Information for 6-CMGCWSCYGSCTCTGS (Motif 8)

A G T C T G C A A T C G A G T C C G A T A T G C A T G C G A C T A T C G A T C G A G T C A C G T A G T C A G C T A T C G A T C G
Reverse Opposite:
T A G C A T G C C T G A A C T G C G T A T C A G A T G C A T G C C T G A A T C G T A C G C G T A A C T G A T G C A C G T T C A G
p-value:1e-13
log p-value:-3.217e+01
Information Content per bp:1.706
Number of Target Sequences with motif16.0
Percentage of Target Sequences with motif1.86%
Number of Background Sequences with motif53.4
Percentage of Background Sequences with motif0.11%
Average Position of motif in Targets58.6 +/- 27.5bp
Average Position of motif in Background52.6 +/- 28.7bp
Strand Bias (log2 ratio + to - strand density)-0.5
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0003.1_Ascl2_1/Jaspar

Match Rank:1
Score:0.56
Offset:-2
Orientation:forward strand
Alignment:--CMGCWSCYGSCTCTGS
CTCAGCAGCTGCTACTG-
 A C G T A C G T A G T C T G C A A T C G A G T C C G A T A T G C A T G C G A C T A T C G A T C G A G T C A C G T A G T C A G C T A T C G A T C G
A G T C A C G T A G T C T C G A T C A G A G T C C G T A A T C G T A G C C G A T A C T G A G T C A G C T T G A C G A T C G C A T C A T G A C G T

POL013.1_MED-1/Jaspar

Match Rank:2
Score:0.54
Offset:9
Orientation:forward strand
Alignment:CMGCWSCYGSCTCTGS
---------GCTCCG-
 A G T C T G C A A T C G A G T C C G A T A T G C A T G C G A C T A T C G A T C G A G T C A C G T A G T C A G C T A T C G A T C G
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C T G A G T C A C G T A G T C A G T C A T C G A C G T

Myod1/MA0499.1/Jaspar

Match Rank:3
Score:0.54
Offset:1
Orientation:forward strand
Alignment:CMGCWSCYGSCTCTGS
-TGCAGCTGTCCCT--
 A G T C T G C A A T C G A G T C C G A T A T G C A T G C G A C T A T C G A T C G A G T C A C G T A G T C A G C T A T C G A T C G
A C G T G C A T T A C G A G T C C G T A A T C G A G T C A C G T A C T G A G C T A G T C T A G C A G T C A G C T A C G T A C G T

ZSCAN22(Zf)/HEK293-ZSCAN22.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:4
Score:0.54
Offset:1
Orientation:reverse strand
Alignment:CMGCWSCYGSCTCTGS-----
-GCCTCCTCCMTCWGACTGKS
 A G T C T G C A A T C G A G T C C G A T A T G C A T G C G A C T A T C G A T C G A G T C A C G T A G T C A G C T A T C G A T C G A C G T A C G T A C G T A C G T A C G T
A C G T T A C G G A T C G A T C G A C T A G T C A G T C G C A T A G T C A G T C G T A C A G C T A G T C G C T A T C A G C T G A A G T C G A C T T A C G A C T G T A G C

Ascl1(bHLH)/NeuralTubes-Ascl1-ChIP-Seq(GSE55840)/Homer

Match Rank:5
Score:0.54
Offset:1
Orientation:reverse strand
Alignment:CMGCWSCYGSCTCTGS
-NVCAGCTGBBNN---
 A G T C T G C A A T C G A G T C C G A T A T G C A T G C G A C T A T C G A T C G A G T C A C G T A G T C A G C T A T C G A T C G
A C G T T C G A T A C G G T A C C G T A A T C G T G A C C G A T A C T G A T G C A T G C T C A G G A T C A C G T A C G T A C G T

HEB(bHLH)/mES-Heb-ChIP-Seq(GSE53233)/Homer

Match Rank:6
Score:0.52
Offset:2
Orientation:forward strand
Alignment:CMGCWSCYGSCTCTGS
--VCAGCTGBNN----
 A G T C T G C A A T C G A G T C C G A T A T G C A T G C G A C T A T C G A T C G A G T C A C G T A G T C A G C T A T C G A T C G
A C G T A C G T T G A C A T G C C G T A A T C G A T G C C A G T C A T G A C T G A G T C G T A C A C G T A C G T A C G T A C G T

Tcf12(bHLH)/GM12878-Tcf12-ChIP-Seq(GSE32465)/Homer

Match Rank:7
Score:0.52
Offset:0
Orientation:reverse strand
Alignment:CMGCWSCYGSCTCTGS
CAGCAGCTGN------
 A G T C T G C A A T C G A G T C C G A T A T G C A T G C G A C T A T C G A T C G A G T C A C G T A G T C A G C T A T C G A T C G
T G A C T C G A T C A G A G T C C G T A A T C G A T G C A C G T A C T G A G C T A C G T A C G T A C G T A C G T A C G T A C G T

Myog/MA0500.1/Jaspar

Match Rank:8
Score:0.51
Offset:0
Orientation:reverse strand
Alignment:CMGCWSCYGSCTCTGS
NNGCAGCTGTC-----
 A G T C T G C A A T C G A G T C C G A T A T G C A T G C G A C T A T C G A T C G A G T C A C G T A G T C A G C T A T C G A T C G
A T G C G A C T A T C G A G T C C G T A A T C G A G T C A C G T A C T G A G C T A G T C A C G T A C G T A C G T A C G T A C G T

Hand1::Tcf3/MA0092.1/Jaspar

Match Rank:9
Score:0.51
Offset:9
Orientation:forward strand
Alignment:CMGCWSCYGSCTCTGS---
---------GGTCTGGCAT
 A G T C T G C A A T C G A G T C C G A T A T G C A T G C G A C T A T C G A T C G A G T C A C G T A G T C A G C T A T C G A T C G A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A T C G C T A G G A C T A G T C A C G T A C T G A T C G G T A C C G T A C G A T

E2A(bHLH)/proBcell-E2A-ChIP-Seq(GSE21978)/Homer

Match Rank:10
Score:0.51
Offset:2
Orientation:reverse strand
Alignment:CMGCWSCYGSCTCTGS
--GCAGCTGTNN----
 A G T C T G C A A T C G A G T C C G A T A T G C A T G C G A C T A T C G A T C G A G T C A C G T A G T C A G C T A T C G A T C G
A C G T A C G T T C A G A G T C C G T A A T C G T A G C A C G T A C T G A G C T A C T G G C A T A C G T A C G T A C G T A C G T