Information for 13-TCAAATATTT (Motif 17)

A G C T A T G C C G T A C G T A C G T A A C G T T G C A C G A T A C G T A C G T
Reverse Opposite:
C G T A C G T A C G T A A C G T C G T A A C G T A C G T A C G T T A C G C T G A
p-value:1e-5
log p-value:-1.359e+01
Information Content per bp:1.854
Number of Target Sequences with motif18.0
Percentage of Target Sequences with motif2.31%
Number of Background Sequences with motif272.0
Percentage of Background Sequences with motif0.58%
Average Position of motif in Targets53.2 +/- 27.7bp
Average Position of motif in Background48.6 +/- 27.7bp
Strand Bias (log2 ratio + to - strand density)-0.6
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Arid5a/MA0602.1/Jaspar

Match Rank:1
Score:0.71
Offset:1
Orientation:forward strand
Alignment:TCAAATATTT-----
-CTAATATTGCTAAA
 A G C T A T G C C G T A C G T A C G T A A C G T T G C A C G A T A C G T A C G T A C G T A C G T A C G T A C G T A C G T
A C G T T A G C G A C T C T G A C G T A C G A T C G T A C G A T A G C T C T A G T G A C C G A T C T G A C G T A G C T A

PB0002.1_Arid5a_1/Jaspar

Match Rank:2
Score:0.71
Offset:1
Orientation:forward strand
Alignment:TCAAATATTT-----
-CTAATATTGCTAAA
 A G C T A T G C C G T A C G T A C G T A A C G T T G C A C G A T A C G T A C G T A C G T A C G T A C G T A C G T A C G T
A C G T T A G C G A C T C T G A C G T A C G A T C G T A C G A T A G C T C T A G T G A C C G A T C T G A C G T A G C T A

MF0010.1_Homeobox_class/Jaspar

Match Rank:3
Score:0.68
Offset:3
Orientation:forward strand
Alignment:TCAAATATTT
---AATAATT
 A G C T A T G C C G T A C G T A C G T A A C G T T G C A C G A T A C G T A C G T
A C G T A C G T A C G T G C T A C G T A G C A T C T G A C T G A C G A T C G A T

PB0066.1_Sox17_1/Jaspar

Match Rank:4
Score:0.63
Offset:-3
Orientation:reverse strand
Alignment:---TCAAATATTT--
NNATNAATTGTTTNN
 A C G T A C G T A C G T A G C T A T G C C G T A C G T A C G T A A C G T T G C A C G A T A C G T A C G T A C G T A C G T
G C A T C T A G C G A T C G A T A G C T G C T A C G T A G C A T C G A T T C A G C G A T A C G T G A C T G C T A A C G T

LIN54/MA0619.1/Jaspar

Match Rank:5
Score:0.61
Offset:-3
Orientation:reverse strand
Alignment:---TCAAATATTT
NATTCAAAT----
 A C G T A C G T A C G T A G C T A T G C C G T A C G T A C G T A A C G T T G C A C G A T A C G T A C G T
C T G A C T G A A C G T A C G T A G T C C T G A C G T A C G T A G C A T A C G T A C G T A C G T A C G T

Foxd3/MA0041.1/Jaspar

Match Rank:6
Score:0.59
Offset:2
Orientation:forward strand
Alignment:TCAAATATTT----
--GAATGTTTGTTT
 A G C T A T G C C G T A C G T A C G T A A C G T T G C A C G A T A C G T A C G T A C G T A C G T A C G T A C G T
A C G T A C G T C T A G G C T A G C T A G A C T C T A G A C G T C G A T C A G T C T A G G A C T A C G T A G C T

FOXC1/MA0032.2/Jaspar

Match Rank:7
Score:0.59
Offset:4
Orientation:reverse strand
Alignment:TCAAATATTT-----
----ATATTTACATA
 A G C T A T G C C G T A C G T A C G T A A C G T T G C A C G A T A C G T A C G T A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T C G T A G A C T T C G A G A C T C A G T C A G T C G T A A G T C G C T A G A C T C G T A

CHR(?)/Hela-CellCycle-Expression/Homer

Match Rank:8
Score:0.59
Offset:-5
Orientation:forward strand
Alignment:-----TCAAATATTT
CGGTTTCAAA-----
 A C G T A C G T A C G T A C G T A C G T A G C T A T G C C G T A C G T A C G T A A C G T T G C A C G A T A C G T A C G T
T A G C T C A G C A T G G C A T A G C T C G A T A T G C C G T A C G T A G T C A A C G T A C G T A C G T A C G T A C G T

PH0146.1_Pou3f1/Jaspar

Match Rank:9
Score:0.58
Offset:-3
Orientation:reverse strand
Alignment:---TCAAATATTT----
NANTTAATTAATTANNN
 A C G T A C G T A C G T A G C T A T G C C G T A C G T A C G T A A C G T T G C A C G A T A C G T A C G T A C G T A C G T A C G T A C G T
C A T G G C T A T G C A A G C T C A G T G T C A G C T A C G A T C G A T G C T A C G T A C A G T C A G T G T C A T C G A A C G T G A C T

PB0146.1_Mafk_2/Jaspar

Match Rank:10
Score:0.58
Offset:-3
Orientation:reverse strand
Alignment:---TCAAATATTT--
CCTTGCAATTTTTNN
 A C G T A C G T A C G T A G C T A T G C C G T A C G T A C G T A A C G T T G C A C G A T A C G T A C G T A C G T A C G T
A G T C T A G C C A G T A C G T C T A G G T A C C T G A G T C A C G A T C G A T G A C T G A C T A G C T C A G T A G T C