Information for 10-AGAGAGAGAGTAG (Motif 13)

C G T A A C T G C G T A A C T G C G T A A C T G C G T A A C T G C G T A A C T G A G C T C T G A A C T G
Reverse Opposite:
A G T C A G C T C T G A A G T C A C G T A G T C A C G T A G T C C G A T A G T C A C G T A G T C A C G T
p-value:1e-10
log p-value:-2.481e+01
Information Content per bp:1.924
Number of Target Sequences with motif5.0
Percentage of Target Sequences with motif0.58%
Number of Background Sequences with motif0.3
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets56.0 +/- 19.6bp
Average Position of motif in Background61.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)-2.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PRDM1(Zf)/Hela-PRDM1-ChIP-Seq(GSE31477)/Homer

Match Rank:1
Score:0.67
Offset:-1
Orientation:reverse strand
Alignment:-AGAGAGAGAGTAG
GAAAGTGAAAGT--
 A C G T C G T A A C T G C G T A A C T G C G T A A C T G C G T A A C T G C G T A A C T G A G C T C T G A A C T G
T C A G C G T A T G C A C T G A C T A G C G A T C T A G G C T A T C G A C G T A A C T G A G C T A C G T A C G T

PRDM1/MA0508.1/Jaspar

Match Rank:2
Score:0.65
Offset:-2
Orientation:forward strand
Alignment:--AGAGAGAGAGTAG
AGAAAGTGAAAGTGA
 A C G T A C G T C G T A A C T G C G T A A C T G C G T A A C T G C G T A A C T G C G T A A C T G A G C T C T G A A C T G
C G T A C T A G C T G A T C G A C T G A C T A G C A G T C T A G C G T A C T G A C G T A T C A G A C G T C T A G C T G A

PB0140.1_Irf6_2/Jaspar

Match Rank:3
Score:0.60
Offset:-1
Orientation:reverse strand
Alignment:-AGAGAGAGAGTAG-
NNNACCGAGAGTNNN
 A C G T C G T A A C T G C G T A A C T G C G T A A C T G C G T A A C T G C G T A A C T G A G C T C T G A A C T G A C G T
A T C G G A C T C A T G G T C A A G T C G A T C C T A G T C G A T A C G G T C A C A T G C G A T T C A G T A C G A C G T

PB0139.1_Irf5_2/Jaspar

Match Rank:4
Score:0.58
Offset:-1
Orientation:forward strand
Alignment:-AGAGAGAGAGTAG-
TTGACCGAGAATTCC
 A C G T C G T A A C T G C G T A A C T G C G T A A C T G C G T A A C T G C G T A A C T G A G C T C T G A A C T G A C G T
A G C T G C A T C T A G C G T A G A C T G T A C C T A G C T G A A T C G C G T A C T G A G A C T G A C T A G T C T A G C

IRF1/MA0050.2/Jaspar

Match Rank:5
Score:0.54
Offset:-6
Orientation:reverse strand
Alignment:------AGAGAGAGAGTAG--
AAANNGAAAGTGAAAGTAAAN
 A C G T A C G T A C G T A C G T A C G T A C G T C G T A A C T G C G T A A C T G C G T A A C T G C G T A A C T G C G T A A C T G A G C T C T G A A C T G A C G T A C G T
C T G A C G T A C T G A T C A G G C A T T C A G C T G A C T G A C G T A T A C G G A C T C T A G T C G A C T G A C G T A T A C G G A C T T C G A T C G A C T G A C T G A

IRF1(IRF)/PBMC-IRF1-ChIP-Seq(GSE43036)/Homer

Match Rank:6
Score:0.54
Offset:-1
Orientation:forward strand
Alignment:-AGAGAGAGAGTAG
GAAAGTGAAAGT--
 A C G T C G T A A C T G C G T A A C T G C G T A A C T G C G T A A C T G C G T A A C T G A G C T C T G A A C T G
T C A G C T G A C G T A C G T A T A C G G C A T C T A G C T G A C G T A C G T A T A C G G A C T A C G T A C G T

PB0138.1_Irf4_2/Jaspar

Match Rank:7
Score:0.54
Offset:-1
Orientation:reverse strand
Alignment:-AGAGAGAGAGTAG-
GNNACCGAGAATNNN
 A C G T C G T A A C T G C G T A A C T G C G T A A C T G C G T A A C T G C G T A A C T G A G C T C T G A A C T G A C G T
A T C G G T A C C T G A G C T A A G T C A G T C C A T G T C G A C A T G G C T A C T G A C G A T T C G A A T G C A G C T

ZNF317(Zf)/HEK293-ZNF317.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:8
Score:0.54
Offset:0
Orientation:reverse strand
Alignment:AGAGAGAGAGTAG--
AGAGRRACAGCWGAC
 C G T A A C T G C G T A A C T G C G T A A C T G C G T A A C T G C G T A A C T G A G C T C T G A A C T G A C G T A C G T
T C G A C T A G C G T A C T A G C T G A T C A G C G T A A G T C C G T A T C A G T G A C G C A T A C T G C G T A A G T C

Hand2(bHLH)/Mesoderm-Hand2-ChIP-Seq(GSE61475)/Homer

Match Rank:9
Score:0.53
Offset:0
Orientation:forward strand
Alignment:AGAGAGAGAGTAG--
TGACANARRCCAGRC
 C G T A A C T G C G T A A C T G C G T A A C T G C G T A A C T G C G T A A C T G A G C T C T G A A C T G A C G T A C G T
C G A T C T A G C T G A A T G C C T G A T C G A C G T A C T G A T C G A T A G C A G T C C G T A A C T G T C G A A T G C

Pbx3(Homeobox)/GM12878-PBX3-ChIP-Seq(GSE32465)/Homer

Match Rank:10
Score:0.52
Offset:-1
Orientation:reverse strand
Alignment:-AGAGAGAGAGTAG
NTGATTGACAGN--
 A C G T C G T A A C T G C G T A A C T G C G T A A C T G C G T A A C T G C G T A A C T G A G C T C T G A A C T G
A C G T C G A T A T C G C G T A A C G T C A G T A C T G C T G A A G T C C T G A A T C G A T C G A C G T A C G T