Information for 24-CSYGGWACWASSA (Motif 28)

A G T C A T C G A G T C A C T G A C T G C G A T C G T A A G T C C G A T C G T A A T G C A T C G C G T A
Reverse Opposite:
A C G T A T G C A T C G A C G T C G T A A C T G A C G T C G T A A G T C A G T C C T A G A T G C C T A G
p-value:1e-6
log p-value:-1.458e+01
Information Content per bp:1.826
Number of Target Sequences with motif3.0
Percentage of Target Sequences with motif0.45%
Number of Background Sequences with motif0.6
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets42.2 +/- 28.3bp
Average Position of motif in Background36.0 +/- 11.4bp
Strand Bias (log2 ratio + to - strand density)0.0
Multiplicity (# of sites on avg that occur together)1.33
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Sox4(HMG)/proB-Sox4-ChIP-Seq(GSE50066)/Homer

Match Rank:1
Score:0.58
Offset:3
Orientation:reverse strand
Alignment:CSYGGWACWASSA
---GGAACAAAGR
 A G T C A T C G A G T C A C T G A C T G C G A T C G T A A G T C C G A T C G T A A T G C A T C G C G T A
A C G T A C G T A C G T T C A G T C A G T C G A C G T A A G T C C G T A C G T A C G T A A C T G T C A G

EHF/MA0598.2/Jaspar

Match Rank:2
Score:0.57
Offset:-2
Orientation:forward strand
Alignment:--CSYGGWACWASSA
AACCCGGAAGTA---
 A C G T A C G T A G T C A T C G A G T C A C T G A C T G C G A T C G T A A G T C C G A T C G T A A T G C A T C G C G T A
G C T A G C T A T A G C T A G C T G A C T C A G A C T G G T C A T G C A T C A G G A C T C T G A A C G T A C G T A C G T

AR-halfsite(NR)/LNCaP-AR-ChIP-Seq(GSE27824)/Homer

Match Rank:3
Score:0.57
Offset:0
Orientation:forward strand
Alignment:CSYGGWACWASSA
CCAGGAACAG---
 A G T C A T C G A G T C A C T G A C T G C G A T C G T A A G T C C G A T C G T A A T G C A T C G C G T A
T A G C G T A C C G T A C T A G A C T G T G C A C G T A A T G C C G T A A T C G A C G T A C G T A C G T

ELF3/MA0640.1/Jaspar

Match Rank:4
Score:0.54
Offset:-2
Orientation:forward strand
Alignment:--CSYGGWACWASSA
AACCCGGAAGTAA--
 A C G T A C G T A G T C A T C G A G T C A C T G A C T G C G A T C G T A A G T C C G A T C G T A A T G C A T C G C G T A
G C T A G C T A T A G C T A G C T G A C C T A G A C T G T C G A G C T A C T A G G A C T C T G A C T G A A C G T A C G T

ELF4/MA0641.1/Jaspar

Match Rank:5
Score:0.53
Offset:-2
Orientation:forward strand
Alignment:--CSYGGWACWASSA
AACCCGGAAGTG---
 A C G T A C G T A G T C A T C G A G T C A C T G A C T G C G A T C G T A A G T C C G A T C G T A A T G C A T C G C G T A
C G T A G C T A G T A C T A G C T G A C C T A G A C T G C G T A G T C A T C A G A G C T C T A G A C G T A C G T A C G T

ELF5/MA0136.2/Jaspar

Match Rank:6
Score:0.53
Offset:-1
Orientation:forward strand
Alignment:-CSYGGWACWASSA
ACCCGGAAGTA---
 A C G T A G T C A T C G A G T C A C T G A C T G C G A T C G T A A G T C C G A T C G T A A T G C A T C G C G T A
C G T A T G A C T A G C T G A C C A T G C A T G G T C A G C T A T C A G G A C T C T G A A C G T A C G T A C G T

PB0011.1_Ehf_1/Jaspar

Match Rank:7
Score:0.53
Offset:-4
Orientation:forward strand
Alignment:----CSYGGWACWASSA
AGGACCCGGAAGTAA--
 A C G T A C G T A C G T A C G T A G T C A T C G A G T C A C T G A C T G C G A T C G T A A G T C C G A T C G T A A T G C A T C G C G T A
T G C A A C T G C A T G C G T A A G T C T A G C T G A C C T A G A C T G C G T A C G T A T C A G G A C T C G T A C T G A A C G T A C G T

ELF1/MA0473.2/Jaspar

Match Rank:8
Score:0.53
Offset:-2
Orientation:forward strand
Alignment:--CSYGGWACWASSA
AACCCGGAAGTG---
 A C G T A C G T A G T C A T C G A G T C A C T G A C T G C G A T C G T A A G T C C G A T C G T A A T G C A T C G C G T A
C G T A G C T A G T A C T A G C G T A C A C T G A C T G C T G A G C T A C T A G G A C T T C A G A C G T A C G T A C G T

PB0152.1_Nkx3-1_2/Jaspar

Match Rank:9
Score:0.52
Offset:-3
Orientation:forward strand
Alignment:---CSYGGWACWASSA-
ACTCCAAGTACTTGGAA
 A C G T A C G T A C G T A G T C A T C G A G T C A C T G A C T G C G A T C G T A A G T C C G A T C G T A A T G C A T C G C G T A A C G T
T C G A G T A C C G A T A T G C T A G C C T G A C T G A C A T G A G C T T C G A G T A C G A C T G A C T A C T G T C A G T G C A G T C A

NFATC1/MA0624.1/Jaspar

Match Rank:10
Score:0.52
Offset:0
Orientation:reverse strand
Alignment:CSYGGWACWASSA
NNTGGAAANN---
 A G T C A T C G A G T C A C T G A C T G C G A T C G T A A G T C C G A T C G T A A T G C A T C G C G T A
C G T A C T G A G A C T C T A G A C T G C T G A C T G A G C T A C G T A G C A T A C G T A C G T A C G T