Homer de novo Motif Results (hs_EmbryonicEndoderm_HUES64_normal_TCF4_SRX702128_homermotifs_10_13_16/)

Known Motif Enrichment Results
Gene Ontology Enrichment Results
If Homer is having trouble matching a motif to a known motif, try copy/pasting the matrix file into STAMP
More information on motif finding results: HOMER | Description of Results | Tips
Total target sequences = 836
Total background sequences = 46841
* - possible false positive
RankMotifP-valuelog P-pvalue% of Targets% of Background STD(Bg STD) Best Match/DetailsMotif File
1 C T G A T A C G C G T A G C A T T A G C C G T A T G C A C G T A T C A G T A C G 1e-149-3.434e+0224.16%2.01%22.1bp (32.3bp)Tcf4(HMG)/Hct116-Tcf4-ChIP-Seq(SRA012054)/Homer(0.958)
More Information | Similar Motifs Found
motif file (matrix)
2 T G A C T G C A A G C T A G C T C G A T C T A G G T A C C G T A A G C T C A G T G A C T T A G C C T G A T C G A C T G A A C T G 1e-20-4.797e+012.75%0.15%22.0bp (29.3bp)Pou5f1::Sox2/MA0142.1/Jaspar(0.837)
More Information | Similar Motifs Found
motif file (matrix)
3 G A C T A T G C A G T C G A T C C A T G A T G C A C G T A C T G G A C T T A C G 1e-18-4.372e+0110.53%3.47%28.1bp (28.5bp)PB0207.1_Zic3_2/Jaspar(0.863)
More Information | Similar Motifs Found
motif file (matrix)
4 T C A G C T A G T C A G G C T A C T A G A C T G T C A G C T A G T A C G G T C A T C A G T A C G T A C G 1e-17-4.065e+018.13%2.33%25.7bp (28.1bp)Zfp281(Zf)/ES-Zfp281-ChIP-Seq(GSE81042)/Homer(0.809)
More Information | Similar Motifs Found
motif file (matrix)
5 A C T G C T A G A C G T A T C G A G C T C T A G T C G A T A C G A T C G G C A T A G T C C T G A A T G C 1e-14-3.327e+013.23%0.44%24.6bp (25.2bp)THRb(NR)/Liver-NR1A2-ChIP-Seq(GSE52613)/Homer(0.760)
More Information | Similar Motifs Found
motif file (matrix)
6 C G T A T A C G A C G T C T A G A T C G C G T A C G T A A G C T A C T G G A T C 1e-13-3.082e+016.34%1.87%27.8bp (29.6bp)TEAD3/MA0808.1/Jaspar(0.851)
More Information | Similar Motifs Found
motif file (matrix)
7 G C A T G T C A T C G A C G T A A C T G A C T G T A G C T A C G A G T C A T G C A C T G A G T C A T G C 1e-13-3.046e+011.56%0.07%23.4bp (28.6bp)Sp1(Zf)/Promoter/Homer(0.661)
More Information | Similar Motifs Found
motif file (matrix)
8 * A C G T A C T G A C T G C G T A A C T G A G T C A G T C C G A T A G C T A C G T C G T A A C T G A G C T 1e-10-2.495e+010.60%0.00%14.9bp (0.0bp)ZNF415(Zf)/HEK293-ZNF415.GFP-ChIP-Seq(GSE58341)/Homer(0.621)
More Information | Similar Motifs Found
motif file (matrix)
9 * A T G C A C G T A T C G A T G C A C G T A C G T A T C G G T A C C G T A A T G C G T A C A C T G A G T C A C G T A G T C A C G T 1e-10-2.495e+010.60%0.00%26.6bp (0.0bp)MSC/MA0665.1/Jaspar(0.568)
More Information | Similar Motifs Found
motif file (matrix)
10 * C T G A A C T G A G T C A C G T T A G C G T A C G A T C A G C T C T G A C G T A C T A G T A C G A C T G G T A C G T A C A G T C 1e-10-2.495e+010.60%0.00%20.7bp (0.0bp)Isl1(Homeobox)/Neuron-Isl1-ChIP-Seq(GSE31456)/Homer(0.557)
More Information | Similar Motifs Found
motif file (matrix)
11 * A G C T A G T C A C G T A G T C A G T C A C G T A T G C A C G T A C T G A C T G A C G T A C T G A T G C 1e-10-2.421e+010.72%0.01%18.9bp (17.6bp)PB0089.1_Tcfe2a_1/Jaspar(0.561)
More Information | Similar Motifs Found
motif file (matrix)
12 * G C A T A C T G A C T G A C T G A T G C C G A T A C T G A C T G A C T G A C T G A T G C A G T C A C T G 1e-10-2.322e+010.84%0.02%25.7bp (33.5bp)KLF5/MA0599.1/Jaspar(0.695)
More Information | Similar Motifs Found
motif file (matrix)
13 * A G C T A C G T A C T G C G T A A T C G A G T C A C G T A G T C A G T C A C T G 1e-9-2.203e+011.44%0.11%25.8bp (29.1bp)POL013.1_MED-1/Jaspar(0.734)
More Information | Similar Motifs Found
motif file (matrix)
14 * A G T C C T G A A C T G A C T G C G T A A C T G A C T G C T A G A C G T C G T A C G T A A C G T A C G T 1e-9-2.150e+010.60%0.01%34.9bp (24.3bp)PH0049.1_Hoxa2/Jaspar(0.647)
More Information | Similar Motifs Found
motif file (matrix)
15 * T G A C G A T C T G C A C G T A C A G T T G A C C G T A T A C G G C T A A C T G T A G C G A T C A C G T 1e-9-2.132e+013.95%1.09%26.7bp (30.0bp)NFYA/MA0060.2/Jaspar(0.746)
More Information | Similar Motifs Found
motif file (matrix)
16 * C G A T A G T C A G T C C T G A A G T C A C G T A G T C A C G T G T A C A C T G 1e-8-2.001e+010.96%0.04%27.4bp (25.4bp)PB0140.1_Irf6_2/Jaspar(0.760)
More Information | Similar Motifs Found
motif file (matrix)
17 * C T A G A G T C C G T A G T C A C T G A C T G A C T G A A C T G A G T C A G T C A C T G G T A C A C T G 1e-7-1.709e+010.72%0.02%28.4bp (33.6bp)KLF13/MA0657.1/Jaspar(0.562)
More Information | Similar Motifs Found
motif file (matrix)
18 * A T C G A G T C C G A T A C T G A C T G A C T G A C T G A C T G C G T A A G T C A C G T A C T G A G T C 1e-7-1.696e+010.60%0.01%24.5bp (15.2bp)MZF1/MA0056.1/Jaspar(0.632)
More Information | Similar Motifs Found
motif file (matrix)
19 * A T G C A T G C T G A C T A C G A G C T G T A C A C T G A C T G T G A C A T C G 1e-6-1.588e+014.31%1.58%21.8bp (35.8bp)Egr2(Zf)/Thymocytes-Egr2-ChIP-Seq(GSE34254)/Homer(0.666)
More Information | Similar Motifs Found
motif file (matrix)
20 * C T G A A G T C A G T C A G T C C T A G A C T G A C G T A T G C C G T A A G T C A G T C G T A C T C G A 1e-6-1.494e+010.48%0.01%15.4bp (19.8bp)Reverb(NR),DR2/RAW-Reverba.biotin-ChIP-Seq(GSE45914)/Homer(0.749)
More Information | Similar Motifs Found
motif file (matrix)
21 * A C T G A C T G A G T C A C T G G T A C C T A G A C G T A C T G A G T C G A T C 1e-6-1.419e+011.08%0.11%22.2bp (27.4bp)Hes1/MA1099.1/Jaspar(0.794)
More Information | Similar Motifs Found
motif file (matrix)