Rank | Motif | Name | P-value | log P-pvalue | q-value (Benjamini) | # Target Sequences with Motif | % of Targets Sequences with Motif | # Background Sequences with Motif | % of Background Sequences with Motif | Motif File |
SVG |
1 |
| Tcf4(HMG)/Hct116-Tcf4-ChIP-Seq(SRA012054)/Homer | 1e-133 | -3.079e+02 | 0.0000 | 174.0 | 20.81% | 741.5 | 1.58% | motif file (matrix) |
svg |
2 |
| Tcf3(HMG)/mES-Tcf3-ChIP-Seq(GSE11724)/Homer | 1e-117 | -2.703e+02 | 0.0000 | 133.0 | 15.91% | 420.1 | 0.90% | motif file (matrix) |
svg |
3 |
| TCFL2(HMG)/K562-TCF7L2-ChIP-Seq(GSE29196)/Homer | 1e-66 | -1.525e+02 | 0.0000 | 62.0 | 7.42% | 123.4 | 0.26% | motif file (matrix) |
svg |
4 |
| Sox3(HMG)/NPC-Sox3-ChIP-Seq(GSE33059)/Homer | 1e-25 | -5.803e+01 | 0.0000 | 146.0 | 17.46% | 3146.9 | 6.71% | motif file (matrix) |
svg |
5 |
| Sox10(HMG)/SciaticNerve-Sox3-ChIP-Seq(GSE35132)/Homer | 1e-20 | -4.718e+01 | 0.0000 | 131.0 | 15.67% | 2979.4 | 6.36% | motif file (matrix) |
svg |
6 |
| Sox2(HMG)/mES-Sox2-ChIP-Seq(GSE11431)/Homer | 1e-19 | -4.403e+01 | 0.0000 | 85.0 | 10.17% | 1522.3 | 3.25% | motif file (matrix) |
svg |
7 |
| OCT4-SOX2-TCF-NANOG(POU,Homeobox,HMG)/mES-Oct4-ChIP-Seq(GSE11431)/Homer | 1e-18 | -4.367e+01 | 0.0000 | 26.0 | 3.11% | 121.1 | 0.26% | motif file (matrix) |
svg |
8 |
| Zic3(Zf)/mES-Zic3-ChIP-Seq(GSE37889)/Homer | 1e-16 | -3.734e+01 | 0.0000 | 96.0 | 11.48% | 2079.1 | 4.44% | motif file (matrix) |
svg |
9 |
| Sox4(HMG)/proB-Sox4-ChIP-Seq(GSE50066)/Homer | 1e-15 | -3.525e+01 | 0.0000 | 81.0 | 9.69% | 1636.5 | 3.49% | motif file (matrix) |
svg |
10 |
| Sox17(HMG)/Endoderm-Sox17-ChIP-Seq(GSE61475)/Homer | 1e-14 | -3.407e+01 | 0.0000 | 61.0 | 7.30% | 1036.6 | 2.21% | motif file (matrix) |
svg |
11 |
| Sox6(HMG)/Myotubes-Sox6-ChIP-Seq(GSE32627)/Homer | 1e-14 | -3.367e+01 | 0.0000 | 107.0 | 12.80% | 2610.9 | 5.57% | motif file (matrix) |
svg |
12 |
| Sox15(HMG)/CPA-Sox15-ChIP-Seq(GSE62909)/Homer | 1e-14 | -3.300e+01 | 0.0000 | 81.0 | 9.69% | 1706.7 | 3.64% | motif file (matrix) |
svg |
13 |
| Unknown-ESC-element(?)/mES-Nanog-ChIP-Seq(GSE11724)/Homer | 1e-13 | -3.139e+01 | 0.0000 | 74.0 | 8.85% | 1521.1 | 3.25% | motif file (matrix) |
svg |
14 |
| Zic(Zf)/Cerebellum-ZIC1.2-ChIP-Seq(GSE60731)/Homer | 1e-10 | -2.509e+01 | 0.0000 | 85.0 | 10.17% | 2144.4 | 4.57% | motif file (matrix) |
svg |
15 |
| Sox9(HMG)/Limb-SOX9-ChIP-Seq(GSE73225)/Homer | 1e-8 | -1.859e+01 | 0.0000 | 61.0 | 7.30% | 1525.3 | 3.25% | motif file (matrix) |
svg |
16 |
| Zfp281(Zf)/ES-Zfp281-ChIP-Seq(GSE81042)/Homer | 1e-7 | -1.732e+01 | 0.0000 | 36.0 | 4.31% | 698.8 | 1.49% | motif file (matrix) |
svg |
17 |
| CTCF(Zf)/CD4+-CTCF-ChIP-Seq(Barski_et_al.)/Homer | 1e-6 | -1.560e+01 | 0.0000 | 18.0 | 2.15% | 220.6 | 0.47% | motif file (matrix) |
svg |
18 |
| TEAD4(TEA)/Tropoblast-Tead4-ChIP-Seq(GSE37350)/Homer | 1e-5 | -1.346e+01 | 0.0000 | 53.0 | 6.34% | 1458.9 | 3.11% | motif file (matrix) |
svg |
19 |
| TEAD(TEA)/Fibroblast-PU.1-ChIP-Seq(Unpublished)/Homer | 1e-5 | -1.344e+01 | 0.0000 | 40.0 | 4.78% | 967.6 | 2.06% | motif file (matrix) |
svg |
20 |
| BORIS(Zf)/K562-CTCFL-ChIP-Seq(GSE32465)/Homer | 1e-5 | -1.186e+01 | 0.0001 | 28.0 | 3.35% | 603.7 | 1.29% | motif file (matrix) |
svg |
21 |
| Nanog(Homeobox)/mES-Nanog-ChIP-Seq(GSE11724)/Homer | 1e-4 | -1.052e+01 | 0.0005 | 197.0 | 23.56% | 8419.5 | 17.96% | motif file (matrix) |
svg |
22 |
| TEAD2(TEA)/Py2T-Tead2-ChIP-Seq(GSE55709)/Homer | 1e-4 | -1.029e+01 | 0.0006 | 31.0 | 3.71% | 768.3 | 1.64% | motif file (matrix) |
svg |
23 |
| Maz(Zf)/HepG2-Maz-ChIP-Seq(GSE31477)/Homer | 1e-4 | -1.025e+01 | 0.0006 | 156.0 | 18.66% | 6411.1 | 13.68% | motif file (matrix) |
svg |
24 |
| Nkx6.1(Homeobox)/Islet-Nkx6.1-ChIP-Seq(GSE40975)/Homer | 1e-4 | -1.012e+01 | 0.0006 | 93.0 | 11.12% | 3416.1 | 7.29% | motif file (matrix) |
svg |
25 |
| Atf2(bZIP)/3T3L1-Atf2-ChIP-Seq(GSE56872)/Homer | 1e-4 | -9.715e+00 | 0.0009 | 22.0 | 2.63% | 471.4 | 1.01% | motif file (matrix) |
svg |
26 |
| Atf7(bZIP)/3T3L1-Atf7-ChIP-Seq(GSE56872)/Homer | 1e-4 | -9.537e+00 | 0.0010 | 27.0 | 3.23% | 653.4 | 1.39% | motif file (matrix) |
svg |
27 |
| c-Jun-CRE(bZIP)/K562-cJun-ChIP-Seq(GSE31477)/Homer | 1e-3 | -8.984e+00 | 0.0017 | 19.0 | 2.27% | 394.6 | 0.84% | motif file (matrix) |
svg |
28 |
| HNF4a(NR),DR1/HepG2-HNF4a-ChIP-Seq(GSE25021)/Homer | 1e-3 | -8.191e+00 | 0.0036 | 31.0 | 3.71% | 866.5 | 1.85% | motif file (matrix) |
svg |
29 |
| Gata4(Zf)/Heart-Gata4-ChIP-Seq(GSE35151)/Homer | 1e-3 | -7.788e+00 | 0.0052 | 41.0 | 4.90% | 1298.8 | 2.77% | motif file (matrix) |
svg |
30 |
| Oct6(POU,Homeobox)/NPC-Pou3f1-ChIP-Seq(GSE35496)/Homer | 1e-3 | -7.604e+00 | 0.0060 | 18.0 | 2.15% | 406.8 | 0.87% | motif file (matrix) |
svg |
31 |
| CHR(?)/Hela-CellCycle-Expression/Homer | 1e-3 | -7.287e+00 | 0.0080 | 30.0 | 3.59% | 875.4 | 1.87% | motif file (matrix) |
svg |
32 |
| GABPA(ETS)/Jurkat-GABPa-ChIP-Seq(GSE17954)/Homer | 1e-3 | -7.242e+00 | 0.0081 | 68.0 | 8.13% | 2542.9 | 5.43% | motif file (matrix) |
svg |
33 |
| GFY-Staf(?,Zf)/Promoter/Homer | 1e-2 | -6.616e+00 | 0.0148 | 9.0 | 1.08% | 145.0 | 0.31% | motif file (matrix) |
svg |
34 |
| Etv2(ETS)/ES-ER71-ChIP-Seq(GSE59402)/Homer(0.967) | 1e-2 | -6.482e+00 | 0.0164 | 59.0 | 7.06% | 2202.4 | 4.70% | motif file (matrix) |
svg |
35 |
| FOXM1(Forkhead)/MCF7-FOXM1-ChIP-Seq(GSE72977)/Homer | 1e-2 | -6.393e+00 | 0.0174 | 33.0 | 3.95% | 1055.0 | 2.25% | motif file (matrix) |
svg |
36 |
| Gata6(Zf)/HUG1N-GATA6-ChIP-Seq(GSE51936)/Homer | 1e-2 | -6.323e+00 | 0.0181 | 35.0 | 4.19% | 1144.3 | 2.44% | motif file (matrix) |
svg |
37 |
| Elk1(ETS)/Hela-Elk1-ChIP-Seq(GSE31477)/Homer | 1e-2 | -6.247e+00 | 0.0190 | 56.0 | 6.70% | 2087.1 | 4.45% | motif file (matrix) |
svg |
38 |
| REST-NRSF(Zf)/Jurkat-NRSF-ChIP-Seq/Homer | 1e-2 | -6.231e+00 | 0.0190 | 4.0 | 0.48% | 29.3 | 0.06% | motif file (matrix) |
svg |
39 |
| ETV1(ETS)/GIST48-ETV1-ChIP-Seq(GSE22441)/Homer | 1e-2 | -6.157e+00 | 0.0198 | 91.0 | 10.89% | 3761.8 | 8.03% | motif file (matrix) |
svg |
40 |
| Ronin(THAP)/ES-Thap11-ChIP-Seq(GSE51522)/Homer | 1e-2 | -6.028e+00 | 0.0219 | 7.0 | 0.84% | 100.9 | 0.22% | motif file (matrix) |
svg |
41 |
| Atf1(bZIP)/K562-ATF1-ChIP-Seq(GSE31477)/Homer | 1e-2 | -6.015e+00 | 0.0219 | 31.0 | 3.71% | 995.4 | 2.12% | motif file (matrix) |
svg |
42 |
| Fli1(ETS)/CD8-FLI-ChIP-Seq(GSE20898)/Homer | 1e-2 | -5.696e+00 | 0.0291 | 82.0 | 9.81% | 3384.3 | 7.22% | motif file (matrix) |
svg |
43 |
| Lhx1(Homeobox)/EmbryoCarcinoma-Lhx1-ChIP-Seq(GSE70957)/Homer | 1e-2 | -5.489e+00 | 0.0350 | 36.0 | 4.31% | 1251.8 | 2.67% | motif file (matrix) |
svg |
44 |
| EWS:FLI1-fusion(ETS)/SK_N_MC-EWS:FLI1-ChIP-Seq(SRA014231)/Homer | 1e-2 | -5.440e+00 | 0.0359 | 38.0 | 4.55% | 1344.8 | 2.87% | motif file (matrix) |
svg |
45 |
| Gata2(Zf)/K562-GATA2-ChIP-Seq(GSE18829)/Homer | 1e-2 | -5.368e+00 | 0.0377 | 26.0 | 3.11% | 827.5 | 1.77% | motif file (matrix) |
svg |
46 |
| Isl1(Homeobox)/Neuron-Isl1-ChIP-Seq(GSE31456)/Homer | 1e-2 | -5.270e+00 | 0.0407 | 73.0 | 8.73% | 3003.7 | 6.41% | motif file (matrix) |
svg |
47 |
| Klf9(Zf)/GBM-Klf9-ChIP-Seq(GSE62211)/Homer | 1e-2 | -5.268e+00 | 0.0407 | 37.0 | 4.43% | 1314.2 | 2.80% | motif file (matrix) |
svg |
48 |
| Pit1(Homeobox)/GCrat-Pit1-ChIP-Seq(GSE58009)/Homer | 1e-2 | -5.233e+00 | 0.0407 | 26.0 | 3.11% | 836.4 | 1.78% | motif file (matrix) |
svg |
49 |
| Sp5(Zf)/mES-Sp5.Flag-ChIP-Seq(GSE72989)/Homer | 1e-2 | -5.217e+00 | 0.0407 | 105.0 | 12.56% | 4592.6 | 9.80% | motif file (matrix) |
svg |
50 |
| E-box(bHLH)/Promoter/Homer | 1e-2 | -5.197e+00 | 0.0407 | 9.0 | 1.08% | 179.8 | 0.38% | motif file (matrix) |
svg |
51 |
| Lhx3(Homeobox)/Neuron-Lhx3-ChIP-Seq(GSE31456)/Homer | 1e-2 | -5.189e+00 | 0.0407 | 54.0 | 6.46% | 2104.2 | 4.49% | motif file (matrix) |
svg |
52 |
| FOXA1(Forkhead)/MCF7-FOXA1-ChIP-Seq(GSE26831)/Homer | 1e-2 | -5.128e+00 | 0.0415 | 28.0 | 3.35% | 929.2 | 1.98% | motif file (matrix) |
svg |
53 |
| Lhx2(Homeobox)/HFSC-Lhx2-ChIP-Seq(GSE48068)/Homer | 1e-2 | -5.020e+00 | 0.0454 | 34.0 | 4.07% | 1201.8 | 2.56% | motif file (matrix) |
svg |