Information for 10-CCTGCCCGCC (Motif 17)

A G T C G T A C A C G T A C T G A G T C A G T C A G T C A C T G G T A C A G T C
Reverse Opposite:
A C T G C A T G A G T C A C T G A C T G A C T G A G T C C G T A C A T G A C T G
p-value:1e-8
log p-value:-2.020e+01
Information Content per bp:1.937
Number of Target Sequences with motif23.0
Percentage of Target Sequences with motif2.44%
Number of Background Sequences with motif241.4
Percentage of Background Sequences with motif0.51%
Average Position of motif in Targets52.2 +/- 24.3bp
Average Position of motif in Background48.0 +/- 28.9bp
Strand Bias (log2 ratio + to - strand density)1.2
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

THAP1/MA0597.1/Jaspar

Match Rank:1
Score:0.72
Offset:1
Orientation:forward strand
Alignment:CCTGCCCGCC
-CTGCCCGCA
 A G T C G T A C A C G T A C T G A G T C A G T C A G T C A C T G G T A C A G T C
A C G T A G T C G A C T C A T G G A T C G T A C G T A C C A T G A G T C G T C A

E2F1(E2F)/Hela-E2F1-ChIP-Seq(GSE22478)/Homer

Match Rank:2
Score:0.72
Offset:2
Orientation:reverse strand
Alignment:CCTGCCCGCC--
--TTCCCGCCWG
 A G T C G T A C A C G T A C T G A G T C A G T C A G T C A C T G G T A C A G T C A C G T A C G T
A C G T A C G T A G C T A C G T A T G C A T G C A G T C A C T G A G T C A T G C G C T A A T C G

E2F4/MA0470.1/Jaspar

Match Rank:3
Score:0.71
Offset:0
Orientation:reverse strand
Alignment:CCTGCCCGCC-
NNTTCCCGCCC
 A G T C G T A C A C G T A C T G A G T C A G T C A G T C A C T G G T A C A G T C A C G T
A G T C A G T C A G C T A G C T A T G C A T G C A G T C A C T G A T G C A T G C T G A C

E2F3(E2F)/MEF-E2F3-ChIP-Seq(GSE71376)/Homer

Match Rank:4
Score:0.70
Offset:1
Orientation:reverse strand
Alignment:CCTGCCCGCC---
-TTTCCCGCCMAV
 A G T C G T A C A C G T A C T G A G T C A G T C A G T C A C T G G T A C A G T C A C G T A C G T A C G T
A C G T C G A T G A C T A C G T A T G C A T G C A G T C A C T G A T G C T A G C G T A C T G C A T G A C

HIC2/MA0738.1/Jaspar

Match Rank:5
Score:0.70
Offset:1
Orientation:forward strand
Alignment:CCTGCCCGCC
-ATGCCCACC
 A G T C G T A C A C G T A C T G A G T C A G T C A G T C A C T G G T A C A G T C
A C G T T C G A A G C T T C A G T G A C G T A C G T A C T C G A T A G C A G T C

E2F6/MA0471.1/Jaspar

Match Rank:6
Score:0.69
Offset:0
Orientation:reverse strand
Alignment:CCTGCCCGCC-
NCTTCCCGCCC
 A G T C G T A C A C G T A C T G A G T C A G T C A G T C A C T G G T A C A G T C A C G T
A G T C A G T C A G C T A C G T A T G C A G T C A G T C C A T G A G T C A G T C G A T C

PB0164.1_Smad3_2/Jaspar

Match Rank:7
Score:0.69
Offset:-1
Orientation:forward strand
Alignment:-CCTGCCCGCC------
TACGCCCCGCCACTCTG
 A C G T A G T C G T A C A C G T A C T G A G T C A G T C A G T C A C T G G T A C A G T C A C G T A C G T A C G T A C G T A C G T A C G T
C A G T G T C A G T A C A C T G G A T C A G T C T A G C A T G C T A C G A G T C G T A C G T C A G T A C G A C T A G T C G A C T A C T G

E2F6(E2F)/Hela-E2F6-ChIP-Seq(GSE31477)/Homer

Match Rank:8
Score:0.65
Offset:0
Orientation:reverse strand
Alignment:CCTGCCCGCC
NYTTCCCGCC
 A G T C G T A C A C G T A C T G A G T C A G T C A G T C A C T G G T A C A G T C
T A G C A G C T G A C T A G C T A T G C T G A C T A G C C A T G A T G C A T G C

E2F7(E2F)/Hela-E2F7-ChIP-Seq(GSE32673)/Homer

Match Rank:9
Score:0.65
Offset:-1
Orientation:forward strand
Alignment:-CCTGCCCGCC-
VDTTTCCCGCCA
 A C G T A G T C G T A C A C G T A C T G A G T C A G T C A G T C A C T G G T A C A G T C A C G T
T A G C C G A T A C G T A G C T A G C T A G T C A T G C A G T C A C T G A T G C A T G C G C T A

E2F4(E2F)/K562-E2F4-ChIP-Seq(GSE31477)/Homer

Match Rank:10
Score:0.62
Offset:0
Orientation:reverse strand
Alignment:CCTGCCCGCC
DTTTCCCGCC
 A G T C G T A C A C G T A C T G A G T C A G T C A G T C A C T G G T A C A G T C
C T G A G C A T G A C T C A G T A T G C A T G C A T G C A C T G A T G C A T G C