Rank | Motif | Name | P-value | log P-pvalue | q-value (Benjamini) | # Target Sequences with Motif | % of Targets Sequences with Motif | # Background Sequences with Motif | % of Background Sequences with Motif | Motif File |
SVG |
1 |
| FOXA1(Forkhead)/MCF7-FOXA1-ChIP-Seq(GSE26831)/Homer | 1e-207 | -4.779e+02 | 0.0000 | 371.0 | 47.63% | 3291.8 | 7.06% | motif file (matrix) |
svg |
2 |
| Foxa2(Forkhead)/Liver-Foxa2-ChIP-Seq(GSE25694)/Homer | 1e-206 | -4.764e+02 | 0.0000 | 341.0 | 43.77% | 2623.8 | 5.62% | motif file (matrix) |
svg |
3 |
| FOXA1(Forkhead)/LNCAP-FOXA1-ChIP-Seq(GSE27824)/Homer | 1e-204 | -4.710e+02 | 0.0000 | 400.0 | 51.35% | 4104.7 | 8.80% | motif file (matrix) |
svg |
4 |
| FOXM1(Forkhead)/MCF7-FOXM1-ChIP-Seq(GSE72977)/Homer | 1e-195 | -4.505e+02 | 0.0000 | 365.0 | 46.85% | 3418.4 | 7.33% | motif file (matrix) |
svg |
5 |
| Fox:Ebox(Forkhead,bHLH)/Panc1-Foxa2-ChIP-Seq(GSE47459)/Homer | 1e-178 | -4.102e+02 | 0.0000 | 322.0 | 41.34% | 2792.2 | 5.99% | motif file (matrix) |
svg |
6 |
| Foxa3(Forkhead)/Liver-Foxa3-ChIP-Seq(GSE77670)/Homer | 1e-168 | -3.886e+02 | 0.0000 | 218.0 | 27.98% | 1014.8 | 2.18% | motif file (matrix) |
svg |
7 |
| FoxL2(Forkhead)/Ovary-FoxL2-ChIP-Seq(GSE60858)/Homer | 1e-96 | -2.232e+02 | 0.0000 | 232.0 | 29.78% | 2691.5 | 5.77% | motif file (matrix) |
svg |
8 |
| FOXK2(Forkhead)/U2OS-FOXK2-ChIP-Seq(E-MTAB-2204)/Homer | 1e-92 | -2.131e+02 | 0.0000 | 198.0 | 25.42% | 1973.9 | 4.23% | motif file (matrix) |
svg |
9 |
| FOXK1(Forkhead)/HEK293-FOXK1-ChIP-Seq(GSE51673)/Homer | 1e-90 | -2.079e+02 | 0.0000 | 252.0 | 32.35% | 3480.5 | 7.46% | motif file (matrix) |
svg |
10 |
| Foxo3(Forkhead)/U2OS-Foxo3-ChIP-Seq(E-MTAB-2701)/Homer | 1e-82 | -1.893e+02 | 0.0000 | 211.0 | 27.09% | 2610.3 | 5.60% | motif file (matrix) |
svg |
11 |
| Foxf1(Forkhead)/Lung-Foxf1-ChIP-Seq(GSE77951)/Homer | 1e-79 | -1.832e+02 | 0.0000 | 217.0 | 27.86% | 2870.5 | 6.15% | motif file (matrix) |
svg |
12 |
| FOXP1(Forkhead)/H9-FOXP1-ChIP-Seq(GSE31006)/Homer | 1e-73 | -1.694e+02 | 0.0000 | 152.0 | 19.51% | 1414.6 | 3.03% | motif file (matrix) |
svg |
13 |
| Foxo1(Forkhead)/RAW-Foxo1-ChIP-Seq(Fan_et_al.)/Homer | 1e-52 | -1.220e+02 | 0.0000 | 256.0 | 32.86% | 5524.1 | 11.84% | motif file (matrix) |
svg |
14 |
| HNF4a(NR),DR1/HepG2-HNF4a-ChIP-Seq(GSE25021)/Homer | 1e-33 | -7.705e+01 | 0.0000 | 78.0 | 10.01% | 820.8 | 1.76% | motif file (matrix) |
svg |
15 |
| HNF6(Homeobox)/Liver-Hnf6-ChIP-Seq(ERP000394)/Homer | 1e-17 | -4.124e+01 | 0.0000 | 72.0 | 9.24% | 1280.2 | 2.74% | motif file (matrix) |
svg |
16 |
| Tcf3(HMG)/mES-Tcf3-ChIP-Seq(GSE11724)/Homer | 1e-15 | -3.623e+01 | 0.0000 | 45.0 | 5.78% | 596.5 | 1.28% | motif file (matrix) |
svg |
17 |
| Erra(NR)/HepG2-Erra-ChIP-Seq(GSE31477)/Homer | 1e-15 | -3.468e+01 | 0.0000 | 136.0 | 17.46% | 3948.8 | 8.46% | motif file (matrix) |
svg |
18 |
| CEBP(bZIP)/ThioMac-CEBPb-ChIP-Seq(GSE21512)/Homer | 1e-12 | -2.899e+01 | 0.0000 | 81.0 | 10.40% | 1973.4 | 4.23% | motif file (matrix) |
svg |
19 |
| Atf3(bZIP)/GBM-ATF3-ChIP-Seq(GSE33912)/Homer | 1e-12 | -2.863e+01 | 0.0000 | 64.0 | 8.22% | 1363.1 | 2.92% | motif file (matrix) |
svg |
20 |
| Gata1(Zf)/K562-GATA1-ChIP-Seq(GSE18829)/Homer | 1e-11 | -2.756e+01 | 0.0000 | 61.0 | 7.83% | 1292.0 | 2.77% | motif file (matrix) |
svg |
21 |
| Fra1(bZIP)/BT549-Fra1-ChIP-Seq(GSE46166)/Homer | 1e-11 | -2.652e+01 | 0.0000 | 54.0 | 6.93% | 1083.9 | 2.32% | motif file (matrix) |
svg |
22 |
| Fra2(bZIP)/Striatum-Fra2-ChIP-Seq(GSE43429)/Homer | 1e-11 | -2.616e+01 | 0.0000 | 47.0 | 6.03% | 863.3 | 1.85% | motif file (matrix) |
svg |
23 |
| BATF(bZIP)/Th17-BATF-ChIP-Seq(GSE39756)/Homer | 1e-10 | -2.501e+01 | 0.0000 | 60.0 | 7.70% | 1340.7 | 2.87% | motif file (matrix) |
svg |
24 |
| Gata2(Zf)/K562-GATA2-ChIP-Seq(GSE18829)/Homer | 1e-10 | -2.489e+01 | 0.0000 | 64.0 | 8.22% | 1490.7 | 3.20% | motif file (matrix) |
svg |
25 |
| TCFL2(HMG)/K562-TCF7L2-ChIP-Seq(GSE29196)/Homer | 1e-10 | -2.374e+01 | 0.0000 | 20.0 | 2.57% | 176.8 | 0.38% | motif file (matrix) |
svg |
26 |
| RXR(NR),DR1/3T3L1-RXR-ChIP-Seq(GSE13511)/Homer | 1e-10 | -2.333e+01 | 0.0000 | 70.0 | 8.99% | 1778.4 | 3.81% | motif file (matrix) |
svg |
27 |
| Tcf4(HMG)/Hct116-Tcf4-ChIP-Seq(SRA012054)/Homer | 1e-10 | -2.304e+01 | 0.0000 | 52.0 | 6.68% | 1121.6 | 2.40% | motif file (matrix) |
svg |
28 |
| JunB(bZIP)/DendriticCells-Junb-ChIP-Seq(GSE36099)/Homer | 1e-9 | -2.301e+01 | 0.0000 | 51.0 | 6.55% | 1087.7 | 2.33% | motif file (matrix) |
svg |
29 |
| PPARE(NR),DR1/3T3L1-Pparg-ChIP-Seq(GSE13511)/Homer | 1e-9 | -2.185e+01 | 0.0000 | 63.0 | 8.09% | 1569.3 | 3.36% | motif file (matrix) |
svg |
30 |
| Gata6(Zf)/HUG1N-GATA6-ChIP-Seq(GSE51936)/Homer | 1e-9 | -2.184e+01 | 0.0000 | 79.0 | 10.14% | 2205.6 | 4.73% | motif file (matrix) |
svg |
31 |
| Gata4(Zf)/Heart-Gata4-ChIP-Seq(GSE35151)/Homer | 1e-9 | -2.171e+01 | 0.0000 | 83.0 | 10.65% | 2377.6 | 5.10% | motif file (matrix) |
svg |
32 |
| COUP-TFII(NR)/Artia-Nr2f2-ChIP-Seq(GSE46497)/Homer | 1e-9 | -2.079e+01 | 0.0000 | 97.0 | 12.45% | 3026.9 | 6.49% | motif file (matrix) |
svg |
33 |
| Cux2(Homeobox)/Liver-Cux2-ChIP-Seq(GSE35985)/Homer | 1e-8 | -2.050e+01 | 0.0000 | 47.0 | 6.03% | 1028.8 | 2.21% | motif file (matrix) |
svg |
34 |
| AP-1(bZIP)/ThioMac-PU.1-ChIP-Seq(GSE21512)/Homer | 1e-8 | -1.923e+01 | 0.0000 | 58.0 | 7.45% | 1485.4 | 3.18% | motif file (matrix) |
svg |
35 |
| GATA3(Zf)/iTreg-Gata3-ChIP-Seq(GSE20898)/Homer | 1e-8 | -1.915e+01 | 0.0000 | 111.0 | 14.25% | 3761.7 | 8.06% | motif file (matrix) |
svg |
36 |
| THRb(NR)/Liver-NR1A2-ChIP-Seq(GSE52613)/Homer | 1e-8 | -1.859e+01 | 0.0000 | 214.0 | 27.47% | 8906.9 | 19.09% | motif file (matrix) |
svg |
37 |
| HNF1b(Homeobox)/PDAC-HNF1B-ChIP-Seq(GSE64557)/Homer | 1e-8 | -1.857e+01 | 0.0000 | 26.0 | 3.34% | 399.5 | 0.86% | motif file (matrix) |
svg |
38 |
| NF1:FOXA1(CTF,Forkhead)/LNCAP-FOXA1-ChIP-Seq(GSE27824)/Homer | 1e-7 | -1.826e+01 | 0.0000 | 16.0 | 2.05% | 152.6 | 0.33% | motif file (matrix) |
svg |
39 |
| Esrrb(NR)/mES-Esrrb-ChIP-Seq(GSE11431)/Homer | 1e-7 | -1.757e+01 | 0.0000 | 48.0 | 6.16% | 1170.4 | 2.51% | motif file (matrix) |
svg |
40 |
| Hnf1(Homeobox)/Liver-Foxa2-Chip-Seq(GSE25694)/Homer | 1e-7 | -1.717e+01 | 0.0000 | 25.0 | 3.21% | 399.2 | 0.86% | motif file (matrix) |
svg |
41 |
| Nr5a2(NR)/Pancreas-LRH1-ChIP-Seq(GSE34295)/Homer | 1e-7 | -1.717e+01 | 0.0000 | 49.0 | 6.29% | 1224.8 | 2.63% | motif file (matrix) |
svg |
42 |
| Fosl2(bZIP)/3T3L1-Fosl2-ChIP-Seq(GSE56872)/Homer | 1e-7 | -1.637e+01 | 0.0000 | 30.0 | 3.85% | 573.1 | 1.23% | motif file (matrix) |
svg |
43 |
| TR4(NR),DR1/Hela-TR4-ChIP-Seq(GSE24685)/Homer | 1e-6 | -1.490e+01 | 0.0000 | 14.0 | 1.80% | 148.4 | 0.32% | motif file (matrix) |
svg |
44 |
| HLF(bZIP)/HSC-HLF.Flag-ChIP-Seq(GSE69817)/Homer | 1e-5 | -1.316e+01 | 0.0000 | 73.0 | 9.37% | 2451.7 | 5.26% | motif file (matrix) |
svg |
45 |
| SF1(NR)/H295R-Nr5a1-ChIP-Seq(GSE44220)/Homer | 1e-5 | -1.300e+01 | 0.0000 | 33.0 | 4.24% | 786.1 | 1.69% | motif file (matrix) |
svg |
46 |
| Nr5a2(NR)/mES-Nr5a2-ChIP-Seq(GSE19019)/Homer | 1e-5 | -1.152e+01 | 0.0001 | 33.0 | 4.24% | 845.4 | 1.81% | motif file (matrix) |
svg |
47 |
| Jun-AP1(bZIP)/K562-cJun-ChIP-Seq(GSE31477)/Homer | 1e-5 | -1.152e+01 | 0.0001 | 21.0 | 2.70% | 412.4 | 0.88% | motif file (matrix) |
svg |
48 |
| NeuroD1(bHLH)/Islet-NeuroD1-ChIP-Seq(GSE30298)/Homer | 1e-4 | -1.074e+01 | 0.0002 | 46.0 | 5.91% | 1416.8 | 3.04% | motif file (matrix) |
svg |
49 |
| Bach2(bZIP)/OCILy7-Bach2-ChIP-Seq(GSE44420)/Homer | 1e-4 | -9.655e+00 | 0.0005 | 17.0 | 2.18% | 332.1 | 0.71% | motif file (matrix) |
svg |
50 |
| CTCF(Zf)/CD4+-CTCF-ChIP-Seq(Barski_et_al.)/Homer | 1e-3 | -8.930e+00 | 0.0010 | 9.0 | 1.16% | 111.1 | 0.24% | motif file (matrix) |
svg |
51 |
| Nur77(NR)/K562-NR4A1-ChIP-Seq(GSE31363)/Homer | 1e-3 | -8.145e+00 | 0.0021 | 18.0 | 2.31% | 414.8 | 0.89% | motif file (matrix) |
svg |
52 |
| Sox3(HMG)/NPC-Sox3-ChIP-Seq(GSE33059)/Homer | 1e-3 | -7.462e+00 | 0.0040 | 118.0 | 15.15% | 5249.8 | 11.25% | motif file (matrix) |
svg |
53 |
| NF1(CTF)/LNCAP-NF1-ChIP-Seq(Unpublished)/Homer | 1e-3 | -7.440e+00 | 0.0040 | 19.0 | 2.44% | 478.7 | 1.03% | motif file (matrix) |
svg |
54 |
| Atf1(bZIP)/K562-ATF1-ChIP-Seq(GSE31477)/Homer | 1e-3 | -7.287e+00 | 0.0046 | 38.0 | 4.88% | 1288.9 | 2.76% | motif file (matrix) |
svg |
55 |
| BORIS(Zf)/K562-CTCFL-ChIP-Seq(GSE32465)/Homer | 1e-3 | -7.261e+00 | 0.0047 | 8.0 | 1.03% | 112.3 | 0.24% | motif file (matrix) |
svg |
56 |
| NeuroG2(bHLH)/Fibroblast-NeuroG2-ChIP-Seq(GSE75910)/Homer | 1e-3 | -7.145e+00 | 0.0051 | 76.0 | 9.76% | 3127.3 | 6.70% | motif file (matrix) |
svg |
57 |
| Atf4(bZIP)/MEF-Atf4-ChIP-Seq(GSE35681)/Homer | 1e-2 | -6.778e+00 | 0.0073 | 23.0 | 2.95% | 668.3 | 1.43% | motif file (matrix) |
svg |
58 |
| Sox4(HMG)/proB-Sox4-ChIP-Seq(GSE50066)/Homer | 1e-2 | -6.681e+00 | 0.0079 | 55.0 | 7.06% | 2138.0 | 4.58% | motif file (matrix) |
svg |
59 |
| GATA:SCL(Zf,bHLH)/Ter119-SCL-ChIP-Seq(GSE18720)/Homer | 1e-2 | -6.663e+00 | 0.0079 | 10.0 | 1.28% | 184.2 | 0.39% | motif file (matrix) |
svg |
60 |
| Tcf21(bHLH)/ArterySmoothMuscle-Tcf21-ChIP-Seq(GSE61369)/Homer | 1e-2 | -6.304e+00 | 0.0111 | 49.0 | 6.29% | 1884.2 | 4.04% | motif file (matrix) |
svg |
61 |
| Nkx3.1(Homeobox)/LNCaP-Nkx3.1-ChIP-Seq(GSE28264)/Homer | 1e-2 | -6.154e+00 | 0.0127 | 124.0 | 15.92% | 5771.2 | 12.37% | motif file (matrix) |
svg |
62 |
| Atoh1(bHLH)/Cerebellum-Atoh1-ChIP-Seq(GSE22111)/Homer | 1e-2 | -6.026e+00 | 0.0142 | 49.0 | 6.29% | 1911.8 | 4.10% | motif file (matrix) |
svg |
63 |
| EWS:FLI1-fusion(ETS)/SK_N_MC-EWS:FLI1-ChIP-Seq(SRA014231)/Homer | 1e-2 | -6.016e+00 | 0.0142 | 30.0 | 3.85% | 1018.6 | 2.18% | motif file (matrix) |
svg |
64 |
| Elk1(ETS)/Hela-Elk1-ChIP-Seq(GSE31477)/Homer | 1e-2 | -6.000e+00 | 0.0142 | 23.0 | 2.95% | 711.7 | 1.53% | motif file (matrix) |
svg |
65 |
| Tlx?(NR)/NPC-H3K4me1-ChIP-Seq(GSE16256)/Homer | 1e-2 | -5.905e+00 | 0.0153 | 19.0 | 2.44% | 548.7 | 1.18% | motif file (matrix) |
svg |
66 |
| CRX(Homeobox)/Retina-Crx-ChIP-Seq(GSE20012)/Homer | 1e-2 | -5.805e+00 | 0.0166 | 123.0 | 15.79% | 5777.1 | 12.38% | motif file (matrix) |
svg |
67 |
| CEBP:AP1(bZIP)/ThioMac-CEBPb-ChIP-Seq(GSE21512)/Homer | 1e-2 | -5.659e+00 | 0.0189 | 55.0 | 7.06% | 2245.8 | 4.81% | motif file (matrix) |
svg |
68 |
| Elk4(ETS)/Hela-Elk4-ChIP-Seq(GSE31477)/Homer | 1e-2 | -5.553e+00 | 0.0208 | 24.0 | 3.08% | 782.0 | 1.68% | motif file (matrix) |
svg |
69 |
| Sox9(HMG)/Limb-SOX9-ChIP-Seq(GSE73225)/Homer | 1e-2 | -5.351e+00 | 0.0250 | 52.0 | 6.68% | 2130.3 | 4.57% | motif file (matrix) |
svg |
70 |
| Sox2(HMG)/mES-Sox2-ChIP-Seq(GSE11431)/Homer | 1e-2 | -5.328e+00 | 0.0252 | 58.0 | 7.45% | 2434.0 | 5.22% | motif file (matrix) |
svg |
71 |
| Ap4(bHLH)/AML-Tfap4-ChIP-Seq(GSE45738)/Homer | 1e-2 | -5.295e+00 | 0.0257 | 58.0 | 7.45% | 2438.8 | 5.23% | motif file (matrix) |
svg |
72 |
| Six1(Homeobox)/Myoblast-Six1-ChIP-Chip(GSE20150)/Homer | 1e-2 | -5.290e+00 | 0.0257 | 17.0 | 2.18% | 497.5 | 1.07% | motif file (matrix) |
svg |
73 |
| Olig2(bHLH)/Neuron-Olig2-ChIP-Seq(GSE30882)/Homer | 1e-2 | -5.285e+00 | 0.0257 | 94.0 | 12.07% | 4311.5 | 9.24% | motif file (matrix) |
svg |
74 |
| EWS:ERG-fusion(ETS)/CADO_ES1-EWS:ERG-ChIP-Seq(SRA014231)/Homer | 1e-2 | -5.208e+00 | 0.0269 | 39.0 | 5.01% | 1506.8 | 3.23% | motif file (matrix) |
svg |
75 |
| TEAD(TEA)/Fibroblast-PU.1-ChIP-Seq(Unpublished)/Homer | 1e-2 | -5.142e+00 | 0.0284 | 38.0 | 4.88% | 1464.7 | 3.14% | motif file (matrix) |
svg |
76 |
| GSC(Homeobox)/FrogEmbryos-GSC-ChIP-Seq(DRA000576)/Homer | 1e-2 | -4.999e+00 | 0.0323 | 61.0 | 7.83% | 2628.6 | 5.63% | motif file (matrix) |
svg |
77 |
| FOXA1:AR(Forkhead,NR)/LNCAP-AR-ChIP-Seq(GSE27824)/Homer | 1e-2 | -4.950e+00 | 0.0335 | 9.0 | 1.16% | 199.9 | 0.43% | motif file (matrix) |
svg |
78 |
| Ptf1a(bHLH)/Panc1-Ptf1a-ChIP-Seq(GSE47459)/Homer | 1e-2 | -4.933e+00 | 0.0336 | 114.0 | 14.63% | 5447.1 | 11.68% | motif file (matrix) |
svg |
79 |
| TEAD4(TEA)/Tropoblast-Tead4-ChIP-Seq(GSE37350)/Homer | 1e-2 | -4.872e+00 | 0.0353 | 41.0 | 5.26% | 1637.4 | 3.51% | motif file (matrix) |
svg |
80 |
| c-Jun-CRE(bZIP)/K562-cJun-ChIP-Seq(GSE31477)/Homer | 1e-2 | -4.823e+00 | 0.0366 | 16.0 | 2.05% | 480.8 | 1.03% | motif file (matrix) |
svg |
81 |
| ETS(ETS)/Promoter/Homer | 1e-2 | -4.740e+00 | 0.0393 | 14.0 | 1.80% | 401.5 | 0.86% | motif file (matrix) |
svg |
82 |
| Foxh1(Forkhead)/hESC-FOXH1-ChIP-Seq(GSE29422)/Homer | 1e-2 | -4.609e+00 | 0.0442 | 41.0 | 5.26% | 1665.4 | 3.57% | motif file (matrix) |
svg |