Rank | Motif | Name | P-value | log P-pvalue | q-value (Benjamini) | # Target Sequences with Motif | % of Targets Sequences with Motif | # Background Sequences with Motif | % of Background Sequences with Motif | Motif File |
SVG |
1 |
| Sox17(HMG)/Endoderm-Sox17-ChIP-Seq(GSE61475)/Homer | 1e-167 | -3.847e+02 | 0.0000 | 237.0 | 35.48% | 1607.0 | 3.41% | motif file (matrix) |
svg |
2 |
| Sox6(HMG)/Myotubes-Sox6-ChIP-Seq(GSE32627)/Homer | 1e-147 | -3.399e+02 | 0.0000 | 305.0 | 45.66% | 3821.2 | 8.10% | motif file (matrix) |
svg |
3 |
| Sox3(HMG)/NPC-Sox3-ChIP-Seq(GSE33059)/Homer | 1e-140 | -3.246e+02 | 0.0000 | 308.0 | 46.11% | 4141.0 | 8.78% | motif file (matrix) |
svg |
4 |
| Sox2(HMG)/mES-Sox2-ChIP-Seq(GSE11431)/Homer | 1e-137 | -3.158e+02 | 0.0000 | 226.0 | 33.83% | 1937.5 | 4.11% | motif file (matrix) |
svg |
5 |
| Sox15(HMG)/CPA-Sox15-ChIP-Seq(GSE62909)/Homer | 1e-128 | -2.951e+02 | 0.0000 | 236.0 | 35.33% | 2397.2 | 5.08% | motif file (matrix) |
svg |
6 |
| Gata4(Zf)/Heart-Gata4-ChIP-Seq(GSE35151)/Homer | 1e-123 | -2.847e+02 | 0.0000 | 254.0 | 38.02% | 3025.3 | 6.42% | motif file (matrix) |
svg |
7 |
| Sox10(HMG)/SciaticNerve-Sox3-ChIP-Seq(GSE35132)/Homer | 1e-110 | -2.555e+02 | 0.0000 | 265.0 | 39.67% | 3807.0 | 8.07% | motif file (matrix) |
svg |
8 |
| GATA3(Zf)/iTreg-Gata3-ChIP-Seq(GSE20898)/Homer | 1e-109 | -2.528e+02 | 0.0000 | 289.0 | 43.26% | 4694.2 | 9.96% | motif file (matrix) |
svg |
9 |
| Gata6(Zf)/HUG1N-GATA6-ChIP-Seq(GSE51936)/Homer | 1e-106 | -2.453e+02 | 0.0000 | 224.0 | 33.53% | 2682.2 | 5.69% | motif file (matrix) |
svg |
10 |
| Gata2(Zf)/K562-GATA2-ChIP-Seq(GSE18829)/Homer | 1e-102 | -2.356e+02 | 0.0000 | 192.0 | 28.74% | 1935.0 | 4.10% | motif file (matrix) |
svg |
11 |
| Gata1(Zf)/K562-GATA1-ChIP-Seq(GSE18829)/Homer | 1e-96 | -2.225e+02 | 0.0000 | 178.0 | 26.65% | 1732.8 | 3.68% | motif file (matrix) |
svg |
12 |
| Sox4(HMG)/proB-Sox4-ChIP-Seq(GSE50066)/Homer | 1e-82 | -1.896e+02 | 0.0000 | 168.0 | 25.15% | 1861.7 | 3.95% | motif file (matrix) |
svg |
13 |
| Sox9(HMG)/Limb-SOX9-ChIP-Seq(GSE73225)/Homer | 1e-41 | -9.530e+01 | 0.0000 | 119.0 | 17.81% | 1889.5 | 4.01% | motif file (matrix) |
svg |
14 |
| Zic3(Zf)/mES-Zic3-ChIP-Seq(GSE37889)/Homer | 1e-35 | -8.214e+01 | 0.0000 | 83.0 | 12.43% | 1035.5 | 2.20% | motif file (matrix) |
svg |
15 |
| Unknown-ESC-element(?)/mES-Nanog-ChIP-Seq(GSE11724)/Homer | 1e-29 | -6.853e+01 | 0.0000 | 79.0 | 11.83% | 1141.0 | 2.42% | motif file (matrix) |
svg |
16 |
| CRX(Homeobox)/Retina-Crx-ChIP-Seq(GSE20012)/Homer | 1e-23 | -5.400e+01 | 0.0000 | 212.0 | 31.74% | 7513.5 | 15.94% | motif file (matrix) |
svg |
17 |
| Zic(Zf)/Cerebellum-ZIC1.2-ChIP-Seq(GSE60731)/Homer | 1e-22 | -5.200e+01 | 0.0000 | 81.0 | 12.13% | 1557.0 | 3.30% | motif file (matrix) |
svg |
18 |
| Eomes(T-box)/H9-Eomes-ChIP-Seq(GSE26097)/Homer | 1e-22 | -5.193e+01 | 0.0000 | 181.0 | 27.10% | 6006.4 | 12.74% | motif file (matrix) |
svg |
19 |
| GSC(Homeobox)/FrogEmbryos-GSC-ChIP-Seq(DRA000576)/Homer | 1e-22 | -5.156e+01 | 0.0000 | 133.0 | 19.91% | 3703.0 | 7.85% | motif file (matrix) |
svg |
20 |
| Otx2(Homeobox)/EpiLC-Otx2-ChIP-Seq(GSE56098)/Homer | 1e-17 | -4.098e+01 | 0.0000 | 94.0 | 14.07% | 2410.8 | 5.11% | motif file (matrix) |
svg |
21 |
| Tbx5(T-box)/HL1-Tbx5.biotin-ChIP-Seq(GSE21529)/Homer | 1e-14 | -3.367e+01 | 0.0000 | 198.0 | 29.64% | 8133.5 | 17.25% | motif file (matrix) |
svg |
22 |
| Tbet(T-box)/CD8-Tbet-ChIP-Seq(GSE33802)/Homer | 1e-14 | -3.226e+01 | 0.0000 | 87.0 | 13.02% | 2461.3 | 5.22% | motif file (matrix) |
svg |
23 |
| FOXM1(Forkhead)/MCF7-FOXM1-ChIP-Seq(GSE72977)/Homer | 1e-13 | -3.063e+01 | 0.0000 | 81.0 | 12.13% | 2265.1 | 4.80% | motif file (matrix) |
svg |
24 |
| Tbr1(T-box)/Cortex-Tbr1-ChIP-Seq(GSE71384)/Homer | 1e-12 | -2.912e+01 | 0.0000 | 107.0 | 16.02% | 3565.6 | 7.56% | motif file (matrix) |
svg |
25 |
| GATA:SCL(Zf,bHLH)/Ter119-SCL-ChIP-Seq(GSE18720)/Homer | 1e-11 | -2.560e+01 | 0.0000 | 22.0 | 3.29% | 233.1 | 0.49% | motif file (matrix) |
svg |
26 |
| Foxa2(Forkhead)/Liver-Foxa2-ChIP-Seq(GSE25694)/Homer | 1e-10 | -2.468e+01 | 0.0000 | 64.0 | 9.58% | 1773.4 | 3.76% | motif file (matrix) |
svg |
27 |
| FOXA1(Forkhead)/LNCAP-FOXA1-ChIP-Seq(GSE27824)/Homer | 1e-10 | -2.421e+01 | 0.0000 | 85.0 | 12.72% | 2768.2 | 5.87% | motif file (matrix) |
svg |
28 |
| FOXA1(Forkhead)/MCF7-FOXA1-ChIP-Seq(GSE26831)/Homer | 1e-10 | -2.395e+01 | 0.0000 | 72.0 | 10.78% | 2168.0 | 4.60% | motif file (matrix) |
svg |
29 |
| Fox:Ebox(Forkhead,bHLH)/Panc1-Foxa2-ChIP-Seq(GSE47459)/Homer | 1e-9 | -2.237e+01 | 0.0000 | 69.0 | 10.33% | 2107.3 | 4.47% | motif file (matrix) |
svg |
30 |
| YY1(Zf)/Promoter/Homer | 1e-9 | -2.089e+01 | 0.0000 | 14.0 | 2.10% | 107.1 | 0.23% | motif file (matrix) |
svg |
31 |
| FOXK1(Forkhead)/HEK293-FOXK1-ChIP-Seq(GSE51673)/Homer | 1e-8 | -1.846e+01 | 0.0000 | 70.0 | 10.48% | 2371.1 | 5.03% | motif file (matrix) |
svg |
32 |
| Foxa3(Forkhead)/Liver-Foxa3-ChIP-Seq(GSE77670)/Homer | 1e-7 | -1.621e+01 | 0.0000 | 28.0 | 4.19% | 607.0 | 1.29% | motif file (matrix) |
svg |
33 |
| Foxo1(Forkhead)/RAW-Foxo1-ChIP-Seq(Fan_et_al.)/Homer | 1e-5 | -1.305e+01 | 0.0000 | 102.0 | 15.27% | 4518.2 | 9.58% | motif file (matrix) |
svg |
34 |
| Tbox:Smad(T-box,MAD)/ESCd5-Smad2_3-ChIP-Seq(GSE29422)/Homer | 1e-4 | -1.151e+01 | 0.0001 | 17.0 | 2.54% | 337.4 | 0.72% | motif file (matrix) |
svg |
35 |
| TEAD4(TEA)/Tropoblast-Tead4-ChIP-Seq(GSE37350)/Homer | 1e-4 | -1.128e+01 | 0.0001 | 50.0 | 7.49% | 1839.0 | 3.90% | motif file (matrix) |
svg |
36 |
| Foxo3(Forkhead)/U2OS-Foxo3-ChIP-Seq(E-MTAB-2701)/Homer | 1e-4 | -1.108e+01 | 0.0002 | 48.0 | 7.19% | 1751.3 | 3.71% | motif file (matrix) |
svg |
37 |
| Pitx1(Homeobox)/Chicken-Pitx1-ChIP-Seq(GSE38910)/Homer | 1e-4 | -1.106e+01 | 0.0002 | 243.0 | 36.38% | 13602.3 | 28.85% | motif file (matrix) |
svg |
38 |
| Oct4:Sox17(POU,Homeobox,HMG)/F9-Sox17-ChIP-Seq(GSE44553)/Homer | 1e-4 | -1.063e+01 | 0.0002 | 14.0 | 2.10% | 255.2 | 0.54% | motif file (matrix) |
svg |
39 |
| Lhx3(Homeobox)/Neuron-Lhx3-ChIP-Seq(GSE31456)/Homer | 1e-3 | -8.280e+00 | 0.0024 | 100.0 | 14.97% | 4977.8 | 10.56% | motif file (matrix) |
svg |
40 |
| FoxL2(Forkhead)/Ovary-FoxL2-ChIP-Seq(GSE60858)/Homer | 1e-3 | -7.892e+00 | 0.0034 | 45.0 | 6.74% | 1844.5 | 3.91% | motif file (matrix) |
svg |
41 |
| Nanog(Homeobox)/mES-Nanog-ChIP-Seq(GSE11724)/Homer | 1e-3 | -7.847e+00 | 0.0035 | 213.0 | 31.89% | 12257.9 | 26.00% | motif file (matrix) |
svg |
42 |
| GATA3(Zf),DR4/iTreg-Gata3-ChIP-Seq(GSE20898)/Homer | 1e-3 | -7.649e+00 | 0.0041 | 12.0 | 1.80% | 263.9 | 0.56% | motif file (matrix) |
svg |
43 |
| Tcf12(bHLH)/GM12878-Tcf12-ChIP-Seq(GSE32465)/Homer | 1e-3 | -7.455e+00 | 0.0049 | 51.0 | 7.63% | 2215.8 | 4.70% | motif file (matrix) |
svg |
44 |
| E2A(bHLH),near_PU.1/Bcell-PU.1-ChIP-Seq(GSE21512)/Homer | 1e-3 | -7.069e+00 | 0.0070 | 66.0 | 9.88% | 3116.7 | 6.61% | motif file (matrix) |
svg |
45 |
| SCL(bHLH)/HPC7-Scl-ChIP-Seq(GSE13511)/Homer | 1e-3 | -6.989e+00 | 0.0075 | 221.0 | 33.08% | 12983.7 | 27.54% | motif file (matrix) |
svg |
46 |
| E2A(bHLH)/proBcell-E2A-ChIP-Seq(GSE21978)/Homer | 1e-3 | -6.966e+00 | 0.0075 | 69.0 | 10.33% | 3305.8 | 7.01% | motif file (matrix) |
svg |
47 |
| FOXP1(Forkhead)/H9-FOXP1-ChIP-Seq(GSE31006)/Homer | 1e-2 | -6.881e+00 | 0.0080 | 26.0 | 3.89% | 930.0 | 1.97% | motif file (matrix) |
svg |
48 |
| Foxf1(Forkhead)/Lung-Foxf1-ChIP-Seq(GSE77951)/Homer | 1e-2 | -6.649e+00 | 0.0098 | 45.0 | 6.74% | 1962.0 | 4.16% | motif file (matrix) |
svg |
49 |
| HEB(bHLH)/mES-Heb-ChIP-Seq(GSE53233)/Homer | 1e-2 | -6.086e+00 | 0.0169 | 84.0 | 12.57% | 4334.5 | 9.19% | motif file (matrix) |
svg |
50 |
| Atf3(bZIP)/GBM-ATF3-ChIP-Seq(GSE33912)/Homer | 1e-2 | -5.988e+00 | 0.0183 | 32.0 | 4.79% | 1311.2 | 2.78% | motif file (matrix) |
svg |
51 |
| Tcf4(HMG)/Hct116-Tcf4-ChIP-Seq(SRA012054)/Homer | 1e-2 | -5.718e+00 | 0.0235 | 27.0 | 4.04% | 1067.8 | 2.26% | motif file (matrix) |
svg |
52 |
| Fli1(ETS)/CD8-FLI-ChIP-Seq(GSE20898)/Homer | 1e-2 | -5.671e+00 | 0.0241 | 45.0 | 6.74% | 2068.3 | 4.39% | motif file (matrix) |
svg |
53 |
| Ascl1(bHLH)/NeuralTubes-Ascl1-ChIP-Seq(GSE55840)/Homer | 1e-2 | -5.494e+00 | 0.0282 | 70.0 | 10.48% | 3573.8 | 7.58% | motif file (matrix) |
svg |
54 |
| RXR(NR),DR1/3T3L1-RXR-ChIP-Seq(GSE13511)/Homer | 1e-2 | -5.486e+00 | 0.0282 | 50.0 | 7.49% | 2380.8 | 5.05% | motif file (matrix) |
svg |
55 |
| Nkx6.1(Homeobox)/Islet-Nkx6.1-ChIP-Seq(GSE40975)/Homer | 1e-2 | -5.173e+00 | 0.0375 | 141.0 | 21.11% | 8132.5 | 17.25% | motif file (matrix) |
svg |
56 |
| AP-1(bZIP)/ThioMac-PU.1-ChIP-Seq(GSE21512)/Homer | 1e-2 | -5.035e+00 | 0.0423 | 34.0 | 5.09% | 1513.0 | 3.21% | motif file (matrix) |
svg |
57 |
| FOXK2(Forkhead)/U2OS-FOXK2-ChIP-Seq(E-MTAB-2204)/Homer | 1e-2 | -4.831e+00 | 0.0510 | 32.0 | 4.79% | 1422.2 | 3.02% | motif file (matrix) |
svg |
58 |
| Lhx1(Homeobox)/EmbryoCarcinoma-Lhx1-ChIP-Seq(GSE70957)/Homer | 1e-2 | -4.753e+00 | 0.0541 | 64.0 | 9.58% | 3325.1 | 7.05% | motif file (matrix) |
svg |
59 |
| Bach2(bZIP)/OCILy7-Bach2-ChIP-Seq(GSE44420)/Homer | 1e-2 | -4.730e+00 | 0.0545 | 11.0 | 1.65% | 332.0 | 0.70% | motif file (matrix) |
svg |