Information for 9-AGAAACACATCTCCCA (Motif 13)

C G T A C A T G C G T A C T G A G T C A G T A C T C G A A G T C C G T A A C G T A G T C A C G T A T G C A G T C T A G C T C G A
Reverse Opposite:
A C G T A C T G C T A G T A C G G T C A C T A G G T C A C G A T A C T G A G C T A C T G C A G T A G C T A C G T G T A C C G A T
p-value:1e-11
log p-value:-2.589e+01
Information Content per bp:1.715
Number of Target Sequences with motif7.0
Percentage of Target Sequences with motif1.05%
Number of Background Sequences with motif6.0
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets68.4 +/- 21.5bp
Average Position of motif in Background57.1 +/- 18.9bp
Strand Bias (log2 ratio + to - strand density)0.4
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

RUNX-AML(Runt)/CD4+-PolII-ChIP-Seq(Barski_et_al.)/Homer

Match Rank:1
Score:0.59
Offset:1
Orientation:reverse strand
Alignment:AGAAACACATCTCCCA
-AAACCACAGC-----
 C G T A C A T G C G T A C T G A G T C A G T A C T C G A A G T C C G T A A C G T A G T C A C G T A T G C A G T C T A G C T C G A
A C G T G C T A T C G A T G C A T G A C G T A C T G C A A G T C C T G A C T A G T G A C A C G T A C G T A C G T A C G T A C G T

RUNX1(Runt)/Jurkat-RUNX1-ChIP-Seq(GSE29180)/Homer

Match Rank:2
Score:0.58
Offset:1
Orientation:forward strand
Alignment:AGAAACACATCTCCCA
-AAACCACANN-----
 C G T A C A T G C G T A C T G A G T C A G T A C T C G A A G T C C G T A A C G T A G T C A C G T A T G C A G T C T A G C T C G A
A C G T G C T A C T G A T C G A A G T C A G T C C T G A A G T C G T C A C T G A T G C A A C G T A C G T A C G T A C G T A C G T

Ronin(THAP)/ES-Thap11-ChIP-Seq(GSE51522)/Homer

Match Rank:3
Score:0.54
Offset:2
Orientation:forward strand
Alignment:AGAAACACATCTCCCA------
--RACTACAACTCCCAGVAKGC
 C G T A C A T G C G T A C T G A G T C A G T A C T C G A A G T C C G T A A C G T A G T C A C G T A T G C A G T C T A G C T C G A A C G T A C G T A C G T A C G T A C G T A C G T
A C G T A C G T T C A G C G T A A G T C A G C T C G T A A G T C C T G A C G T A A G T C G C A T A G T C A G T C A G T C C T G A A C T G T G C A T C G A C A T G A T C G G A T C

RUNX(Runt)/HPC7-Runx1-ChIP-Seq(GSE22178)/Homer

Match Rank:4
Score:0.54
Offset:0
Orientation:forward strand
Alignment:AGAAACACATCTCCCA
NAAACCACAG------
 C G T A C A T G C G T A C T G A G T C A G T A C T C G A A G T C C G T A A C G T A G T C A C G T A T G C A G T C T A G C T C G A
T A G C G C T A T C G A C T G A A G T C A G T C C T G A A G T C C G T A C T A G A C G T A C G T A C G T A C G T A C G T A C G T

Gfi1b/MA0483.1/Jaspar

Match Rank:5
Score:0.54
Offset:1
Orientation:forward strand
Alignment:AGAAACACATCTCCCA
-AAATCACAGCA----
 C G T A C A T G C G T A C T G A G T C A G T A C T C G A A G T C C G T A A C G T A G T C A C G T A T G C A G T C T A G C T C G A
A C G T T G C A C G T A C T G A A G C T A G T C G C T A T A G C C G T A C T A G G A T C G C T A A C G T A C G T A C G T A C G T

GFY-Staf(?,Zf)/Promoter/Homer

Match Rank:6
Score:0.54
Offset:2
Orientation:forward strand
Alignment:AGAAACACATCTCCCA------
--AACTACAATTCCCAGAATGC
 C G T A C A T G C G T A C T G A G T C A G T A C T C G A A G T C C G T A A C G T A G T C A C G T A T G C A G T C T A G C T C G A A C G T A C G T A C G T A C G T A C G T A C G T
A C G T A C G T T C G A C G T A A G T C A G C T C G T A A G T C T C G A G C T A G A C T C G A T A G T C A G T C A G T C C T G A T C A G T G C A T C G A C A G T A T C G A G T C

NHLH1/MA0048.2/Jaspar

Match Rank:7
Score:0.53
Offset:5
Orientation:forward strand
Alignment:AGAAACACATCTCCCA
-----CGCAGCTGCG-
 C G T A C A T G C G T A C T G A G T C A G T A C T C G A A G T C C G T A A C G T A G T C A C G T A T G C A G T C T A G C T C G A
A C G T A C G T A C G T A C G T A C G T T G A C T C A G G T A C T G C A A T C G T A G C A C G T T A C G G A T C A C T G A C G T

E2A(bHLH)/proBcell-E2A-ChIP-Seq(GSE21978)/Homer

Match Rank:8
Score:0.53
Offset:4
Orientation:forward strand
Alignment:AGAAACACATCTCCCA
----NNACAGCTGC--
 C G T A C A T G C G T A C T G A G T C A G T A C T C G A A G T C C G T A A C G T A G T C A C G T A T G C A G T C T A G C T C G A
A C G T A C G T A C G T A C G T C G T A T G A C T C G A A G T C C G T A A T C G A T G C A C G T A C T G A G T C A C G T A C G T

RUNX2(Runt)/PCa-RUNX2-ChIP-Seq(GSE33889)/Homer

Match Rank:9
Score:0.53
Offset:0
Orientation:forward strand
Alignment:AGAAACACATCTCCCA
NWAACCACADNN----
 C G T A C A T G C G T A C T G A G T C A G T A C T C G A A G T C C G T A A C G T A G T C A C G T A T G C A G T C T A G C T C G A
T G A C G C T A T C G A T G C A A G T C A G T C C G T A A G T C C G T A C T G A G C T A G T A C A C G T A C G T A C G T A C G T

Foxf1(Forkhead)/Lung-Foxf1-ChIP-Seq(GSE77951)/Homer

Match Rank:10
Score:0.53
Offset:-4
Orientation:forward strand
Alignment:----AGAAACACATCTCCCA
WWATRTAAACAN--------
 A C G T A C G T A C G T A C G T C G T A C A T G C G T A C T G A G T C A G T A C T C G A A G T C C G T A A C G T A G T C A C G T A T G C A G T C T A G C T C G A
G C A T G C A T C T G A A C G T C T G A A C G T C G T A C G T A C G T A A G T C G T C A G T C A A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T