Information for 12-AWGAGTTYAKGSA (Motif 18)

C G T A C G A T A C T G C G T A A T C G A C G T A G C T A G T C C G T A A C T G A C T G A T G C C G T A
Reverse Opposite:
A C G T A T C G A G T C G T A C A C G T T C A G C T G A C G T A A T G C A C G T A G T C C G T A A C G T
p-value:1e-9
log p-value:-2.160e+01
Information Content per bp:1.871
Number of Target Sequences with motif6.0
Percentage of Target Sequences with motif0.76%
Number of Background Sequences with motif5.4
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets46.7 +/- 21.6bp
Average Position of motif in Background37.9 +/- 27.9bp
Strand Bias (log2 ratio + to - strand density)2.3
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

JUND(var.2)/MA0492.1/Jaspar

Match Rank:1
Score:0.56
Offset:-4
Orientation:forward strand
Alignment:----AWGAGTTYAKGSA
AAAGATGATGTCATC--
 A C G T A C G T A C G T A C G T C G T A C G A T A C T G C G T A A T C G A C G T A G C T A G T C C G T A A C T G A C T G A T G C C G T A
C G T A C T G A C G T A T C A G T C G A A C G T A C T G C G T A A G C T T C A G A G C T T G A C C G T A A G C T T G A C A C G T A C G T

c-Jun-CRE(bZIP)/K562-cJun-ChIP-Seq(GSE31477)/Homer

Match Rank:2
Score:0.56
Offset:-2
Orientation:reverse strand
Alignment:--AWGAGTTYAKGSA
NGATGACGTCAT---
 A C G T A C G T C G T A C G A T A C T G C G T A A T C G A C G T A G C T A G T C C G T A A C T G A C T G A T G C C G T A
C T A G T C A G T C G A C G A T C A T G C T G A A G T C T C A G G A C T T G A C C G T A A G C T A C G T A C G T A C G T

RAR:RXR(NR),DR5/ES-RAR-ChIP-Seq(GSE56893)/Homer

Match Rank:3
Score:0.55
Offset:3
Orientation:forward strand
Alignment:AWGAGTTYAKGSA--
---AGGTCAAGGTCA
 C G T A C G A T A C T G C G T A A T C G A C G T A G C T A G T C C G T A A C T G A C T G A T G C C G T A A C G T A C G T
A C G T A C G T A C G T T C G A A C T G C A T G A G C T A G T C C G T A C T G A C T A G A C T G C G A T A T G C C T G A

JUN/MA0488.1/Jaspar

Match Rank:4
Score:0.55
Offset:-3
Orientation:forward strand
Alignment:---AWGAGTTYAKGSA
AAGATGATGTCAT---
 A C G T A C G T A C G T C G T A C G A T A C T G C G T A A T C G A C G T A G C T A G T C C G T A A C T G A C T G A T G C C G T A
C G T A C G T A C T A G T C G A A C G T A C T G C G T A A C G T A T C G G A C T G T A C C G T A A G C T A C G T A C G T A C G T

Atf2(bZIP)/3T3L1-Atf2-ChIP-Seq(GSE56872)/Homer

Match Rank:5
Score:0.54
Offset:-2
Orientation:forward strand
Alignment:--AWGAGTTYAKGSA
NRRTGACGTCAT---
 A C G T A C G T C G T A C G A T A C T G C G T A A T C G A C G T A G C T A G T C C G T A A C T G A C T G A T G C C G T A
A T G C T C A G T C G A G C A T A C T G C G T A A G T C T C A G G A C T T G A C C G T A A G C T A C G T A C G T A C G T

THRb(NR)/Liver-NR1A2-ChIP-Seq(GSE52613)/Homer

Match Rank:6
Score:0.54
Offset:1
Orientation:forward strand
Alignment:AWGAGTTYAKGSA
-TRAGGTCA----
 C G T A C G A T A C T G C G T A A T C G A C G T A G C T A G T C C G T A A C T G A C T G A T G C C G T A
A C G T G C A T T C A G C T G A A T C G A C T G C G A T G A T C C T G A A C G T A C G T A C G T A C G T

Vdr/MA0693.1/Jaspar

Match Rank:7
Score:0.54
Offset:2
Orientation:forward strand
Alignment:AWGAGTTYAKGSA-----
--GAGTTCATTGAGTTCA
 C G T A C G A T A C T G C G T A A T C G A C G T A G C T A G T C C G T A A C T G A C T G A T G C C G T A A C G T A C G T A C G T A C G T A C G T
A C G T A C G T T C A G T C G A C A T G A C G T A C G T A G T C C T G A G A C T G A C T T C A G T C G A C T A G A C G T A C G T A G T C C T G A

JunD(bZIP)/K562-JunD-ChIP-Seq/Homer

Match Rank:8
Score:0.53
Offset:-2
Orientation:reverse strand
Alignment:--AWGAGTTYAKGSA
NGATGACGTCAT---
 A C G T A C G T C G T A C G A T A C T G C G T A A T C G A C G T A G C T A G T C C G T A A C T G A C T G A T G C C G T A
A G C T C T A G T C G A A C G T A C T G C T G A A G T C T C A G A G C T G T A C C G T A A G C T A C G T A C G T A C G T

PB0057.1_Rxra_1/Jaspar

Match Rank:9
Score:0.52
Offset:-3
Orientation:reverse strand
Alignment:---AWGAGTTYAKGSA-
NTNNNGGGGTCANGNNN
 A C G T A C G T A C G T C G T A C G A T A C T G C G T A A T C G A C G T A G C T A G T C C G T A A C T G A C T G A T G C C G T A A C G T
T C G A C A G T A G C T C T G A G C T A T C A G C T A G A C T G A C T G A C G T A G T C C T G A G T A C T C A G C G T A T A G C G C T A

COUP-TFII(NR)/Artia-Nr2f2-ChIP-Seq(GSE46497)/Homer

Match Rank:10
Score:0.52
Offset:1
Orientation:forward strand
Alignment:AWGAGTTYAKGSA
-AGRGGTCA----
 C G T A C G A T A C T G C G T A A T C G A C G T A G C T A G T C C G T A A C T G A C T G A T G C C G T A
A C G T T C G A T C A G T C G A A C T G C A T G A C G T A G T C C T G A A C G T A C G T A C G T A C G T