Information for 6-GGCTAGAGTG (Motif 9)

C A T G A C T G A G T C A C G T T C G A A C T G G T C A A C T G C G A T C T A G
Reverse Opposite:
A G T C G C T A G T A C A C G T A G T C A G C T T G C A C T A G A G T C G A T C
p-value:1e-9
log p-value:-2.264e+01
Information Content per bp:1.834
Number of Target Sequences with motif18.0
Percentage of Target Sequences with motif1.91%
Number of Background Sequences with motif124.0
Percentage of Background Sequences with motif0.26%
Average Position of motif in Targets53.6 +/- 28.3bp
Average Position of motif in Background49.9 +/- 27.1bp
Strand Bias (log2 ratio + to - strand density)0.3
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Nkx2.1(Homeobox)/LungAC-Nkx2.1-ChIP-Seq(GSE43252)/Homer

Match Rank:1
Score:0.68
Offset:2
Orientation:reverse strand
Alignment:GGCTAGAGTG--
--CTYRAGTGSY
 C A T G A C T G A G T C A C G T T C G A A C T G G T C A A C T G C G A T C T A G A C G T A C G T
A C G T A C G T A T G C G C A T A G C T C T A G C G T A A C T G C G A T C T A G A T G C G A T C

Nkx2.2(Homeobox)/NPC-Nkx2.2-ChIP-Seq(GSE61673)/Homer

Match Rank:2
Score:0.68
Offset:2
Orientation:forward strand
Alignment:GGCTAGAGTG--
--BTBRAGTGSN
 C A T G A C T G A G T C A C G T T C G A A C T G G T C A A C T G C G A T C T A G A C G T A C G T
A C G T A C G T A T G C G A C T A G C T C T A G C G T A C T A G C G A T C T A G A T C G G A T C

Nkx2-5(var.2)/MA0503.1/Jaspar

Match Rank:3
Score:0.68
Offset:2
Orientation:reverse strand
Alignment:GGCTAGAGTG---
--CTTGAGTGGCT
 C A T G A C T G A G T C A C G T T C G A A C T G G T C A A C T G C G A T C T A G A C G T A C G T A C G T
A C G T A C G T A T G C G A C T C A G T C T A G C G T A A C T G C G A T A C T G A T C G G A T C G A C T

Bapx1(Homeobox)/VertebralCol-Bapx1-ChIP-Seq(GSE36672)/Homer

Match Rank:4
Score:0.66
Offset:3
Orientation:forward strand
Alignment:GGCTAGAGTG---
---TTRAGTGSYK
 C A T G A C T G A G T C A C G T T C G A A C T G G T C A A C T G C G A T C T A G A C G T A C G T A C G T
A C G T A C G T A C G T A G C T G A C T C T A G C G T A C A T G C G A T C T A G A T C G G A C T C A G T

Nkx2.5(Homeobox)/HL1-Nkx2.5.biotin-ChIP-Seq(GSE21529)/Homer

Match Rank:5
Score:0.64
Offset:3
Orientation:reverse strand
Alignment:GGCTAGAGTG---
---TTGAGTGSTT
 C A T G A C T G A G T C A C G T T C G A A C T G G T C A A C T G C G A T C T A G A C G T A C G T A C G T
A C G T A C G T A C G T G C A T A C G T C T A G C G T A C A T G C G A T C T A G A T C G G A C T G A C T

NKX2-8/MA0673.1/Jaspar

Match Rank:6
Score:0.60
Offset:2
Orientation:reverse strand
Alignment:GGCTAGAGTG-
--NTCAAGTGG
 C A T G A C T G A G T C A C G T T C G A A C T G G T C A A C T G C G A T C T A G A C G T
A C G T A C G T A G C T C G A T A T G C C T G A C T G A C T A G C A G T C T A G A T C G

PB0051.1_Osr2_1/Jaspar

Match Rank:7
Score:0.58
Offset:-3
Orientation:reverse strand
Alignment:---GGCTAGAGTG---
CNNNGCTACTGTANNN
 A C G T A C G T A C G T C A T G A C T G A G T C A C G T T C G A A C T G G T C A A C T G C G A T C T A G A C G T A C G T A C G T
G A T C C G A T A C G T C G A T T C A G A G T C A G C T G C T A A G T C A G C T C A T G A C G T C G T A A G T C C G T A C G A T

PB0050.1_Osr1_1/Jaspar

Match Rank:8
Score:0.56
Offset:-3
Orientation:reverse strand
Alignment:---GGCTAGAGTG---
TNNTGCTACTGTNNNN
 A C G T A C G T A C G T C A T G A C T G A G T C A C G T T C G A A C T G G T C A A C T G C G A T C T A G A C G T A C G T A C G T
G A C T C G A T A C G T C G A T T C A G A G T C A G C T G C T A A G T C A G C T C T A G A C G T C G T A G C T A C G T A C G A T

POL010.1_DCE_S_III/Jaspar

Match Rank:9
Score:0.56
Offset:0
Orientation:reverse strand
Alignment:GGCTAGAGTG
NGCTN-----
 C A T G A C T G A G T C A C G T T C G A A C T G G T C A A C T G C G A T C T A G
T A C G A C T G A G T C A C G T A T C G A C G T A C G T A C G T A C G T A C G T

SMAD3/MA0795.1/Jaspar

Match Rank:10
Score:0.55
Offset:-1
Orientation:reverse strand
Alignment:-GGCTAGAGTG
TGTCTAGACG-
 A C G T C A T G A C T G A G T C A C G T T C G A A C T G G T C A A C T G C G A T C T A G
C G A T C A T G C A G T T A G C A C G T T C G A A T C G G C T A G A T C C T A G A C G T