Information for 17-TGGMWACAWGATA (Motif 15)

A C G T A C T G A C T G G T A C C G T A C G T A A G T C C G T A C G A T A C T G C G T A C G A T C G T A
Reverse Opposite:
C G A T C G T A A C G T A G T C G C A T A C G T A C T G A C G T C G A T C A T G A G T C A G T C C G T A
p-value:1e-9
log p-value:-2.157e+01
Information Content per bp:1.887
Number of Target Sequences with motif6.0
Percentage of Target Sequences with motif0.77%
Number of Background Sequences with motif5.0
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets40.3 +/- 26.1bp
Average Position of motif in Background41.0 +/- 28.9bp
Strand Bias (log2 ratio + to - strand density)1.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Six2(Homeobox)/NephronProgenitor-Six2-ChIP-Seq(GSE39837)/Homer

Match Rank:1
Score:0.64
Offset:2
Orientation:forward strand
Alignment:TGGMWACAWGATA-
--GWAAYHTGAKMC
 A C G T A C T G A C T G G T A C C G T A C G T A A G T C C G T A C G A T A C T G C G T A C G A T C G T A A C G T
A C G T A C G T C T A G C G T A G T C A C G T A A G T C G A T C A G C T C T A G C G T A A C G T G T C A G A T C

Six1(Homeobox)/Myoblast-Six1-ChIP-Chip(GSE20150)/Homer

Match Rank:2
Score:0.64
Offset:2
Orientation:reverse strand
Alignment:TGGMWACAWGATA-
--GWAAYHTGABMC
 A C G T A C T G A C T G G T A C C G T A C G T A A G T C C G T A C G A T A C T G C G T A C G A T C G T A A C G T
A C G T A C G T A C T G C G A T G T C A C G T A A G T C G T A C G C A T A C T G C G T A A C G T G T A C G A T C

Foxo1/MA0480.1/Jaspar

Match Rank:3
Score:0.61
Offset:0
Orientation:reverse strand
Alignment:TGGMWACAWGATA
TGTAAACAGGA--
 A C G T A C T G A C T G G T A C C G T A C G T A A G T C C G T A C G A T A C T G C G T A C G A T C G T A
C G A T C T A G C G A T G T C A C G T A C G T A A G T C C G T A T C A G T A C G G T C A A C G T A C G T

Mecom/MA0029.1/Jaspar

Match Rank:4
Score:0.60
Offset:2
Orientation:forward strand
Alignment:TGGMWACAWGATA---
--AAGATAAGATAACA
 A C G T A C T G A C T G G T A C C G T A C G T A A G T C C G T A C G A T A C T G C G T A C G A T C G T A A C G T A C G T A C G T
A C G T A C G T C T G A C G T A A C T G C G T A G A C T C G T A C T G A A C T G C G T A A G C T G C T A C T G A A C G T G T C A

PB0105.1_Arid3a_2/Jaspar

Match Rank:5
Score:0.60
Offset:3
Orientation:reverse strand
Alignment:TGGMWACAWGATA-----
---NNATNTGATANNNNN
 A C G T A C T G A C T G G T A C C G T A C G T A A G T C C G T A C G A T A C T G C G T A C G A T C G T A A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T G T C A C T G A G C T A A G C T G C A T G A C T A T C G T C G A A G C T T C G A A G T C A T C G A C T G C A T G C A G T

DMRT3/MA0610.1/Jaspar

Match Rank:6
Score:0.59
Offset:-1
Orientation:reverse strand
Alignment:-TGGMWACAWGATA
NTTGATACATT---
 A C G T A C G T A C T G A C T G G T A C C G T A C G T A A G T C C G T A C G A T A C T G C G T A C G A T C G T A
C G T A C G A T A C G T A C T G G C T A A C G T C G T A A G T C C G T A C G A T A C G T A C G T A C G T A C G T

FOXK2(Forkhead)/U2OS-FOXK2-ChIP-Seq(E-MTAB-2204)/Homer

Match Rank:7
Score:0.58
Offset:-1
Orientation:reverse strand
Alignment:-TGGMWACAWGATA
ATGTAAACADGS--
 A C G T A C G T A C T G A C T G G T A C C G T A C G T A A G T C C G T A C G A T A C T G C G T A C G A T C G T A
C G T A C A G T T C A G C G A T G T C A G T C A C G T A A G T C C G T A C G A T A T C G A T G C A C G T A C G T

Rfx5(HTH)/GM12878-Rfx5-ChIP-Seq(GSE31477)/Homer

Match Rank:8
Score:0.58
Offset:-3
Orientation:forward strand
Alignment:---TGGMWACAWGATA
SCCTAGCAACAG----
 A C G T A C G T A C G T A C G T A C T G A C T G G T A C C G T A C G T A A G T C C G T A C G A T A C T G C G T A C G A T C G T A
A T G C A G T C G T A C A G C T T C G A C T A G G A T C C T G A G T C A A G T C G C T A T C A G A C G T A C G T A C G T A C G T

PB0160.1_Rfxdc2_2/Jaspar

Match Rank:9
Score:0.57
Offset:-5
Orientation:forward strand
Alignment:-----TGGMWACAWGATA
CTACTTGGATACGGAAT-
 A C G T A C G T A C G T A C G T A C G T A C G T A C T G A C T G G T A C C G T A C G T A A G T C C G T A C G A T A C T G C G T A C G A T C G T A
A T G C A C G T T C G A A T G C C A G T G A C T T C A G A C T G C G T A A C G T C G T A G A T C T A C G T A C G C G T A C G T A G C A T A C G T

DMRT1(DM)/Testis-DMRT1-ChIP-Seq(GSE64892)/Homer

Match Rank:10
Score:0.57
Offset:0
Orientation:forward strand
Alignment:TGGMWACAWGATA--
TWGHWACAWTGTWDC
 A C G T A C T G A C T G G T A C C G T A C G T A A G T C C G T A C G A T A C T G C G T A C G A T C G T A A C G T A C G T
G C A T C G A T C T A G G C T A G C A T C G T A G A T C G C T A C G A T C G A T C T A G C G A T C G T A C G A T G A T C