Information for 3-GCCAAAATGGCGGAGA (Motif 3)

A C T G A G T C A T G C C T G A G T C A T G C A C T G A A C G T A C T G A C T G G T A C A C T G A C T G G C T A A T C G C G T A
Reverse Opposite:
C G A T A T G C C A G T A G T C A G T C A C T G G T A C A G T C C G T A A G C T A C G T A C G T A G C T A T C G C T A G A G T C
p-value:1e-15
log p-value:-3.494e+01
Information Content per bp:1.907
Number of Target Sequences with motif10.0
Percentage of Target Sequences with motif1.06%
Number of Background Sequences with motif7.3
Percentage of Background Sequences with motif0.02%
Average Position of motif in Targets47.3 +/- 20.7bp
Average Position of motif in Background50.7 +/- 14.6bp
Strand Bias (log2 ratio + to - strand density)0.6
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

YY1/MA0095.2/Jaspar

Match Rank:1
Score:0.73
Offset:2
Orientation:forward strand
Alignment:GCCAAAATGGCGGAGA
--CAAGATGGCGGC--
 A C T G A G T C A T G C C T G A G T C A T G C A C T G A A C G T A C T G A C T G G T A C A C T G A C T G G C T A A T C G C G T A
A C G T A C G T T G A C C T G A T C G A T C A G C G T A A G C T C T A G C T A G G T A C A C T G T C A G G T A C A C G T A C G T

YY1(Zf)/Promoter/Homer

Match Rank:2
Score:0.73
Offset:2
Orientation:forward strand
Alignment:GCCAAAATGGCGGAGA
--CAAGATGGCGGC--
 A C T G A G T C A T G C C T G A G T C A T G C A C T G A A C G T A C T G A C T G G T A C A C T G A C T G G C T A A T C G C G T A
A C G T A C G T T A G C C G T A C T G A T A C G C G T A A C G T A C T G A C T G A G T C T A C G C T A G G T A C A C G T A C G T

YY2/MA0748.1/Jaspar

Match Rank:3
Score:0.71
Offset:4
Orientation:reverse strand
Alignment:GCCAAAATGGCGGAGA
----TAATGGCGGNC-
 A C T G A G T C A T G C C T G A G T C A T G C A C T G A A C G T A C T G A C T G G T A C A C T G A C T G G C T A A T C G C G T A
A C G T A C G T A C G T A C G T G C A T C T G A C G T A G C A T C T A G A C T G A T G C T A C G C T A G G C T A G A T C A C G T

PB0164.1_Smad3_2/Jaspar

Match Rank:4
Score:0.61
Offset:2
Orientation:reverse strand
Alignment:GCCAAAATGGCGGAGA---
--NAGANTGGCGGGGNGNA
 A C T G A G T C A T G C C T G A G T C A T G C A C T G A A C G T A C T G A C T G G T A C A C T G A C T G G C T A A T C G C G T A A C G T A C G T A C G T
A C G T A C G T T G A C C T G A T C A G C T G A C A T G A C G T C A T G T C A G A T G C T A C G A T C G T C A G C T A G T A G C C A T G C A G T G T C A

ZNF675(Zf)/HEK293-ZNF675.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:5
Score:0.55
Offset:-5
Orientation:forward strand
Alignment:-----GCCAAAATGGCGGAGA
ARGAGGMCAAAATGW------
 A C G T A C G T A C G T A C G T A C G T A C T G A G T C A T G C C T G A G T C A T G C A C T G A A C G T A C T G A C T G G T A C A C T G A C T G G C T A A T C G C G T A
T G C A C T A G C T A G C T G A C A T G A C T G T G C A G A T C G T C A T G C A G T C A G T C A A G C T C T A G G C A T A C G T A C G T A C G T A C G T A C G T A C G T

NFIX/MA0671.1/Jaspar

Match Rank:6
Score:0.51
Offset:-3
Orientation:forward strand
Alignment:---GCCAAAATGGCGGAGA
CGTGCCAAG----------
 A C G T A C G T A C G T A C T G A G T C A T G C C T G A G T C A T G C A C T G A A C G T A C T G A C T G G T A C A C T G A C T G G C T A A T C G C G T A
T A G C C A T G G C A T A C T G A T G C A G T C T G C A C T G A T A C G A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

NFIC/MA0161.1/Jaspar

Match Rank:7
Score:0.51
Offset:-1
Orientation:reverse strand
Alignment:-GCCAAAATGGCGGAGA
TGCCAA-----------
 A C G T A C T G A G T C A T G C C T G A G T C A T G C A C T G A A C G T A C T G A C T G G T A C A C T G A C T G G C T A A T C G C G T A
G C A T C A T G G A T C A G T C G T C A C T G A A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

Sp5(Zf)/mES-Sp5.Flag-ChIP-Seq(GSE72989)/Homer

Match Rank:8
Score:0.50
Offset:4
Orientation:forward strand
Alignment:GCCAAAATGGCGGAGA
----RGKGGGCGGAGC
 A C T G A G T C A T G C C T G A G T C A T G C A C T G A A C G T A C T G A C T G G T A C A C T G A C T G G C T A A T C G C G T A
A C G T A C G T A C G T A C G T C T G A T C A G C A G T C T A G A C T G C T A G G A T C A T C G A C T G C T G A T C A G G A T C

PB0108.1_Atf1_2/Jaspar

Match Rank:9
Score:0.50
Offset:4
Orientation:forward strand
Alignment:GCCAAAATGGCGGAGA--
----GAATGACGAATAAC
 A C T G A G T C A T G C C T G A G T C A T G C A C T G A A C G T A C T G A C T G G T A C A C T G A C T G G C T A A T C G C G T A A C G T A C G T
A C G T A C G T A C G T A C G T T A C G C T G A T C G A A C G T C T A G C G T A A G T C C T A G G T C A C T G A A G C T C G T A C G T A G T A C

NFIA/MA0670.1/Jaspar

Match Rank:10
Score:0.50
Offset:-3
Orientation:forward strand
Alignment:---GCCAAAATGGCGGAGA
GGTGCCAAGT---------
 A C G T A C G T A C G T A C T G A G T C A T G C C T G A G T C A T G C A C T G A A C G T A C T G A C T G G T A C A C T G A C T G G C T A A T C G C G T A
T C A G C A T G A C G T A C T G A G T C A G T C C G T A C G T A T C A G C G A T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T