Homer de novo Motif Results (hs_EmbryonicKidney_HEK293T_NormalOrCancer_CDK9_SRX367328_homermotifs_10_13_16/)

Known Motif Enrichment Results
Gene Ontology Enrichment Results
If Homer is having trouble matching a motif to a known motif, try copy/pasting the matrix file into STAMP
More information on motif finding results: HOMER | Description of Results | Tips
Total target sequences = 943
Total background sequences = 47169
* - possible false positive
RankMotifP-valuelog P-pvalue% of Targets% of Background STD(Bg STD) Best Match/DetailsMotif File
1 C G T A A C T G A C T G C T G A C G T A G T C A C G T A T A G C A G T C G A C T A C G T A C G T G T A C T A G C A G T C A C G T 1e-15-3.595e+010.74%0.00%23.6bp (0.0bp)PRDM1(Zf)/Hela-PRDM1-ChIP-Seq(GSE31477)/Homer(0.561)
More Information | Similar Motifs Found
motif file (matrix)
2 G T C A C T A G A G T C C G T A A T C G A G T C A G T C C G T A A G T C A G T C C T A G A T C G A G T C A G T C C T G A A G T C 1e-15-3.595e+010.74%0.00%15.0bp (13.6bp)TFAP2A(var.2)/MA0810.1/Jaspar(0.570)
More Information | Similar Motifs Found
motif file (matrix)
3 A C T G A G T C A T G C C T G A G T C A T G C A C T G A A C G T A C T G A C T G G T A C A C T G A C T G G C T A A T C G C G T A 1e-15-3.494e+011.06%0.02%20.7bp (14.6bp)YY1/MA0095.2/Jaspar(0.734)
More Information | Similar Motifs Found
motif file (matrix)
4 * C A T G C A T G A G C T A C G T G A T C G A C T A T C G A G C T A G C T G C A T 1e-11-2.706e+018.80%3.75%26.2bp (30.8bp)FOXP1/MA0481.1/Jaspar(0.706)
More Information | Similar Motifs Found
motif file (matrix)
5 * T A C G C G T A A C G T A C G T T C G A A T C G A C G T A G C T A C G T A C T G A C T G C T A G C T G A 1e-10-2.437e+010.53%0.00%32.3bp (4.8bp)ZNF410/MA0752.1/Jaspar(0.626)
More Information | Similar Motifs Found
motif file (matrix)
6 * A C G T C T G A C G T A A C T G A C G T A G T C A G T C G T A C A C T G A C T G A T G C A T C G C G A T 1e-10-2.437e+010.53%0.00%9.9bp (0.0bp)ISL2/MA0914.1/Jaspar(0.531)
More Information | Similar Motifs Found
motif file (matrix)
7 * A T C G C G T A A T G C G A T C A C T G T G A C C T A G C T G A A C T G G C T A 1e-10-2.341e+016.36%2.46%27.0bp (33.1bp)PB0140.1_Irf6_2/Jaspar(0.768)
More Information | Similar Motifs Found
motif file (matrix)
8 * C T G A A G T C A G T C G T A C A T C G C T G A A C G T A C T G G A C T A G T C 1e-10-2.338e+011.17%0.07%24.1bp (22.0bp)PB0193.1_Tcfe2a_2/Jaspar(0.687)
More Information | Similar Motifs Found
motif file (matrix)
9 * C A T G A C T G A G T C A C G T T C G A A C T G G T C A A C T G C G A T C T A G 1e-9-2.264e+011.91%0.26%28.3bp (27.1bp)Nkx2.1(Homeobox)/LungAC-Nkx2.1-ChIP-Seq(GSE43252)/Homer(0.681)
More Information | Similar Motifs Found
motif file (matrix)
10 * T A C G T G C A T C A G A C T G C T A G T G C A T C G A C T G A G T A C A T G C 1e-9-2.132e+0111.98%6.52%24.0bp (29.6bp)E2F6(E2F)/Hela-E2F6-ChIP-Seq(GSE31477)/Homer(0.725)
More Information | Similar Motifs Found
motif file (matrix)
11 * A C T G A G T C A G T C C G T A C G T A T C A G A G T C A G T C A C G T A C T G A T G C A C T G A G T C 1e-9-2.093e+010.53%0.00%26.2bp (7.8bp)ZNF416(Zf)/HEK293-ZNF416.GFP-ChIP-Seq(GSE58341)/Homer(0.621)
More Information | Similar Motifs Found
motif file (matrix)
12 * A T G C C T A G C G T A A C T G C G T A A C T G A C T G A C T G A G T C A C T G A C T G A G T C A C T G A G T C A T C G A G T C 1e-9-2.093e+010.53%0.00%7.9bp (1.7bp)YY1(Zf)/Promoter/Homer(0.705)
More Information | Similar Motifs Found
motif file (matrix)
13 * C A G T A C G T A G C T G A T C G A C T A G T C A G T C A G C T G T A C T C A G 1e-8-2.069e+014.88%1.74%29.1bp (33.2bp)NFATC2/MA0152.1/Jaspar(0.633)
More Information | Similar Motifs Found
motif file (matrix)
14 * A G T C A C G T C T G A A C T G A G T C A C G T A C G T A C G T C T G A C T G A A C T G C G T A A G T C 1e-8-2.050e+010.64%0.01%10.9bp (11.7bp)PH0065.1_Hoxc10/Jaspar(0.662)
More Information | Similar Motifs Found
motif file (matrix)
15 * G T A C C T G A C A T G C G A T A C G T G T C A G T A C A G C T A G T C A C G T A C G T A T G C A G T C A G T C C G A T A T G C 1e-8-2.050e+010.64%0.01%23.1bp (15.3bp)ZNF189(Zf)/HEK293-ZNF189.GFP-ChIP-Seq(GSE58341)/Homer(0.669)
More Information | Similar Motifs Found
motif file (matrix)
16 * A G C T G T A C T A C G A C T G C G T A C A G T G A T C A C G T A G T C C A G T 1e-8-2.028e+013.08%0.80%23.3bp (30.4bp)PRDM14(Zf)/H1-PRDM14-ChIP-Seq(GSE22767)/Homer(0.650)
More Information | Similar Motifs Found
motif file (matrix)
17 * A G T C G T A C A C G T A C T G A G T C A G T C A G T C A C T G G T A C A G T C 1e-8-2.020e+012.44%0.51%24.3bp (28.9bp)THAP1/MA0597.1/Jaspar(0.724)
More Information | Similar Motifs Found
motif file (matrix)
18 * G T A C C G A T A G T C A C G T A G T C A T C G A C T G A G T C A T G C A G T C A G T C A C T G A G C T 1e-8-2.012e+011.27%0.11%22.8bp (28.3bp)PB0202.1_Zfp410_2/Jaspar(0.661)
More Information | Similar Motifs Found
motif file (matrix)
19 * A G T C A C G T A T C G A G T C A G T C A G T C A G T C G T C A A G T C A C G T A C G T A G T C A C T G 1e-8-1.891e+010.53%0.01%21.1bp (18.5bp)RORgt(NR)/EL4-RORgt.Flag-ChIP-Seq(GSE56019)/Homer(0.620)
More Information | Similar Motifs Found
motif file (matrix)
20 * A C T G A C T G G T C A C A G T C G T A A G T C A G T C C G T A A C T G A G T C A G T C A G T C A G T C 1e-8-1.885e+010.42%0.00%24.0bp (0.0bp)PB0110.1_Bcl6b_2/Jaspar(0.605)
More Information | Similar Motifs Found
motif file (matrix)
21 * C G A T A G T C G T A C C T G A A G T C A T G C T G A C A T G C A C G T A T C G 1e-8-1.871e+012.86%0.75%21.1bp (27.3bp)ZNF354C/MA0130.1/Jaspar(0.751)
More Information | Similar Motifs Found
motif file (matrix)
22 * G T C A T G A C C G T A T C A G G T C A C T G A A G C T G C A T G T A C G T A C C G T A C G T A T A C G 1e-7-1.826e+011.17%0.11%25.2bp (21.9bp)TEAD(TEA)/Fibroblast-PU.1-ChIP-Seq(Unpublished)/Homer(0.722)
More Information | Similar Motifs Found
motif file (matrix)
23 * A C T G A C T G A C G T A C T G A C T G A C G T A C G T A C G T A G T C A C G T A C G T A C G T A C T G A G T C A C G T A C G T 1e-6-1.609e+010.42%0.00%12.9bp (0.0bp)IRF4(IRF)/GM12878-IRF4-ChIP-Seq(GSE32465)/Homer(0.572)
More Information | Similar Motifs Found
motif file (matrix)
24 * A C G T A C T G A G T C A G C T A G T C A G T C A C T G A C T G G T C A A C G T 1e-6-1.570e+012.65%0.76%27.7bp (30.0bp)POL013.1_MED-1/Jaspar(0.748)
More Information | Similar Motifs Found
motif file (matrix)
25 * T C A G A C T G C G T A A C T G A C T G C T G A A T C G C G T A A C T G C G T A C T G A A G T C A C T G A C G T A C T G C G T A 1e-5-1.247e+010.42%0.01%21.2bp (18.2bp)TBX15/MA0803.1/Jaspar(0.593)
More Information | Similar Motifs Found
motif file (matrix)