Homer de novo Motif Results (hs_HepatocellularCarcin_HepG2_Cancer_HES1_SRX2733501_homermotifs_10_13_16/)

Known Motif Enrichment Results
Gene Ontology Enrichment Results
If Homer is having trouble matching a motif to a known motif, try copy/pasting the matrix file into STAMP
More information on motif finding results: HOMER | Description of Results | Tips
Total target sequences = 861
Total background sequences = 46995
* - possible false positive
RankMotifP-valuelog P-pvalue% of Targets% of Background STD(Bg STD) Best Match/DetailsMotif File
1 C G A T C T A G C G A T A C G T C A G T C T G A G A T C G C A T A G T C C G T A A C T G A T C G T A C G 1e-107-2.478e+0229.85%5.76%25.7bp (32.3bp)FOXA1(Forkhead)/LNCAP-FOXA1-ChIP-Seq(GSE27824)/Homer(0.943)
More Information | Similar Motifs Found
motif file (matrix)
2 A G C T C A G T A T C G T C G A G A T C A T G C G A C T A G C T G C A T T C A G 1e-31-7.343e+0130.89%14.87%25.8bp (30.2bp)Erra(NR)/HepG2-Erra-ChIP-Seq(GSE31477)/Homer(0.902)
More Information | Similar Motifs Found
motif file (matrix)
3 A G T C A T G C A C G T A C G T A C G T A T C G C G T A C G A T A T C G G C A T 1e-28-6.527e+019.76%2.21%23.1bp (31.9bp)Tcf4(HMG)/Hct116-Tcf4-ChIP-Seq(SRA012054)/Homer(0.949)
More Information | Similar Motifs Found
motif file (matrix)
4 C A T G C T G A C G A T C G A T T C A G A C G T C A T G G A C T G C T A T G C A 1e-21-5.004e+015.69%0.96%24.6bp (30.0bp)HLF(bZIP)/HSC-HLF.Flag-ChIP-Seq(GSE69817)/Homer(0.825)
More Information | Similar Motifs Found
motif file (matrix)
5 C T G A A T C G C G A T A G C T C G T A G T C A G C A T T A C G C G T A C A G T C G A T C G T A T G C A 1e-19-4.416e+012.56%0.15%22.3bp (27.6bp)HNF1b(Homeobox)/PDAC-HNF1B-ChIP-Seq(GSE64557)/Homer(0.877)
More Information | Similar Motifs Found
motif file (matrix)
6 A T C G G T A C C T A G A G T C A T C G G A C T A C T G A T G C A T G C C A G T 1e-14-3.419e+013.25%0.45%22.4bp (36.4bp)Tcfl5/MA0632.1/Jaspar(0.868)
More Information | Similar Motifs Found
motif file (matrix)
7 A T G C G T C A T A C G G T C A T A G C C T G A A T C G A G T C A G T C A G C T A G T C C G A T A T C G G C A T C A G T A C T G 1e-14-3.232e+011.74%0.09%23.4bp (25.1bp)Smad4(MAD)/ESC-SMAD4-ChIP-Seq(GSE29422)/Homer(0.617)
More Information | Similar Motifs Found
motif file (matrix)
8 A G T C T G C A A T C G A G T C C G A T A T G C A T G C G A C T A T C G A T C G A G T C A C G T A G T C A G C T A T C G A T C G 1e-13-3.217e+011.86%0.11%27.5bp (28.7bp)PB0003.1_Ascl2_1/Jaspar(0.557)
More Information | Similar Motifs Found
motif file (matrix)
9 A T C G A C T G A C T G C T A G A C T G C G T A C T A G A C T G C T A G C T G A C T A G C G A T A T C G C G T A A C T G A C G T 1e-13-3.144e+011.05%0.02%26.9bp (22.7bp)Zfp281(Zf)/ES-Zfp281-ChIP-Seq(GSE81042)/Homer(0.657)
More Information | Similar Motifs Found
motif file (matrix)
10 A T C G G A T C A G T C A G T C A G C T A C G T C T G A A C G T A T G C A C G T A G T C C G T A A T G C 1e-12-2.971e+011.16%0.03%17.9bp (30.4bp)Gata1(Zf)/K562-GATA1-ChIP-Seq(GSE18829)/Homer(0.692)
More Information | Similar Motifs Found
motif file (matrix)
11 C G T A A T G C T G C A T G A C C T A G G A T C T G C A A C G T C A G T A T G C G A T C A G T C A T G C 1e-12-2.874e+016.39%2.04%26.5bp (28.8bp)GCM1/MA0646.1/Jaspar(0.569)
More Information | Similar Motifs Found
motif file (matrix)
12 * C G A T A C T G A T C G A T C G G T C A C T A G T C A G C T A G C T A G G T A C C T A G A C T G T C A G 1e-11-2.559e+016.04%2.02%25.4bp (24.7bp)KLF5/MA0599.1/Jaspar(0.853)
More Information | Similar Motifs Found
motif file (matrix)
13 * C G T A A C T G C G T A A C T G C G T A A C T G C G T A A C T G C G T A A C T G A G C T C T G A A C T G 1e-10-2.481e+010.58%0.00%19.6bp (0.0bp)PRDM1(Zf)/Hela-PRDM1-ChIP-Seq(GSE31477)/Homer(0.665)
More Information | Similar Motifs Found
motif file (matrix)
14 * A G C T A G T C C G T A A C T G A C T G C G T A A G T C C T G A C G T A G T A C A C T G A T G C A G T C A G T C C G T A A G T C 1e-10-2.481e+010.58%0.00%18.7bp (2.6bp)Klf12/MA0742.1/Jaspar(0.629)
More Information | Similar Motifs Found
motif file (matrix)
15 * C G A T G T A C G A T C A G T C C G A T A G T C G T C A C G T A T C A G A G T C C G T A C G T A C G T A 1e-10-2.415e+011.05%0.03%26.5bp (32.0bp)PBX1/MA0070.1/Jaspar(0.656)
More Information | Similar Motifs Found
motif file (matrix)
16 * A T G C A C G T A T G C G C A T A C T G G A C T C G A T G A C T C A G T T A C G C G A T T C G A C G T A A T G C C A G T A G T C 1e-10-2.415e+011.05%0.04%20.5bp (13.9bp)HLF(bZIP)/HSC-HLF.Flag-ChIP-Seq(GSE69817)/Homer(0.532)
More Information | Similar Motifs Found
motif file (matrix)
17 * T C A G C T G A C G T A C G T A A C T G A G T C G T C A A T G C C G T A C G T A A C T G A C T G A C G T 1e-9-2.234e+010.70%0.01%25.0bp (24.7bp)SOX10/MA0442.1/Jaspar(0.596)
More Information | Similar Motifs Found
motif file (matrix)
18 * C G T A A G T C C G T A C G T A C G T A C T G A A C T G G T C A C G T A C T G A G T A C G T C A C A G T 1e-9-2.101e+010.70%0.01%29.6bp (34.1bp)Sox3/MA0514.1/Jaspar(0.651)
More Information | Similar Motifs Found
motif file (matrix)
19 * T A G C A T C G A C G T A C T G A G T C A C G T A C G T G T C A C T A G C T A G 1e-7-1.768e+011.28%0.13%28.7bp (31.6bp)HIF-1b(HLH)/T47D-HIF1b-ChIP-Seq(GSE59937)/Homer(0.648)
More Information | Similar Motifs Found
motif file (matrix)
20 * A C G T A G T C T C G A C T G A C G T A A G C T A T C G A G T C G A C T G A C T 1e-5-1.380e+011.97%0.47%24.7bp (31.0bp)LIN54/MA0619.1/Jaspar(0.656)
More Information | Similar Motifs Found
motif file (matrix)
21 * A C T G A G C T A C T G G T A C A C T G A G C T T G C A A G T C A C T G A G T C 1e-4-1.090e+010.81%0.09%24.9bp (36.4bp)PB0094.1_Zfp128_1/Jaspar(0.710)
More Information | Similar Motifs Found
motif file (matrix)
22 * C T G A T G C A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C T G A C G T A 1e-2-6.670e+001.05%0.30%29.5bp (33.7bp)PB0182.1_Srf_2/Jaspar(0.816)
More Information | Similar Motifs Found
motif file (matrix)