Information for 12-RRAAGCASAAKGT (Motif 17)

T C A G C T G A C G T A C G T A A C T G A G T C G T C A A T G C C G T A C G T A A C T G A C T G A C G T
Reverse Opposite:
G T C A A G T C G T A C A C G T A C G T A T C G A C G T A C T G A G T C A C G T A C G T A G C T A G T C
p-value:1e-9
log p-value:-2.234e+01
Information Content per bp:1.871
Number of Target Sequences with motif6.0
Percentage of Target Sequences with motif0.70%
Number of Background Sequences with motif4.5
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets58.8 +/- 25.0bp
Average Position of motif in Background29.8 +/- 24.7bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

SOX10/MA0442.1/Jaspar

Match Rank:1
Score:0.60
Offset:6
Orientation:reverse strand
Alignment:RRAAGCASAAKGT
------ACAAAG-
 T C A G C T G A C G T A C G T A A C T G A G T C G T C A A T G C C G T A C G T A A C T G A C T G A C G T
A C G T A C G T A C G T A C G T A C G T A C G T G T C A A T G C C G T A T G C A C G T A C T A G A C G T

SCRT2/MA0744.1/Jaspar

Match Rank:2
Score:0.59
Offset:2
Orientation:forward strand
Alignment:RRAAGCASAAKGT--
--ATGCAACAGGTGG
 T C A G C T G A C G T A C G T A A C T G A G T C G T C A A T G C C G T A C G T A A C T G A C T G A C G T A C G T A C G T
A C G T A C G T T C G A G C A T A C T G G T A C T G C A C G T A G T A C G T C A T C A G A T C G G C A T C A T G A T C G

RUNX1(Runt)/Jurkat-RUNX1-ChIP-Seq(GSE29180)/Homer

Match Rank:3
Score:0.58
Offset:1
Orientation:forward strand
Alignment:RRAAGCASAAKGT
-AAACCACANN--
 T C A G C T G A C G T A C G T A A C T G A G T C G T C A A T G C C G T A C G T A A C T G A C T G A C G T
A C G T G C T A C T G A T C G A A G T C A G T C C T G A A G T C G T C A C T G A T G C A A C G T A C G T

SCRT1/MA0743.1/Jaspar

Match Rank:4
Score:0.57
Offset:2
Orientation:forward strand
Alignment:RRAAGCASAAKGT----
--GAGCAACAGGTGGTT
 T C A G C T G A C G T A C G T A A C T G A G T C G T C A A T G C C G T A C G T A A C T G A C T G A C G T A C G T A C G T A C G T A C G T
A C G T A C G T T C A G G C T A A C T G G A T C G T C A C G T A G T A C C G T A C T A G A C T G A G C T C A T G A C T G A G C T G A C T

RUNX(Runt)/HPC7-Runx1-ChIP-Seq(GSE22178)/Homer

Match Rank:5
Score:0.57
Offset:0
Orientation:forward strand
Alignment:RRAAGCASAAKGT
NAAACCACAG---
 T C A G C T G A C G T A C G T A A C T G A G T C G T C A A T G C C G T A C G T A A C T G A C T G A C G T
T A G C G C T A T C G A C T G A A G T C A G T C C T G A A G T C C G T A C T A G A C G T A C G T A C G T

SPI1/MA0080.4/Jaspar

Match Rank:6
Score:0.56
Offset:-1
Orientation:forward strand
Alignment:-RRAAGCASAAKGT
AAAAAGCGGAAGTA
 A C G T T C A G C T G A C G T A C G T A A C T G A G T C G T C A A T G C C G T A C G T A A C T G A C T G A C G T
T C G A C T G A C G T A C G T A C G T A T A C G T G A C C T A G A T C G G T C A C G T A A T C G G A C T C G T A

IRF2(IRF)/Erythroblas-IRF2-ChIP-Seq(GSE36985)/Homer

Match Rank:7
Score:0.56
Offset:0
Orientation:forward strand
Alignment:RRAAGCASAAKGT
GAAASYGAAASY-
 T C A G C T G A C G T A C G T A A C T G A G T C G T C A A T G C C G T A C G T A A C T G A C T G A C G T
C T A G T C G A C T G A C G T A T A C G G A C T T C A G T C G A G T C A T G C A T A C G A G C T A C G T

Sox17/MA0078.1/Jaspar

Match Rank:8
Score:0.56
Offset:5
Orientation:reverse strand
Alignment:RRAAGCASAAKGT-
-----GACAATGNN
 T C A G C T G A C G T A C G T A A C T G A G T C G T C A A T G C C G T A C G T A A C T G A C T G A C G T A C G T
A C G T A C G T A C G T A C G T A C G T T A C G G T C A A G T C C G T A C T G A C G A T C T A G C G T A C T A G

Nr5a2/MA0505.1/Jaspar

Match Rank:9
Score:0.55
Offset:2
Orientation:forward strand
Alignment:RRAAGCASAAKGT----
--AAGTTCAAGGTCAGC
 T C A G C T G A C G T A C G T A A C T G A G T C G T C A A T G C C G T A C G T A A C T G A C T G A C G T A C G T A C G T A C G T A C G T
A C G T A C G T T C G A C T G A C T A G A G C T G A C T T A G C G T C A C T G A C T A G A C T G G A C T A G T C C G T A A C T G A T G C

Myc/MA0147.2/Jaspar

Match Rank:10
Score:0.55
Offset:2
Orientation:reverse strand
Alignment:RRAAGCASAAKGT
--AAGCACATGG-
 T C A G C T G A C G T A C G T A A C T G A G T C G T C A A T G C C G T A C G T A A C T G A C T G A C G T
A C G T A C G T T C G A C T G A T A C G A G T C C G T A A G T C C T G A A C G T A C T G A C T G A C G T