Information for 5-AASACAAWGG (Motif 3)

T C G A C T G A T A G C C G T A A T G C C G T A C G T A C G A T C T A G T A C G
Reverse Opposite:
A T G C G A T C G C T A A C G T C G A T A T C G A C G T A T C G G A C T A G C T
p-value:1e-17
log p-value:-4.067e+01
Information Content per bp:1.713
Number of Target Sequences with motif87.0
Percentage of Target Sequences with motif11.07%
Number of Background Sequences with motif1804.6
Percentage of Background Sequences with motif3.81%
Average Position of motif in Targets49.8 +/- 28.7bp
Average Position of motif in Background49.3 +/- 29.4bp
Strand Bias (log2 ratio + to - strand density)0.0
Multiplicity (# of sites on avg that occur together)1.09
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Sox6/MA0515.1/Jaspar

Match Rank:1
Score:0.94
Offset:0
Orientation:reverse strand
Alignment:AASACAAWGG
AAAACAATGG
 T C G A C T G A T A G C C G T A A T G C C G T A C G T A C G A T C T A G T A C G
T C G A C T G A T C G A C G T A A G T C C G T A C G T A C G A T C T A G T C A G

Sox3/MA0514.1/Jaspar

Match Rank:2
Score:0.92
Offset:0
Orientation:reverse strand
Alignment:AASACAAWGG
AAAACAAAGG
 T C G A C T G A T A G C C G T A A T G C C G T A C G T A C G A T C T A G T A C G
T C G A T C G A T C G A C G T A A T G C C G T A C G T A C G T A C T A G T A C G

Sox3(HMG)/NPC-Sox3-ChIP-Seq(GSE33059)/Homer

Match Rank:3
Score:0.91
Offset:2
Orientation:reverse strand
Alignment:AASACAAWGG
--RACAAWGG
 T C G A C T G A T A G C C G T A A T G C C G T A C G T A C G A T C T A G T A C G
A C G T A C G T T C G A G T C A T G A C C G T A C G T A C G T A C T A G T A C G

Sox2/MA0143.3/Jaspar

Match Rank:4
Score:0.91
Offset:2
Orientation:reverse strand
Alignment:AASACAAWGG
--AACAAAGG
 T C G A C T G A T A G C C G T A A T G C C G T A C G T A C G A T C T A G T A C G
A C G T A C G T T C G A C G T A A G T C C G T A C G T A C G T A A C T G A C T G

Sox15(HMG)/CPA-Sox15-ChIP-Seq(GSE62909)/Homer

Match Rank:5
Score:0.90
Offset:1
Orientation:forward strand
Alignment:AASACAAWGG-
-RAACAATGGN
 T C G A C T G A T A G C C G T A A T G C C G T A C G T A C G A T C T A G T A C G A C G T
A C G T C T G A T C G A C G T A A T G C C G T A C G T A C G A T C T A G T C A G G A T C

Sox10(HMG)/SciaticNerve-Sox3-ChIP-Seq(GSE35132)/Homer

Match Rank:6
Score:0.90
Offset:0
Orientation:reverse strand
Alignment:AASACAAWGG
VRRACAAWGG
 T C G A C T G A T A G C C G T A A T G C C G T A C G T A C G A T C T A G T A C G
T A G C C T A G T C G A C G T A A G T C C G T A C T G A C G T A C T A G T A C G

Sox17(HMG)/Endoderm-Sox17-ChIP-Seq(GSE61475)/Homer

Match Rank:7
Score:0.90
Offset:0
Orientation:reverse strand
Alignment:AASACAAWGG
VRAACAATGG
 T C G A C T G A T A G C C G T A A T G C C G T A C G T A C G A T C T A G T A C G
T G A C C T G A T C G A C G T A T A G C G T C A T C G A G C A T C T A G T A C G

Sox6(HMG)/Myotubes-Sox6-ChIP-Seq(GSE32627)/Homer

Match Rank:8
Score:0.90
Offset:0
Orientation:reverse strand
Alignment:AASACAAWGG
RNAACAATGG
 T C G A C T G A T A G C C G T A A T G C C G T A C G T A C G A T C T A G T A C G
T C G A T C A G T C G A T C G A A T G C C G T A T C G A G C A T C A T G T A C G

PB0168.1_Sox14_2/Jaspar

Match Rank:9
Score:0.89
Offset:-2
Orientation:forward strand
Alignment:--AASACAAWGG---
CTCACACAATGGCGC
 A C G T A C G T T C G A C T G A T A G C C G T A A T G C C G T A C G T A C G A T C T A G T A C G A C G T A C G T A C G T
A G T C A C G T A G T C T C G A T A G C C G T A A T G C G T C A G T C A G C A T C T A G T C A G G T A C A C T G A T G C

SOX10/MA0442.1/Jaspar

Match Rank:10
Score:0.86
Offset:3
Orientation:reverse strand
Alignment:AASACAAWGG
---ACAAAG-
 T C G A C T G A T A G C C G T A A T G C C G T A C G T A C G A T C T A G T A C G
A C G T A C G T A C G T G T C A A T G C C G T A T G C A C G T A C T A G A C G T