Homer de novo Motif Results (hs_Embryonic_HUES64_normal_OTX2_SRX702045_homermotifs_10_13_16/)

Known Motif Enrichment Results
Gene Ontology Enrichment Results
If Homer is having trouble matching a motif to a known motif, try copy/pasting the matrix file into STAMP
More information on motif finding results: HOMER | Description of Results | Tips
Total target sequences = 786
Total background sequences = 47315
* - possible false positive
RankMotifP-valuelog P-pvalue% of Targets% of Background STD(Bg STD) Best Match/DetailsMotif File
1 G C T A A T C G G A T C C G A T C G T A C G T A A C G T A G T C G A T C G A T C G A C T A C G T A G C T 1e-123-2.840e+0229.13%4.10%22.2bp (31.9bp)Otx2(Homeobox)/EpiLC-Otx2-ChIP-Seq(GSE56098)/Homer(0.959)
More Information | Similar Motifs Found		motif file (matrix)
2 A G T C A C T G A G T C A T G C G T A C G A C T T A G C A G C T C T G A T A C G C A G T A C T G C T A G 1e-27-6.326e+014.33%0.29%25.2bp (28.3bp)BORIS(Zf)/K562-CTCFL-ChIP-Seq(GSE32465)/Homer(0.904)
More Information | Similar Motifs Found		motif file (matrix)
3 T C G A C T G A T A G C C G T A A T G C C G T A C G T A C G A T C T A G T A C G 1e-17-4.067e+0111.07%3.81%28.7bp (29.4bp)Sox6/MA0515.1/Jaspar(0.938)
More Information | Similar Motifs Found		motif file (matrix)
4 G C T A A G C T A G T C A C G T C T G A A G T C G C T A A G C T G A C T G C A T A G T C C G T A T C G A 1e-15-3.655e+012.42%0.16%23.7bp (30.4bp)Pou5f1::Sox2/MA0142.1/Jaspar(0.763)
More Information | Similar Motifs Found		motif file (matrix)
5 G C T A C G T A A G T C G T C A T C G A T C G A A C T G G A T C T C A G C T A G 1e-15-3.570e+015.22%1.07%28.1bp (29.8bp)TCF7L2/MA0523.1/Jaspar(0.766)
More Information | Similar Motifs Found		motif file (matrix)
6 A C G T A G T C A G T C A G T C C G A T A C T G A G T C G C A T A C T G C T A G A T C G T A G C A C T G 1e-15-3.524e+015.09%1.03%23.7bp (30.3bp)Zic3(Zf)/mES-Zic3-ChIP-Seq(GSE37889)/Homer(0.877)
More Information | Similar Motifs Found		motif file (matrix)
7 C G T A C G A T C G T A C G T A C A G T A G T C C G A T A G T C G C A T C T A G T A G C C G T A C A T G 1e-14-3.421e+011.53%0.04%25.2bp (25.6bp)Gfi1b(Zf)/HPC7-Gfi1b-ChIP-Seq(GSE22178)/Homer(0.757)
More Information | Similar Motifs Found		motif file (matrix)
8 G A C T C A G T C A T G A C G T T A C G C G T A A C T G C G A T C T A G C G A T A T C G C T G A G C T A C T G A A C T G C T G A 1e-13-3.063e+011.02%0.01%29.6bp (21.0bp)Tbet(T-box)/CD8-Tbet-ChIP-Seq(GSE33802)/Homer(0.625)
More Information | Similar Motifs Found		motif file (matrix)
9 C G T A A C G T C G A T A T G C C G T A G T C A G T C A C A T G A T C G G T A C C G T A T A C G C T G A A T C G C G A T C A T G 1e-12-2.832e+011.15%0.02%31.6bp (24.8bp)LIN54/MA0619.1/Jaspar(0.650)
More Information | Similar Motifs Found		motif file (matrix)
10 * A T C G C T A G C T A G A C T G C T G A G A C T A C G T A C G T T G C A G A C T G A T C A T G C A G C T A C G T G A T C G C T A 1e-11-2.759e+010.89%0.01%29.3bp (8.6bp)NFkB-p50,p52(RHD)/Monocyte-p50-ChIP-Chip(Schreiber_et_al.)/Homer(0.566)
More Information | Similar Motifs Found		motif file (matrix)
11 * A C G T C G T A A C G T A G T C C G A T A G T C A G C T G T A C C G T A C G T A A T G C C G T A G T A C 1e-11-2.706e+010.76%0.00%12.3bp (11.0bp)Tbx20(T-box)/Heart-Tbx20-ChIP-Seq(GSE29636)/Homer(0.644)
More Information | Similar Motifs Found		motif file (matrix)
12 * A C T G C T A G G T A C G T C A C G T A C T A G G T A C A C G T A C G T A C G T A C T G A G C T A T G C 1e-11-2.706e+010.76%0.01%23.5bp (12.0bp)Nr2e3/MA0164.1/Jaspar(0.706)
More Information | Similar Motifs Found		motif file (matrix)
13 * T A C G A C G T A G C T A C T G A C G T A T C G A C T G A C T G A C T G A C T G G T C A C T G A C T A G C A T G C A T G G T A C 1e-11-2.706e+010.76%0.01%18.9bp (15.5bp)Zfp281(Zf)/ES-Zfp281-ChIP-Seq(GSE81042)/Homer(0.774)
More Information | Similar Motifs Found		motif file (matrix)
14 * C G T A C G T A C G T A C G T A A G C T C G T A C T A G C T A G G A C T A G T C A G C T A C T G C T A G 1e-10-2.441e+011.02%0.02%22.6bp (27.9bp)Hand1::Tcf3/MA0092.1/Jaspar(0.610)
More Information | Similar Motifs Found		motif file (matrix)
15 * A G T C T G A C G T A C A G T C C G A T A C T G A G T C C T G A A C T G G T A C A C G T A G C T C G T A 1e-10-2.324e+011.27%0.06%26.5bp (27.5bp)Slug(Zf)/Mesoderm-Snai2-ChIP-Seq(GSE61475)/Homer(0.672)
More Information | Similar Motifs Found		motif file (matrix)
16 * A G T C A C G T A C G T A C G T A C T G C T G A G T C A A C G T A C T G C G T A A T C G G T A C G T C A 1e-9-2.199e+010.89%0.02%22.5bp (33.7bp)Bach2(bZIP)/OCILy7-Bach2-ChIP-Seq(GSE44420)/Homer(0.618)
More Information | Similar Motifs Found		motif file (matrix)
17 * C G T A A G T C C G T A G T C A A C G T A C T G C G T A A T C G A G T C A G T C G C T A A C G T A G T C 1e-9-2.185e+010.64%0.01%24.7bp (21.5bp)Sox17/MA0078.1/Jaspar(0.663)
More Information | Similar Motifs Found		motif file (matrix)
18 * C G T A C G A T A C T G C G T A A T C G A C G T A G C T A G T C C G T A A C T G A C T G A T G C C G T A 1e-9-2.160e+010.76%0.01%21.6bp (27.9bp)JUND(var.2)/MA0492.1/Jaspar(0.564)
More Information | Similar Motifs Found		motif file (matrix)
19 * A C G T A C T G A G T C A C G T A C G T G T C A C G T A A C G T A G T C A C G T A C T G T A G C A C G T 1e-9-2.127e+010.89%0.02%19.4bp (18.2bp)MafK(bZIP)/C2C12-MafK-ChIP-Seq(GSE36030)/Homer(0.651)
More Information | Similar Motifs Found		motif file (matrix)
20 * C G T A A C G T A T C G G A T C G C T A C G T A G T C A A G C T A G C T T C G A 1e-8-2.013e+012.80%0.56%24.9bp (32.4bp)PH0144.1_Pou2f2/Jaspar(0.907)
More Information | Similar Motifs Found		motif file (matrix)
21 * A T C G A G T C A C G T A C T G C A G T A C T G A C G T A C G T A C T G A C G T A C T G C G T A A G C T 1e-8-1.959e+010.51%0.00%17.1bp (16.1bp)PB0121.1_Foxj3_2/Jaspar(0.672)
More Information | Similar Motifs Found		motif file (matrix)
22 * C T A G C T A G T G A C T A C G G C T A A C G T T C G A T C G A G A C T C T A G 1e-8-1.876e+012.42%0.45%22.3bp (28.3bp)POL002.1_INR/Jaspar(0.658)
More Information | Similar Motifs Found		motif file (matrix)
23 * C A T G C A G T G C T A T C G A C A T G A C G T T C G A A T G C G A C T G C A T 1e-6-1.391e+015.34%2.32%22.5bp (29.0bp)PH0117.1_Nkx3-1/Jaspar(0.855)
More Information | Similar Motifs Found		motif file (matrix)
24 * A G C T A G C T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A G C T A C G T A C G T 1e-4-1.082e+0122.77%17.00%24.8bp (27.7bp)PB0182.1_Srf_2/Jaspar(0.806)
More Information | Similar Motifs Found		motif file (matrix)