Information for 7-GTTAAKVATTAMY (Motif 4)

C T A G C G A T A C G T C T G A C G T A C A T G T G A C C G T A C A G T A C G T G C T A G T C A A G C T
Reverse Opposite:
T C G A C A G T C G A T C G T A G T C A C G A T A C T G G T A C C G A T A G C T C G T A C G T A A G T C
p-value:1e-17
log p-value:-3.923e+01
Information Content per bp:1.725
Number of Target Sequences with motif17.0
Percentage of Target Sequences with motif2.18%
Number of Background Sequences with motif45.3
Percentage of Background Sequences with motif0.10%
Average Position of motif in Targets61.0 +/- 23.0bp
Average Position of motif in Background43.9 +/- 28.0bp
Strand Bias (log2 ratio + to - strand density)0.5
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

HNF1B/MA0153.2/Jaspar

Match Rank:1
Score:0.89
Offset:0
Orientation:forward strand
Alignment:GTTAAKVATTAMY
GTTAATGATTAAC
 C T A G C G A T A C G T C T G A C G T A C A T G T G A C C G T A C A G T A C G T G C T A G T C A A G C T
C A T G A G C T G C A T C T G A G T C A G C A T T A C G C G T A C A G T G A C T C T G A T C G A G A T C

HNF1A/MA0046.2/Jaspar

Match Rank:2
Score:0.89
Offset:-1
Orientation:reverse strand
Alignment:-GTTAAKVATTAMY-
NGTTAATNATTAACN
 A C G T C T A G C G A T A C G T C T G A C G T A C A T G T G A C C G T A C A G T A C G T G C T A G T C A A G C T A C G T
C G T A C A T G A G C T G C A T C T G A G T C A G C A T A T G C C G T A C A G T G A C T C G T A T C G A G A T C G A C T

HNF1b(Homeobox)/PDAC-HNF1B-ChIP-Seq(GSE64557)/Homer

Match Rank:3
Score:0.89
Offset:0
Orientation:forward strand
Alignment:GTTAAKVATTAMY
GTTAATNATTAA-
 C T A G C G A T A C G T C T G A C G T A C A T G T G A C C G T A C A G T A C G T G C T A G T C A A G C T
C T A G A C G T G C A T T C G A G T C A G C A T A T C G C G T A C A G T A G C T C T G A T G C A A C G T

Hnf1(Homeobox)/Liver-Foxa2-Chip-Seq(GSE25694)/Homer

Match Rank:4
Score:0.85
Offset:-1
Orientation:forward strand
Alignment:-GTTAAKVATTAMY
GGTTAAACATTAA-
 A C G T C T A G C G A T A C G T C T G A C G T A C A T G T G A C C G T A C A G T A C G T G C T A G T C A A G C T
C T A G C T A G G C A T C G A T C T G A G T C A G C T A A T G C C G T A C A G T G A C T C G T A T G C A A C G T

PH0051.1_Hoxa4/Jaspar

Match Rank:5
Score:0.70
Offset:-3
Orientation:reverse strand
Alignment:---GTTAAKVATTAMY-
CNAGTTAATTAATAANN
 A C G T A C G T A C G T C T A G C G A T A C G T C T G A C G T A C A T G T G A C C G T A C A G T A C G T G C T A G T C A A G C T A C G T
T G A C T C G A G T C A T C A G G C A T G A C T G T C A C G T A G A C T A C G T C T G A C G T A A G C T C T G A C T G A G A C T G A T C

NKX6-1/MA0674.1/Jaspar

Match Rank:6
Score:0.67
Offset:1
Orientation:reverse strand
Alignment:GTTAAKVATTAMY
-TTAATTAN----
 C T A G C G A T A C G T C T G A C G T A C A T G T G A C C G T A C A G T A C G T G C T A G T C A A G C T
A C G T C G A T A G C T C G T A C G T A C A G T C A G T C T G A A T G C A C G T A C G T A C G T A C G T

PH0059.1_Hoxb4/Jaspar

Match Rank:7
Score:0.67
Offset:-3
Orientation:forward strand
Alignment:---GTTAAKVATTAMY-
CGCGTTAATTAATTACC
 A C G T A C G T A C G T C T A G C G A T A C G T C T G A C G T A C A T G T G A C C G T A C A G T A C G T G C T A G T C A A G C T A C G T
T A G C C T A G G T A C C T A G G A C T G A C T G T C A C G T A C G A T A C G T C T G A C T G A A G C T G C A T T G C A G T A C A G T C

PH0019.1_Dbx2/Jaspar

Match Rank:8
Score:0.66
Offset:-4
Orientation:forward strand
Alignment:----GTTAAKVATTAMY
TTTAATTAATTAATTC-
 A C G T A C G T A C G T A C G T C T A G C G A T A C G T C T G A C G T A C A T G T G A C C G T A C A G T A C G T G C T A G T C A A G C T
A C G T C A G T G A C T G T C A C G T A G C A T G A C T C G T A C G T A C G A T C A G T C T G A C G T A A C G T G C A T G T A C A C G T

PH0136.1_Phox2b/Jaspar

Match Rank:9
Score:0.66
Offset:-3
Orientation:reverse strand
Alignment:---GTTAAKVATTAMY-
CNNNTTAATTAATTNNN
 A C G T A C G T A C G T C T A G C G A T A C G T C T G A C G T A C A T G T G A C C G T A C A G T A C G T G C T A G T C A A G C T A C G T
A T G C T A G C G A C T T C G A G A C T G A C T T C G A C G T A G A C T A G C T C T G A C T G A A C G T C A G T T G A C A G T C A T C G

Nkx6.1(Homeobox)/Islet-Nkx6.1-ChIP-Seq(GSE40975)/Homer

Match Rank:10
Score:0.66
Offset:0
Orientation:forward strand
Alignment:GTTAAKVATTAMY
GKTAATGR-----
 C T A G C G A T A C G T C T G A C G T A C A T G T G A C C G T A C A G T A C G T G C T A G T C A A G C T
A C T G C A G T A C G T C G T A C G T A A C G T A C T G C T G A A C G T A C G T A C G T A C G T A C G T