Homer de novo Motif Results (hs_EmbryonicEndoderm_HUES64_normal_SOX17_SRX702104_homermotifs_10_13_16/)

Known Motif Enrichment Results
Gene Ontology Enrichment Results
If Homer is having trouble matching a motif to a known motif, try copy/pasting the matrix file into STAMP
More information on motif finding results: HOMER | Description of Results | Tips
Total target sequences = 668
Total background sequences = 47144
* - possible false positive
RankMotifP-valuelog P-pvalue% of Targets% of Background STD(Bg STD) Best Match/DetailsMotif File
1 A G T C G A T C G C T A C G A T C G A T A T C G C G A T A G C T A G T C A C G T 1e-160-3.694e+0243.11%6.26%20.5bp (30.6bp)Sox17(HMG)/Endoderm-Sox17-ChIP-Seq(GSE61475)/Homer(0.988)
More Information | Similar Motifs Found		motif file (matrix)
2 C A G T G C A T C T G A A T G C C G T A A C T G C G T A A C G T C G T A C G T A C A T G T C G A C G T A 1e-120-2.774e+0239.82%7.41%24.6bp (33.0bp)Gata4(Zf)/Heart-Gata4-ChIP-Seq(GSE35151)/Homer(0.973)
More Information | Similar Motifs Found		motif file (matrix)
3 G T A C G T A C G C T A A T C G A G T C C G T A C A T G A C T G C T A G C T A G 1e-29-6.836e+0121.86%7.70%24.1bp (30.9bp)Unknown-ESC-element(?)/mES-Nanog-ChIP-Seq(GSE11724)/Homer(0.908)
More Information | Similar Motifs Found		motif file (matrix)
4 G C T A C T G A C G T A T A G C C G T A A C G T A C T G A C T G A G T C A G T C A C T G G A T C T A G C C A G T A T G C T A C G 1e-15-3.481e+011.65%0.03%18.4bp (18.4bp)YY1/MA0095.2/Jaspar(0.825)
More Information | Similar Motifs Found		motif file (matrix)
5 G C A T T A C G C G T A G A C T T G C A C T A G A T G C G T C A T A C G T A G C C G T A A C G T C G T A 1e-14-3.441e+014.04%0.53%23.8bp (31.8bp)GATA3(Zf)/iTreg-Gata3-ChIP-Seq(GSE20898)/Homer(0.567)
More Information | Similar Motifs Found		motif file (matrix)
6 A G T C G T C A A C T G A C T G C G T A C G T A A C G T A C T G A C G T A C T G C G T A A T C G A T G C 1e-13-3.215e+010.90%0.00%22.2bp (0.0bp)TEAD2(TEA)/Py2T-Tead2-ChIP-Seq(GSE55709)/Homer(0.792)
More Information | Similar Motifs Found		motif file (matrix)
7 A C T G A G T C C G T A A C T G A G T C A C G T A C G T A T C G A G T C C G T A A C T G A C G T A C G T 1e-12-2.801e+010.90%0.01%19.7bp (22.3bp)SCL(bHLH)/HPC7-Scl-ChIP-Seq(GSE13511)/Homer(0.587)
More Information | Similar Motifs Found		motif file (matrix)
8 * C T A G A C T G G C T A C G T A C G A T C G A T C G T A C T G A A G T C A G T C 1e-11-2.731e+011.95%0.11%26.2bp (26.1bp)PH0015.1_Crx/Jaspar(0.741)
More Information | Similar Motifs Found		motif file (matrix)
9 * A T C G C G T A G A C T C G T A G C A T A G T C A C G T T A G C G T C A G A C T C G A T T C A G A G T C 1e-11-2.723e+013.74%0.61%28.0bp (30.3bp)PB0126.1_Gata5_2/Jaspar(0.623)
More Information | Similar Motifs Found		motif file (matrix)
10 * A G T C C G A T A T C G C G T A A C G T C G T A A C T G C T A G A C G T A C T G G T A C A C G T G T C A 1e-11-2.698e+011.35%0.03%26.4bp (34.3bp)Tbx5(T-box)/HL1-Tbx5.biotin-ChIP-Seq(GSE21529)/Homer(0.646)
More Information | Similar Motifs Found		motif file (matrix)
11 * C G T A A C G T G C A T A T C G C G A T A C G T C T G A G T C A A C G T C G A T C G A T A G T C A G T C A C G T A G C T A G C T 1e-11-2.610e+010.75%0.00%28.4bp (24.9bp)SD0003.1_at_AC_acceptor/Jaspar(0.654)
More Information | Similar Motifs Found		motif file (matrix)
12 * A C T G A C T G A G T C A G T C G A C T C T G A C T G A G T A C A G C T A C T G G T A C C T G A C T G A 1e-11-2.589e+011.05%0.01%21.9bp (19.5bp)ZNF711(Zf)/SHSY5Y-ZNF711-ChIP-Seq(GSE20673)/Homer(0.662)
More Information | Similar Motifs Found		motif file (matrix)
13 * C G T A C A T G C G T A C T G A G T C A G T A C T C G A A G T C C G T A A C G T A G T C A C G T A T G C A G T C T A G C T C G A 1e-11-2.589e+011.05%0.01%21.5bp (18.9bp)RUNX-AML(Runt)/CD4+-PolII-ChIP-Seq(Barski_et_al.)/Homer(0.588)
More Information | Similar Motifs Found		motif file (matrix)
14 * T G C A A C G T C A G T T A G C C G T A C G T A C G T A C T A G T A C G G T A C G C T A T A G C C G T A G C A T C A G T A C T G 1e-11-2.559e+010.90%0.01%30.1bp (6.4bp)Tcf3(HMG)/mES-Tcf3-ChIP-Seq(GSE11724)/Homer(0.596)
More Information | Similar Motifs Found		motif file (matrix)
15 * G C T A C G T A A G T C G A T C A C T G A G T C G A C T T A G C C A G T A C T G A C G T A C T G A T C G A G T C A G T C A T G C 1e-10-2.387e+010.90%0.01%21.0bp (4.7bp)MYB(HTH)/ERMYB-Myb-ChIPSeq(GSE22095)/Homer(0.617)
More Information | Similar Motifs Found		motif file (matrix)
16 * G T A C A C G T G T C A A G C T A G T C G C A T C G T A A G T C C G A T C T G A 1e-10-2.338e+011.80%0.12%28.5bp (28.2bp)PB0096.1_Zfp187_1/Jaspar(0.635)
More Information | Similar Motifs Found		motif file (matrix)
17 * A G T C A C G T A C G T C T A G C G A T A C G T C T G A A C G T G C A T A G T C A C G T C G T A C G T A 1e-10-2.308e+011.05%0.02%22.2bp (22.5bp)PB0119.1_Foxa2_2/Jaspar(0.674)
More Information | Similar Motifs Found		motif file (matrix)
18 * A C T G C G T A A C G T G A C T C G T A C G T A C G T A A C T G G T C A A C T G A C T G G A C T A C G T 1e-9-2.287e+011.35%0.05%27.4bp (45.6bp)OTX2/MA0712.1/Jaspar(0.710)
More Information | Similar Motifs Found		motif file (matrix)
19 * C A G T A G T C G T C A G T C A A G T C G A T C T A C G C G T A C A T G C T G A C A G T C T A G T C A G 1e-9-2.263e+011.50%0.08%29.3bp (30.9bp)MF0009.1_TRP(MYB)_class/Jaspar(0.612)
More Information | Similar Motifs Found		motif file (matrix)
20 * G T A C A C G T A C G T C A G T C G T A A G T C C G T A A C T G C G T A A C G T C G T A A G T C A G T C 1e-8-2.063e+010.75%0.01%26.0bp (27.6bp)MEIS2/MA0774.1/Jaspar(0.651)
More Information | Similar Motifs Found		motif file (matrix)
21 * T G C A A C T G A G T C A C G T T A C G A G C T C A T G A C G T A C T G A C G T A T C G A C G T A C G T A C G T C G T A T C G A 1e-8-2.063e+010.75%0.01%28.0bp (8.2bp)PB0016.1_Foxj1_1/Jaspar(0.668)
More Information | Similar Motifs Found		motif file (matrix)
22 * A C G T C G T A A C G T A C G T A C T G A C G T A C G T A C G T A C G T A G T C A G T C A C G T A C G T 1e-8-1.919e+0111.53%5.67%22.7bp (27.1bp)PB0141.1_Isgf3g_2/Jaspar(0.709)
More Information | Similar Motifs Found		motif file (matrix)
23 * A G T C C G T A A G T C C G T A A C G T A G T C A C G T A T G C A C G T A C G T C G T A C G A T A G T C 1e-7-1.720e+010.75%0.01%19.9bp (1.1bp)Myf5(bHLH)/GM-Myf5-ChIP-Seq(GSE24852)/Homer(0.694)
More Information | Similar Motifs Found		motif file (matrix)
24 * A C T G C G T A A G T C A C G T A C T G A G T C C T A G A C T G T C G A A C G T 1e-7-1.676e+011.35%0.10%21.1bp (19.3bp)RUNX2/MA0511.2/Jaspar(0.607)
More Information | Similar Motifs Found		motif file (matrix)
25 * C T G A A C T G C G T A A C G T A C G T A C G T T A G C A G T C G T A C A C G T C A G T A G T C A C G T 1e-7-1.644e+010.75%0.02%8.3bp (32.5bp)POU5F1B/MA0792.1/Jaspar(0.659)
More Information | Similar Motifs Found		motif file (matrix)
26 * C G T A C G T A C T G A A T C G A G T C A C G T A C T G A C T G C G T A A C T G A C G T A T C G A G T C C G T A A C T G A G C T 1e-6-1.585e+010.60%0.01%25.6bp (5.7bp)Nkx2.2(Homeobox)/NPC-Nkx2.2-ChIP-Seq(GSE61673)/Homer(0.578)
More Information | Similar Motifs Found		motif file (matrix)
27 * C G A T A C T G A T C G C A G T C G T A C G A T A T G C A C T G C A G T A G T C 1e-6-1.537e+011.05%0.06%33.7bp (31.7bp)PB0127.1_Gata6_2/Jaspar(0.586)
More Information | Similar Motifs Found		motif file (matrix)
28 * A G T C A T C G A G T C A C T G A C T G C G A T C G T A A G T C C G A T C G T A A T G C A T C G C G T A 1e-6-1.458e+010.45%0.00%28.3bp (11.4bp)Sox4(HMG)/proB-Sox4-ChIP-Seq(GSE50066)/Homer(0.583)
More Information | Similar Motifs Found		motif file (matrix)
29 * C G T A A G T C C G T A C G T A C G T A A G T C C G T A C G T A C G T A C G T A A C T G C G T A C G T A 1e-1-3.936e+001.65%0.80%0.0bp (26.8bp)Sox3/MA0514.1/Jaspar(0.681)
More Information | Similar Motifs Found		motif file (matrix)