaspar

Match Rank:7
Score:0.65
Offset:1
Orientation:forward strand
Alignment:CGGTAAGTGC-
-GCTAATTGCT
 A T G C A C T G A C T G A C G T C G T A C G T A A C T G G A C T A C T G A G T C A C G T
A C G T A T C G G A T C G C A T C G T A C T G A C G A T A G C T C T A G A T G C A G C T

Isl1(Homeobox)/Neuron-Isl1-ChIP-Seq(GSE31456)/Homer

Match Rank:8
Score:0.62
Offset:2
Orientation:forward strand
Alignment:CGGTAAGTGC
--CTAATKGV
 A T G C A C T G A C T G A C G T C G T A C G T A A C T G G A C T A C T G A G T C
A C G T A C G T A G T C C G A T C T G A C G T A A C G T C A G T T C A G T G A C

PH0004.1_Nkx3-2/Jaspar

Match Rank:9
Score:0.62
Offset:-2
Orientation:reverse strand
Alignment:--CGGTAAGTGC-----
NTNNTTAAGTGGTTANN
 A C G T A C G T A T G C A C T G A C T G A C G T C G T A C G T A A C T G G A C T A C T G A G T C A C G T A C G T A C G T A C G T A C G T
C T A G C A G T A C G T A T C G G C A T C G A T C T G A C T G A A C T G C G A T C T A G A T C G C G A T A G C T C G T A C G A T A C T G

Spz1/MA0111.1/Jaspar

Match Rank:10
Score:0.61
Offset:-1
Orientation:forward strand
Alignment:-CGGTAAGTGC
AGGGTAACAGC
 A C G T A T G C A C T G A C T G A C G T C G T A C G T A A C T G G A C T A C T G A G T C
C T G A A T C G C T A G A C T G C A G T C G T A C G T A T A G C C T G A A C T G T A G C