Information for 18-TCAAATGCTT (Motif 20)

A C G T A G T C T C G A C T G A C G T A A G C T A T C G A G T C G A C T G A C T
Reverse Opposite:
C T G A C T G A T C A G A T G C T C G A A C G T A G C T A G C T C T A G T G C A
p-value:1e-5
log p-value:-1.380e+01
Information Content per bp:1.727
Number of Target Sequences with motif17.0
Percentage of Target Sequences with motif1.97%
Number of Background Sequences with motif218.8
Percentage of Background Sequences with motif0.47%
Average Position of motif in Targets56.7 +/- 24.7bp
Average Position of motif in Background47.0 +/- 31.0bp
Strand Bias (log2 ratio + to - strand density)0.3
Multiplicity (# of sites on avg that occur together)1.06
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

LIN54/MA0619.1/Jaspar

Match Rank:1
Score:0.66
Offset:-3
Orientation:reverse strand
Alignment:---TCAAATGCTT
NATTCAAAT----
 A C G T A C G T A C G T A C G T A G T C T C G A C T G A C G T A A G C T A T C G A G T C G A C T G A C T
C T G A C T G A A C G T A C G T A G T C C T G A C G T A C G T A G C A T A C G T A C G T A C G T A C G T

Hmx1/MA0896.1/Jaspar

Match Rank:2
Score:0.63
Offset:-5
Orientation:reverse strand
Alignment:-----TCAAATGCTT--
ANNCATTAATTGCTNGN
 A C G T A C G T A C G T A C G T A C G T A C G T A G T C T C G A C T G A C G T A A G C T A T C G A G T C G A C T G A C T A C G T A C G T
T G C A G C A T A C G T A T G C G C T A G C A T G C A T C T G A C G T A C A G T G A C T C T A G A G T C G A C T A C G T A T C G A C G T

PH0041.1_Hmx1/Jaspar

Match Rank:3
Score:0.63
Offset:-5
Orientation:reverse strand
Alignment:-----TCAAATGCTT--
ANNCATTAATTGCTNGN
 A C G T A C G T A C G T A C G T A C G T A C G T A G T C T C G A C T G A C G T A A G C T A T C G A G T C G A C T G A C T A C G T A C G T
T G C A G C A T A C G T A T G C G C T A G C A T G C A T C T G A C G T A C A G T G A C T C T A G A G T C G A C T A C G T A T C G A C G T

Tcf3(HMG)/mES-Tcf3-ChIP-Seq(GSE11724)/Homer

Match Rank:4
Score:0.62
Offset:-3
Orientation:forward strand
Alignment:---TCAAATGCTT
ACATCAAAGG---
 A C G T A C G T A C G T A C G T A G T C T C G A C T G A C G T A A G C T A T C G A G T C G A C T G A C T
C T G A A T G C G C T A C G A T A T G C C G T A C G T A C G T A C T A G T A C G A C G T A C G T A C G T

Hmx2/MA0897.1/Jaspar

Match Rank:5
Score:0.61
Offset:-5
Orientation:reverse strand
Alignment:-----TCAAATGCTT--
ATTCNTTAATTGCTTGT
 A C G T A C G T A C G T A C G T A C G T A C G T A G T C T C G A C T G A C G T A A G C T A T C G A G T C G A C T G A C T A C G T A C G T
G C T A G A C T A C G T A G T C C G A T G C A T G C A T C T G A C G T A A C G T A G C T C A T G A G T C A G C T A C G T A T C G A G C T

PH0042.1_Hmx2/Jaspar

Match Rank:6
Score:0.61
Offset:-5
Orientation:reverse strand
Alignment:-----TCAAATGCTT--
ATTCNTTAATTGCTTGT
 A C G T A C G T A C G T A C G T A C G T A C G T A G T C T C G A C T G A C G T A A G C T A T C G A G T C G A C T G A C T A C G T A C G T
G C T A G A C T A C G T A G T C C G A T G C A T G C A T C T G A C G T A A C G T A G C T C A T G A G T C A G C T A C G T A T C G A G C T

TCFL2(HMG)/K562-TCF7L2-ChIP-Seq(GSE29196)/Homer

Match Rank:7
Score:0.61
Offset:-3
Orientation:forward strand
Alignment:---TCAAATGCTT
ACWTCAAAGG---
 A C G T A C G T A C G T A C G T A G T C T C G A C T G A C G T A A G C T A T C G A G T C G A C T G A C T
C G T A A T G C C G A T A C G T A G T C C G T A C G T A C G T A C T A G A T C G A C G T A C G T A C G T

Hmx3/MA0898.1/Jaspar

Match Rank:8
Score:0.61
Offset:-5
Orientation:reverse strand
Alignment:-----TCAAATGCTT--
ATTNNTTAATTGCTTGT
 A C G T A C G T A C G T A C G T A C G T A C G T A G T C T C G A C T G A C G T A A G C T A T C G A G T C G A C T G A C T A C G T A C G T
G C T A G C A T A G C T A G T C C G A T G C A T G C A T C T G A C G T A C A G T G A C T C T A G G A T C A G C T A C G T T A C G A C G T

PH0043.1_Hmx3/Jaspar

Match Rank:9
Score:0.61
Offset:-5
Orientation:reverse strand
Alignment:-----TCAAATGCTT--
ATTNNTTAATTGCTTGT
 A C G T A C G T A C G T A C G T A C G T A C G T A G T C T C G A C T G A C G T A A G C T A T C G A G T C G A C T G A C T A C G T A C G T
G C T A G C A T A G C T A G T C C G A T G C A T G C A T C T G A C G T A C A G T G A C T C T A G G A T C A G C T A C G T T A C G A C G T

CHR(?)/Hela-CellCycle-Expression/Homer

Match Rank:10
Score:0.60
Offset:-5
Orientation:forward strand
Alignment:-----TCAAATGCTT
CGGTTTCAAA-----
 A C G T A C G T A C G T A C G T A C G T A C G T A G T C T C G A C T G A C G T A A G C T A T C G A G T C G A C T G A C T
T A G C T C A G C A T G G C A T A G C T C G A T A T G C C G T A C G T A G T C A A C G T A C G T A C G T A C G T A C G T