Information for 5-ATAATCTCTGCAG (Motif 7)

C G T A C G A T C G T A C G T A C A G T A G T C C G A T A G T C G C A T C T A G T A G C C G T A C A T G
Reverse Opposite:
G T A C C G A T A T C G A G T C C G T A A C T G C G T A A C T G G C T A C G A T C G A T G C T A A C G T
p-value:1e-14
log p-value:-3.421e+01
Information Content per bp:1.781
Number of Target Sequences with motif12.0
Percentage of Target Sequences with motif1.53%
Number of Background Sequences with motif20.0
Percentage of Background Sequences with motif0.04%
Average Position of motif in Targets48.0 +/- 25.2bp
Average Position of motif in Background39.6 +/- 25.6bp
Strand Bias (log2 ratio + to - strand density)-1.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Gfi1b(Zf)/HPC7-Gfi1b-ChIP-Seq(GSE22178)/Homer

Match Rank:1
Score:0.76
Offset:1
Orientation:forward strand
Alignment:ATAATCTCTGCAG
-AAATCACTGC--
 C G T A C G A T C G T A C G T A C A G T A G T C C G A T A G T C G C A T C T A G T A G C C G T A C A T G
A C G T T G C A C G T A G T C A A G C T A G T C G C T A T A G C C G A T C T A G G A T C A C G T A C G T

Gfi1b/MA0483.1/Jaspar

Match Rank:2
Score:0.75
Offset:1
Orientation:forward strand
Alignment:ATAATCTCTGCAG
-AAATCACAGCA-
 C G T A C G A T C G T A C G T A C A G T A G T C C G A T A G T C G C A T C T A G T A G C C G T A C A T G
A C G T T G C A C G T A C T G A A G C T A G T C G C T A T A G C C G T A C T A G G A T C G C T A A C G T

Gfi1/MA0038.1/Jaspar

Match Rank:3
Score:0.62
Offset:0
Orientation:forward strand
Alignment:ATAATCTCTGCAG
CAAATCACTG---
 C G T A C G A T C G T A C G T A C A G T A G T C C G A T A G T C G C A T C T A G T A G C C G T A C A T G
A G T C T G C A C G T A C G T A C A G T G T A C G C T A T A G C G C A T T A C G A C G T A C G T A C G T

Zic(Zf)/Cerebellum-ZIC1.2-ChIP-Seq(GSE60731)/Homer

Match Rank:4
Score:0.59
Offset:4
Orientation:reverse strand
Alignment:ATAATCTCTGCAG-
----DCTCAGCAGG
 C G T A C G A T C G T A C G T A C A G T A G T C C G A T A G T C G C A T C T A G T A G C C G T A C A T G A C G T
A C G T A C G T A C G T A C G T C A G T G T A C G C A T A G T C G C T A A C T G A G T C C T G A A C T G A C T G

PB0091.1_Zbtb3_1/Jaspar

Match Rank:5
Score:0.58
Offset:0
Orientation:forward strand
Alignment:ATAATCTCTGCAG----
AATCGCACTGCATTCCG
 C G T A C G A T C G T A C G T A C A G T A G T C C G A T A G T C G C A T C T A G T A G C C G T A C A T G A C G T A C G T A C G T A C G T
C T G A C T G A A C G T A T G C A T C G G T A C C T G A A T G C C G A T A C T G A T G C G T C A A G C T A C G T A T G C A T G C A C T G

Unknown-ESC-element(?)/mES-Nanog-ChIP-Seq(GSE11724)/Homer

Match Rank:6
Score:0.57
Offset:5
Orientation:forward strand
Alignment:ATAATCTCTGCAG----
-----CACAGCAGGGGG
 C G T A C G A T C G T A C G T A C A G T A G T C C G A T A G T C G C A T C T A G T A G C C G T A C A T G A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T T G A C G C T A T G A C C G T A T C A G G A T C C G T A C A T G C A T G C T A G C T A G C T A G

Zic3(Zf)/mES-Zic3-ChIP-Seq(GSE37889)/Homer

Match Rank:7
Score:0.56
Offset:4
Orientation:reverse strand
Alignment:ATAATCTCTGCAG------
----DCHCAGCAGGRGGCC
 C G T A C G A T C G T A C G T A C A G T A G T C C G A T A G T C G C A T C T A G T A G C C G T A C A T G A C G T A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T C A T G T G A C G T C A A T G C G C T A T A C G A G T C C T G A C A T G A T C G C T A G C T A G A T C G A T G C G T A C

GSC(Homeobox)/FrogEmbryos-GSC-ChIP-Seq(DRA000576)/Homer

Match Rank:8
Score:0.56
Offset:0
Orientation:reverse strand
Alignment:ATAATCTCTGCAG
YTAATCCY-----
 C G T A C G A T C G T A C G T A C A G T A G T C C G A T A G T C G C A T C T A G T A G C C G T A C A T G
G A T C G C A T C G T A C G T A A C G T G A T C G A T C A G T C A C G T A C G T A C G T A C G T A C G T

PB0185.1_Tcf1_2/Jaspar

Match Rank:9
Score:0.56
Offset:-1
Orientation:reverse strand
Alignment:-ATAATCTCTGCAG
NNTAATCCNGNCNN
 A C G T C G T A C G A T C G T A C G T A C A G T A G T C C G A T A G T C G C A T C T A G T A G C C G T A C A T G
G A T C G T A C G C A T T G C A G T C A G A C T G T A C A G T C T C A G A T C G C T A G A G T C T G C A C G T A

PB0205.1_Zic1_2/Jaspar

Match Rank:10
Score:0.56
Offset:2
Orientation:forward strand
Alignment:ATAATCTCTGCAG----
--CCACACAGCAGGAGA
 C G T A C G A T C G T A C G T A C A G T A G T C C G A T A G T C G C A T C T A G T A G C C G T A C A T G A C G T A C G T A C G T A C G T
A C G T A C G T A G T C G T A C C G T A T G A C T C G A A G T C G C T A C T A G A G T C C T G A A C T G A C T G G T C A T C A G C G T A