Information for 5-CAGACAGCCTCTSTTG (Motif 7)

A T G C G T C A T A C G G T C A T A G C C T G A A T C G A G T C A G T C A G C T A G T C C G A T A T C G G C A T C A G T A C T G
Reverse Opposite:
T A G C G T C A C G T A T A G C G C T A C T A G C T G A T C A G C T A G A T G C G A C T A T C G A C G T A T G C C A G T A T C G
p-value:1e-14
log p-value:-3.232e+01
Information Content per bp:1.674
Number of Target Sequences with motif15.0
Percentage of Target Sequences with motif1.74%
Number of Background Sequences with motif43.1
Percentage of Background Sequences with motif0.09%
Average Position of motif in Targets49.9 +/- 23.4bp
Average Position of motif in Background42.2 +/- 25.1bp
Strand Bias (log2 ratio + to - strand density)0.2
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Smad4(MAD)/ESC-SMAD4-ChIP-Seq(GSE29422)/Homer

Match Rank:1
Score:0.62
Offset:-1
Orientation:reverse strand
Alignment:-CAGACAGCCTCTSTTG
CCAGACRSVB-------
 A C G T A T G C G T C A T A C G G T C A T A G C C T G A A T C G A G T C A G T C A G C T A G T C C G A T A T C G G C A T C A G T A C T G
T A G C A G T C C G T A A C T G C G T A A G T C C T A G A T C G T A G C A T G C A C G T A C G T A C G T A C G T A C G T A C G T A C G T

Smad2(MAD)/ES-SMAD2-ChIP-Seq(GSE29422)/Homer

Match Rank:2
Score:0.61
Offset:-1
Orientation:reverse strand
Alignment:-CAGACAGCCTCTSTTG
CCAGACAG---------
 A C G T A T G C G T C A T A C G G T C A T A G C C T G A A T C G A G T C A G T C A G C T A G T C C G A T A T C G G C A T C A G T A C T G
A T G C A G T C T G C A C T A G G T C A G T A C C T G A T A C G A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

PB0060.1_Smad3_1/Jaspar

Match Rank:3
Score:0.57
Offset:-6
Orientation:forward strand
Alignment:------CAGACAGCCTCTSTTG
CAAATCCAGACATCACA-----
 A C G T A C G T A C G T A C G T A C G T A C G T A T G C G T C A T A C G G T C A T A G C C T G A A T C G A G T C A G T C A G C T A G T C C G A T A T C G G C A T C A G T A C T G
G T A C C T G A C G T A C G T A C G A T A G T C A G T C T G C A C T A G G T C A G T A C C T G A A C G T A G T C G C T A T A C G G T C A A C G T A C G T A C G T A C G T A C G T

Smad3(MAD)/NPC-Smad3-ChIP-Seq(GSE36673)/Homer

Match Rank:4
Score:0.53
Offset:-1
Orientation:reverse strand
Alignment:-CAGACAGCCTCTSTTG
BCAGACWA---------
 A C G T A T G C G T C A T A C G G T C A T A G C C T G A A T C G A G T C A G T C A G C T A G T C C G A T A T C G G C A T C A G T A C T G
A T G C A G T C C G T A C T A G G T C A A G T C C G T A T C G A A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

PB0151.1_Myf6_2/Jaspar

Match Rank:5
Score:0.51
Offset:-1
Orientation:forward strand
Alignment:-CAGACAGCCTCTSTTG
AGCAACAGCCGCACC--
 A C G T A T G C G T C A T A C G G T C A T A G C C T G A A T C G A G T C A G T C A G C T A G T C C G A T A T C G G C A T C A G T A C T G
T C G A T A C G T G A C T C G A T G C A G A T C T C G A C T A G T G A C T A G C A T C G T A G C C T G A T G A C G A T C A C G T A C G T

KLF10(Zf)/HEK293-KLF10.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:6
Score:0.50
Offset:-1
Orientation:reverse strand
Alignment:-CAGACAGCCTCTSTTG
GGACACACCCCC-----
 A C G T A T G C G T C A T A C G G T C A T A G C C T G A A T C G A G T C A G T C A G C T A G T C C G A T A T C G G C A T C A G T A C T G
T C A G T A C G G T C A A G T C G T C A A G T C C T G A A G T C G T A C G A T C G T A C A G T C A C G T A C G T A C G T A C G T A C G T

POL009.1_DCE_S_II/Jaspar

Match Rank:7
Score:0.50
Offset:2
Orientation:reverse strand
Alignment:CAGACAGCCTCTSTTG
--CACAGN--------
 A T G C G T C A T A C G G T C A T A G C C T G A A T C G A G T C A G T C A G C T A G T C C G A T A T C G G C A T C A G T A C T G
A C G T A C G T T A G C C T G A T A G C G T C A A C T G A T G C A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

SMAD2::SMAD3::SMAD4/MA0513.1/Jaspar

Match Rank:8
Score:0.49
Offset:-6
Orientation:reverse strand
Alignment:------CAGACAGCCTCTSTTG
AGGTGNCAGACAG---------
 A C G T A C G T A C G T A C G T A C G T A C G T A T G C G T C A T A C G G T C A T A G C C T G A A T C G A G T C A G T C A G C T A G T C C G A T A T C G G C A T C A G T A C T G
C T G A C T A G A T C G C G A T A T C G G T C A A T G C C G T A A C T G T G C A A G T C C G T A A T C G A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

PH0141.1_Pknox2/Jaspar

Match Rank:9
Score:0.48
Offset:-3
Orientation:reverse strand
Alignment:---CAGACAGCCTCTSTTG
NNATTGACAGGTGCTT---
 A C G T A C G T A C G T A T G C G T C A T A C G G T C A T A G C C T G A A T C G A G T C A G T C A G C T A G T C C G A T A T C G G C A T C A G T A C T G
T C G A C A G T C G T A C A G T A G C T C T A G C G T A A G T C C T G A C A T G A T C G A G C T T A C G A G T C G A C T C G A T A C G T A C G T A C G T

Hand1::Tcf3/MA0092.1/Jaspar

Match Rank:10
Score:0.47
Offset:-4
Orientation:reverse strand
Alignment:----CAGACAGCCTCTSTTG
ATGCCAGACN----------
 A C G T A C G T A C G T A C G T A T G C G T C A T A C G G T C A T A G C C T G A A T C G A G T C A G T C A G C T A G T C C G A T A T C G G C A T C A G T A C T G
C G T A G C A T C A T G T A G C A G T C C G T A C T A G C G T A G A T C T A G C A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T