Information for 6-CTRGYTTTRRGAC (Motif 14)

A G T C A C G T C T G A A C T G A G T C A C G T A C G T A C G T C T G A C T G A A C T G C G T A A G T C
Reverse Opposite:
A C T G A C G T A G T C A G C T A G C T G T C A C G T A C G T A C T A G A G T C A G C T C G T A A C T G
p-value:1e-8
log p-value:-2.050e+01
Information Content per bp:1.878
Number of Target Sequences with motif6.0
Percentage of Target Sequences with motif0.64%
Number of Background Sequences with motif5.0
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets44.8 +/- 10.9bp
Average Position of motif in Background18.1 +/- 11.7bp
Strand Bias (log2 ratio + to - strand density)1.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PH0065.1_Hoxc10/Jaspar

Match Rank:1
Score:0.66
Offset:1
Orientation:reverse strand
Alignment:CTRGYTTTRRGAC----
-ANNTTTTACGACNTNN
 A G T C A C G T C T G A A C T G A G T C A C G T A C G T A C G T C T G A C T G A A C T G C G T A A G T C A C G T A C G T A C G T A C G T
A C G T T G C A T A G C C T A G G C A T C A G T C G A T C G A T C G T A A G T C A C T G C T G A A G T C G A C T G C A T G C A T C G T A

PH0047.1_Hoxa11/Jaspar

Match Rank:2
Score:0.66
Offset:1
Orientation:reverse strand
Alignment:CTRGYTTTRRGAC----
-NNGTTTTACGACTTTA
 A G T C A C G T C T G A A C T G A G T C A C G T A C G T A C G T C T G A C T G A A C T G C G T A A G T C A C G T A C G T A C G T A C G T
A C G T G T C A G A C T C T A G C G A T C A G T C G A T C G A T C G T A A G T C C A T G C T G A A G T C G A C T C G A T G A C T C G T A

PH0077.1_Hoxd12/Jaspar

Match Rank:3
Score:0.65
Offset:0
Orientation:reverse strand
Alignment:CTRGYTTTRRGAC----
NNNATTTTACGACNNTN
 A G T C A C G T C T G A A C T G A G T C A C G T A C G T A C G T C T G A C T G A A C T G C G T A A G T C A C G T A C G T A C G T A C G T
G T C A C G T A C T A G C T G A C G A T C G A T C G A T C G A T C G T A A G T C C A T G C T G A A G T C A G T C G A C T C G A T C T A G

HOXD12/MA0873.1/Jaspar

Match Rank:4
Score:0.65
Offset:3
Orientation:reverse strand
Alignment:CTRGYTTTRRGAC-
---NTTTTACGACT
 A G T C A C G T C T G A A C T G A G T C A C G T A C G T A C G T C T G A C T G A A C T G C G T A A G T C A C G T
A C G T A C G T A C G T C A G T C G A T G C A T A G C T G C A T C T G A A G T C A T C G T C G A A G T C A G C T

PH0066.1_Hoxc11/Jaspar

Match Rank:5
Score:0.64
Offset:1
Orientation:reverse strand
Alignment:CTRGYTTTRRGAC----
-NNNTTTTACGACNTTN
 A G T C A C G T C T G A A C T G A G T C A C G T A C G T A C G T C T G A C T G A A C T G C G T A A G T C A C G T A C G T A C G T A C G T
A C G T G T A C G A C T C T G A C G A T C G A T C G A T C G A T C G T A A G T C C A T G C T G A A G T C G A C T C G A T G A C T C T G A

HOXC12/MA0906.1/Jaspar

Match Rank:6
Score:0.64
Offset:3
Orientation:reverse strand
Alignment:CTRGYTTTRRGAC-
---NTTTTACGACC
 A G T C A C G T C T G A A C T G A G T C A C G T A C G T A C G T C T G A C T G A A C T G C G T A A G T C A C G T
A C G T A C G T A C G T C G A T C A G T C G A T G C A T C G A T T C G A A G T C C A T G C T G A A G T C G A T C

PH0076.1_Hoxd11/Jaspar

Match Rank:7
Score:0.63
Offset:0
Orientation:reverse strand
Alignment:CTRGYTTTRRGAC----
ANNATTTTACGACNTNA
 A G T C A C G T C T G A A C T G A G T C A C G T A C G T A C G T C T G A C T G A A C T G C G T A A G T C A C G T A C G T A C G T A C G T
G T C A C T A G C T A G C G T A C G A T C A G T C G A T C G A T C G T A A G T C C A T G C T G A A G T C A G T C G A C T C G A T C T G A

Hoxa11/MA0911.1/Jaspar

Match Rank:8
Score:0.63
Offset:2
Orientation:reverse strand
Alignment:CTRGYTTTRRGAC-
--ANTTTTACGACC
 A G T C A C G T C T G A A C T G A G T C A C G T A C G T A C G T C T G A C T G A A C T G C G T A A G T C A C G T
A C G T A C G T G C T A C G T A C G A T C G A T G C A T G C A T G C T A G A T C C T A G T C G A A G T C G A T C

PH0067.1_Hoxc12/Jaspar

Match Rank:9
Score:0.63
Offset:0
Orientation:reverse strand
Alignment:CTRGYTTTRRGAC----
GNNNTTTTACGACCTNA
 A G T C A C G T C T G A A C T G A G T C A C G T A C G T A C G T C T G A C T G A A C T G C G T A A G T C A C G T A C G T A C G T A C G T
C T A G G C T A T C G A C G T A C G A T C A G T C G A T C G A T C G T A A G T C C A T G C T G A A G T C A G T C A G C T C G T A C T G A

HOXC11/MA0651.1/Jaspar

Match Rank:10
Score:0.63
Offset:3
Orientation:reverse strand
Alignment:CTRGYTTTRRGAC-
---NTTTTACGACC
 A G T C A C G T C T G A A C T G A G T C A C G T A C G T A C G T C T G A C T G A A C T G C G T A A G T C A C G T
A C G T A C G T A C G T C G T A C G A T C A G T C G A T G C A T C G T A A G T C C T A G C T G A A G T C G A T C