Information for 10-TATATSDMCWTKG (Motif 6)

G C A T C G T A A C G T C G T A A C G T A T C G C G A T G T C A A G T C G C T A A G C T A C G T T A C G
Reverse Opposite:
A G T C G T C A C T G A C G A T C T A G A C G T G C T A A T G C C G T A G C A T T G C A A C G T C G T A
p-value:1e-13
log p-value:-3.166e+01
Information Content per bp:1.686
Number of Target Sequences with motif17.0
Percentage of Target Sequences with motif2.18%
Number of Background Sequences with motif72.5
Percentage of Background Sequences with motif0.16%
Average Position of motif in Targets53.6 +/- 27.7bp
Average Position of motif in Background56.1 +/- 25.1bp
Strand Bias (log2 ratio + to - strand density)0.4
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Erra(NR)/HepG2-Erra-ChIP-Seq(GSE31477)/Homer

Match Rank:1
Score:0.62
Offset:3
Orientation:reverse strand
Alignment:TATATSDMCWTKG
---CTGACCTTTG
 G C A T C G T A A C G T C G T A A C G T A T C G C G A T G T C A A G T C G C T A A G C T A C G T T A C G
A C G T A C G T A C G T A T G C A C G T T A C G T G C A G T A C A G T C G A C T A G C T A C G T T C A G

HNF4a(NR),DR1/HepG2-HNF4a-ChIP-Seq(GSE25021)/Homer

Match Rank:2
Score:0.61
Offset:4
Orientation:reverse strand
Alignment:TATATSDMCWTKG-------
----TGGACTTTGNNCTNTG
 G C A T C G T A A C G T C G T A A C G T A T C G C G A T G T C A A G T C G C T A A G C T A C G T T A C G A C G T A C G T A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T C G A T C T A G T C A G G T C A G T A C G A C T A G C T A C G T C T A G T C G A G T A C G A T C G A C T A G T C C G A T C A T G

HNF4G/MA0484.1/Jaspar

Match Rank:3
Score:0.61
Offset:4
Orientation:reverse strand
Alignment:TATATSDMCWTKG------
----TGGACTTTGNNCTCN
 G C A T C G T A A C G T C G T A A C G T A T C G C G A T G T C A A G T C G C T A A G C T A C G T T A C G A C G T A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T C G A T C T A G T C A G G T C A G T A C G A C T A G C T A C G T T C A G T C A G G T C A G A T C G A C T A G T C G C A T

PH0087.1_Irx6/Jaspar

Match Rank:4
Score:0.60
Offset:-5
Orientation:reverse strand
Alignment:-----TATATSDMCWTKG
ANTTNTACATGTANTTN-
 A C G T A C G T A C G T A C G T A C G T G C A T C G T A A C G T C G T A A C G T A T C G C G A T G T C A A G T C G C T A A G C T A C G T T A C G
G C T A C G A T C G A T G C A T A C G T C G A T C G T A A G T C C G T A G C A T C T A G C G A T G C T A G A C T C G A T C G A T C G A T A C G T

FOXB1/MA0845.1/Jaspar

Match Rank:5
Score:0.60
Offset:1
Orientation:reverse strand
Alignment:TATATSDMCWTKG
-ATATTTACATA-
 G C A T C G T A A C G T C G T A A C G T A T C G C G A T G T C A A G T C G C T A A G C T A C G T T A C G
A C G T C G T A G A C T T C G A C G A T C G A T A C G T C T G A G A T C G C T A G A C T C G T A A C G T

PB0053.1_Rara_1/Jaspar

Match Rank:6
Score:0.59
Offset:0
Orientation:reverse strand
Alignment:TATATSDMCWTKG---
NNNGTGACCTTTGNNN
 G C A T C G T A A C G T C G T A A C G T A T C G C G A T G T C A A G T C G C T A A G C T A C G T T A C G A C G T A C G T A C G T
G T A C C G T A A T C G C T A G A G C T T C A G G T C A G T A C G T A C A G C T A G C T C G A T C A T G T C G A C A T G G T C A

SF1(NR)/H295R-Nr5a1-ChIP-Seq(GSE44220)/Homer

Match Rank:7
Score:0.58
Offset:2
Orientation:reverse strand
Alignment:TATATSDMCWTKG
--BNTGDCCTTG-
 G C A T C G T A A C G T C G T A A C G T A T C G C G A T G T C A A G T C G C T A A G C T A C G T T A C G
A C G T A C G T A T G C C A T G A C G T C T A G C T G A T G A C T G A C G A C T G C A T A C T G A C G T

PH0082.1_Irx2/Jaspar

Match Rank:8
Score:0.58
Offset:-5
Orientation:reverse strand
Alignment:-----TATATSDMCWTKG
ANTNTTACATGTATNTA-
 A C G T A C G T A C G T A C G T A C G T G C A T C G T A A C G T C G T A A C G T A T C G C G A T G T C A A G T C G C T A A G C T A C G T T A C G
C G T A T G C A G C A T G A C T G A C T C G A T C G T A A G T C C G T A G C A T T A C G C G A T G C T A G A C T G C A T C G A T G C T A A C G T

PH0084.1_Irx3_2/Jaspar

Match Rank:9
Score:0.57
Offset:-5
Orientation:reverse strand
Alignment:-----TATATSDMCWTKG
NNTATTACATGTANNNT-
 A C G T A C G T A C G T A C G T A C G T G C A T C G T A A C G T C G T A A C G T A T C G C G A T G T C A A G T C G C T A A G C T A C G T T A C G
G C A T C T G A G C A T G C T A A C G T C G A T C G T A G A T C C G T A G C A T C T A G C G A T G C T A C G A T G C T A G C A T G C A T A C G T

PB0096.1_Zfp187_1/Jaspar

Match Rank:10
Score:0.57
Offset:-1
Orientation:reverse strand
Alignment:-TATATSDMCWTKG
TTATTAGTACATAN
 A C G T G C A T C G T A A C G T C G T A A C G T A T C G C G A T G T C A A G T C G C T A A G C T A C G T T A C G
C A G T C G A T C G T A G A C T C G A T T C G A C T A G G A C T G C T A A G T C C T G A A G C T C T G A T C G A