Information for 8-ATWGTTAMTWTCCTTT (Motif 11)

C G T A A C G T G C A T A T C G C G A T A C G T C T G A G T C A A C G T C G A T C G A T A G T C A G T C A C G T A G C T A G C T
Reverse Opposite:
C T G A C T G A C G T A A C T G A C T G C G T A G C A T C G T A A C G T A G C T G T C A C G T A A T G C C G T A C G T A C G A T
p-value:1e-11
log p-value:-2.610e+01
Information Content per bp:1.773
Number of Target Sequences with motif5.0
Percentage of Target Sequences with motif0.75%
Number of Background Sequences with motif1.8
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets54.2 +/- 28.4bp
Average Position of motif in Background58.5 +/- 24.9bp
Strand Bias (log2 ratio + to - strand density)-0.6
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

SD0003.1_at_AC_acceptor/Jaspar

Match Rank:1
Score:0.65
Offset:4
Orientation:forward strand
Alignment:ATWGTTAMTWTCCTTT
----AAGATATCCTT-
 C G T A A C G T G C A T A T C G C G A T A C G T C T G A G T C A A C G T C G A T C G A T A G T C A G T C A C G T A G C T A G C T
A C G T A C G T A C G T A C G T G C T A G C T A T C A G C G T A A C G T C T G A C G A T A T G C G A T C G C A T A G C T A C G T

PH0121.1_Obox1/Jaspar

Match Rank:2
Score:0.62
Offset:0
Orientation:reverse strand
Alignment:ATWGTTAMTWTCCTTT-
NTAGTTAATCCCCTTAN
 C G T A A C G T G C A T A T C G C G A T A C G T C T G A G T C A A C G T C G A T C G A T A G T C A G T C A C G T A G C T A G C T A C G T
C T A G C G A T G C T A A C T G G C A T C G A T C G T A C T G A A C G T G T A C A G T C G A T C G A T C A G C T A G C T G C T A G C T A

PH0073.1_Hoxc9/Jaspar

Match Rank:3
Score:0.60
Offset:0
Orientation:reverse strand
Alignment:ATWGTTAMTWTCCTTT
NNAATTAATGACCNNN
 C G T A A C G T G C A T A T C G C G A T A C G T C T G A G T C A A C G T C G A T C G A T A G T C A G T C A C G T A G C T A G C T
T G C A G C A T C T G A C T G A C G A T A C G T C G T A C G T A A G C T A C T G C T G A A G T C G A T C A G C T G T A C A G T C

EWS:ERG-fusion(ETS)/CADO_ES1-EWS:ERG-ChIP-Seq(SRA014231)/Homer

Match Rank:4
Score:0.60
Offset:7
Orientation:forward strand
Alignment:ATWGTTAMTWTCCTTT-
-------ATTTCCTGTN
 C G T A A C G T G C A T A T C G C G A T A C G T C T G A G T C A A C G T C G A T C G A T A G T C A G T C A C G T A G C T A G C T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T T C G A A G C T A C G T A C G T A G T C A G T C A C G T A T C G G A C T A T C G

PH0122.1_Obox2/Jaspar

Match Rank:5
Score:0.58
Offset:0
Orientation:reverse strand
Alignment:ATWGTTAMTWTCCTTT-
ATAGTTAATCCCCCTCA
 C G T A A C G T G C A T A T C G C G A T A C G T C T G A G T C A A C G T C G A T C G A T A G T C A G T C A C G T A G C T A G C T A C G T
C T G A C A G T G C T A C A T G G C A T G C A T C G T A G C T A C A G T G T A C A G T C G A T C G A T C G A T C A G C T T G A C G C T A

Nur77(NR)/K562-NR4A1-ChIP-Seq(GSE31363)/Homer

Match Rank:6
Score:0.57
Offset:8
Orientation:forward strand
Alignment:ATWGTTAMTWTCCTTT----
--------TGACCTTTNCNT
 C G T A A C G T G C A T A T C G C G A T A C G T C T G A G T C A A C G T C G A T C G A T A G T C A G T C A C G T A G C T A G C T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T C T A G C G T A A G T C G T A C A C G T A C G T A C G T G T C A G T A C T G A C G A C T

PH0123.1_Obox3/Jaspar

Match Rank:7
Score:0.56
Offset:0
Orientation:reverse strand
Alignment:ATWGTTAMTWTCCTTT-
ATAGTTAATCCCCCNNA
 C G T A A C G T G C A T A T C G C G A T A C G T C T G A G T C A A C G T C G A T C G A T A G T C A G T C A C G T A G C T A G C T A C G T
C T G A C A G T G C T A C A T G G C A T G C A T C G T A G T C A C A G T G T A C G A T C G A T C G A T C A T G C A G C T T A G C C G T A

T1ISRE(IRF)/ThioMac-Ifnb-Expression/Homer

Match Rank:8
Score:0.55
Offset:6
Orientation:forward strand
Alignment:ATWGTTAMTWTCCTTT--
------ACTTTCGTTTCT
 C G T A A C G T G C A T A T C G C G A T A C G T C T G A G T C A A C G T C G A T C G A T A G T C A G T C A C G T A G C T A G C T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T T G C A A T G C A C G T A C G T A C G T A T G C C T A G A C G T A C G T A G C T G A T C A G C T

PB0012.1_Elf3_1/Jaspar

Match Rank:9
Score:0.55
Offset:5
Orientation:reverse strand
Alignment:ATWGTTAMTWTCCTTT--
-----TTACTTCCTNGTN
 C G T A A C G T G C A T A T C G C G A T A C G T C T G A G T C A A C G T C G A T C G A T A G T C A G T C A C G T A G C T A G C T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T G C A T C T G A A G T C C G A T A C G T G A T C A G T C A C G T A C G T C A T G G C A T G C A T

PH0061.1_Hoxb6/Jaspar

Match Rank:10
Score:0.55
Offset:-1
Orientation:forward strand
Alignment:-ATWGTTAMTWTCCTTT
TATTGGTAATTACCTT-
 A C G T C G T A A C G T G C A T A T C G C G A T A C G T C T G A G T C A A C G T C G A T C G A T A G T C A G T C A C G T A G C T A G C T
G C A T G C T A C A G T C A G T A T C G A C T G A G C T G T C A C G T A C G A T C A G T C T G A G T A C T A G C C A G T A G C T A C G T