Homer de novo Motif Results (hs_HepatocellularCarcin_HepG2_Cancer_FOXA1_SRX1035063_homermotifs_10_13_16/)

Known Motif Enrichment Results
Gene Ontology Enrichment Results
If Homer is having trouble matching a motif to a known motif, try copy/pasting the matrix file into STAMP
More information on motif finding results: HOMER | Description of Results | Tips
Total target sequences = 779
Total background sequences = 46662
* - possible false positive
RankMotifP-valuelog P-pvalue% of Targets% of Background STD(Bg STD) Best Match/DetailsMotif File
1 A C G T C T A G A C G T A C G T A C G T C T G A G A T C G C A T A G C T C G T A C A T G A T G C G A T C 1e-232-5.347e+0236.20%2.61%22.7bp (33.0bp)FOXA1/MA0148.3/Jaspar(0.970)
More Information | Similar Motifs Found
motif file (matrix)
2 C A T G T A C G G T C A T A G C A G C T A G C T A C G T C T A G C T G A G C T A T A G C G C A T A C G T 1e-32-7.466e+018.34%1.21%27.0bp (30.3bp)HNF4G/MA0484.1/Jaspar(0.919)
More Information | Similar Motifs Found
motif file (matrix)
3 T A C G C G T A C G A T A T G C C G T A T C G A C G T A A T G C C G T A C T A G C G T A C G T A A G T C 1e-18-4.167e+011.80%0.04%23.4bp (27.5bp)PB0083.1_Tcf7_1/Jaspar(0.707)
More Information | Similar Motifs Found
motif file (matrix)
4 C T A G C G A T A C G T C T G A C G T A C A T G T G A C C G T A C A G T A C G T G C T A G T C A A G C T 1e-17-3.923e+012.18%0.10%23.0bp (28.0bp)HNF1B/MA0153.2/Jaspar(0.892)
More Information | Similar Motifs Found
motif file (matrix)
5 G A C T A C G T G T C A A G T C A C G T A G T C A C G T A G C T A C G T A C T G G T C A C G T A A C T G 1e-15-3.464e+011.03%0.01%28.1bp (13.7bp)Tcf3(HMG)/mES-Tcf3-ChIP-Seq(GSE11724)/Homer(0.627)
More Information | Similar Motifs Found
motif file (matrix)
6 G C A T C G T A A C G T C G T A A C G T A T C G C G A T G T C A A G T C G C T A A G C T A C G T T A C G 1e-13-3.166e+012.18%0.16%27.7bp (25.1bp)Erra(NR)/HepG2-Erra-ChIP-Seq(GSE31477)/Homer(0.623)
More Information | Similar Motifs Found
motif file (matrix)
7 C T G A A C G T A C G T C T G A C T G A A T C G A G T C C G T A G T C A A G T C 1e-13-3.139e+012.70%0.28%23.8bp (31.3bp)CEBP(bZIP)/ThioMac-CEBPb-ChIP-Seq(GSE21512)/Homer(0.810)
More Information | Similar Motifs Found
motif file (matrix)
8 A C T G G T C A G T A C C G T A C G T A A G T C C G T A A C T G A C T G G T A C A G T C A G T C G A T C 1e-13-3.117e+010.77%0.00%20.6bp (11.2bp)Foxo1/MA0480.1/Jaspar(0.707)
More Information | Similar Motifs Found
motif file (matrix)
9 A G T C C G T A C G T A A C T G G A T C A G T C C G A T C G T A C G T A A G T C C G T A A C G T A C G T 1e-13-3.117e+010.77%0.00%16.6bp (10.6bp)NF1:FOXA1(CTF,Forkhead)/LNCAP-FOXA1-ChIP-Seq(GSE27824)/Homer(0.605)
More Information | Similar Motifs Found
motif file (matrix)
10 A G T C A G T C A C G T A C T G C G T A A C T G C A T G G C T A C A G T A G C T A C T G G T C A C G A T A C G T C A T G C T G A 1e-13-3.117e+010.77%0.00%23.0bp (0.0bp)TFAP2A/MA0003.3/Jaspar(0.577)
More Information | Similar Motifs Found
motif file (matrix)
11 * C A G T T C A G C A G T A T C G G C T A A G T C C G A T T A G C C G T A A G C T 1e-11-2.721e+013.85%0.77%26.4bp (29.4bp)Atf3(bZIP)/GBM-ATF3-ChIP-Seq(GSE33912)/Homer(0.959)
More Information | Similar Motifs Found
motif file (matrix)
12 * C T A G C A G T C G T A A G C T A C G T C T A G C G T A A T G C A G T C A C G T 1e-10-2.315e+011.67%0.13%22.3bp (31.8bp)THRb(NR)/Liver-NR1A2-ChIP-Seq(GSE52613)/Homer(0.762)
More Information | Similar Motifs Found
motif file (matrix)
13 * G A T C C T G A C T A G A C T G C G A T A G C T G T C A A G T C A C G T A T C G 1e-9-2.187e+012.31%0.33%19.8bp (35.9bp)Six1(Homeobox)/Myoblast-Six1-ChIP-Chip(GSE20150)/Homer(0.641)
More Information | Similar Motifs Found
motif file (matrix)
14 * A T G C C G T A C T A G G T A C C G A T A C T G G C A T C G A T A C T G T G A C C G T A C G T A G T A C C G T A G T C A C G T A 1e-9-2.182e+010.64%0.01%14.9bp (0.0bp)CEBP:AP1(bZIP)/ThioMac-CEBPb-ChIP-Seq(GSE21512)/Homer(0.640)
More Information | Similar Motifs Found
motif file (matrix)
15 * A C G T A C T G A C T G G T A C C G T A C G T A A G T C C G T A C G A T A C T G C G T A C G A T C G T A 1e-9-2.157e+010.77%0.01%26.1bp (28.9bp)Six2(Homeobox)/NephronProgenitor-Six2-ChIP-Seq(GSE39837)/Homer(0.644)
More Information | Similar Motifs Found
motif file (matrix)
16 * A G T C A G T C C G T A C T A G G T A C A G T C A G T C A G T C A G T C A G T C C G T A A G T C A G T C 1e-7-1.839e+010.64%0.01%20.7bp (7.8bp)PB0097.1_Zfp281_1/Jaspar(0.712)
More Information | Similar Motifs Found
motif file (matrix)
17 * A G C T A T G C C G T A C G T A C G T A A C G T T G C A C G A T A C G T A C G T 1e-5-1.359e+012.31%0.58%27.7bp (27.7bp)Arid5a/MA0602.1/Jaspar(0.711)
More Information | Similar Motifs Found
motif file (matrix)